The persistence of bacterial diversity and ecosystem multifunctionality along a disturbance intensity gradient in karst soil

Long term effects of management practice intensification on soil microbial community structure and co-occurrence network in a non-timber plantation

(2020) Liang Xue et al.   FOREST ECOLOGY AND MANAGEMENT

Earth microbial co-occurrence network reveals interconnection pattern across microbiomes

(2020) Bin Ma et al.   Microbiome

Climate–land-use interactions shape tropical mountain biodiversity and ecosystem functions

(2019) Marcell K. Peters et al.   NATURE

Soil functions and ecosystem services research in the Chinese karst Critical Zone

(2019) Sophie M. Green et al.   CHEMICAL GEOLOGY

Soil enzyme activity and stoichiometry along a gradient of vegetation restoration at the Karst Critical Zone Observatory in Southwest China

(2019) Zhiming Guo et al.   LAND DEGRADATION & DEVELOPMENT

Persistence of soil microbial function at the rock‐soil interface in degraded karst topsoils

(2019) Ying Wang et al.   LAND DEGRADATION & DEVELOPMENT

Soil microbial processes and resource limitation in karst and non-karst forests

(2018) Hao Chen et al.   FUNCTIONAL ECOLOGY

Dynamics of soil nitrogen availability during post-agricultural succession in a karst region, southwest China

(2018) Kongcao Xiao et al.   GEODERMA

Nitrogen functional gene activity in soil profiles under progressive vegetative recovery after abandonment of agriculture at the Puding Karst Critical Zone Observatory, SW China

(2018) Dandan Li et al.   SOIL BIOLOGY & BIOCHEMISTRY

Deforestation decreases spatial turnover and alters the network interactions in soil bacterial communities

(2018) Jing Tian et al.   SOIL BIOLOGY & BIOCHEMISTRY

Redefining ecosystem multifunctionality

(2018) Peter Manning et al.   Nature Ecology & Evolution

Land use driven change in soil pH affects microbial carbon cycling processes

(2018) Ashish A. Malik et al.   Nature Communications

Origin and Evolution of Flavin-Based Electron Bifurcating Enzymes

(2018) Saroj Poudel et al.   Frontiers in Microbiology

Large heterogeneity of water and nutrient supply derived from runoff of nearby rock outcrops in karst ecosystems in SW China

(2018) Youxin Shen et al.   CATENA

Secondary successional forests undergo tightly-coupled changes in soil microbial community structure and soil organic matter

(2018) Pengshuai Shao et al.   SOIL BIOLOGY & BIOCHEMISTRY

Karst rocky desertification progress: Soil calcium as a possible driving force

(2018) Jing Tang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Soil bacterial community response to vegetation succession after fencing in the grassland of China

(2017) Quanchao Zeng et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Consequences of tropical forest conversion to oil palm on soil bacterial community and network structure

(2017) Stephen A. Wood et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil Bacterial Community Structure and Co-occurrence Pattern during Vegetation Restoration in Karst Rocky Desertification Area

(2017) Liang Xue et al.   Frontiers in Microbiology

The interconnected rhizosphere: High network complexity dominates rhizosphere assemblages

(2016) Shengjing Shi et al.   ECOLOGY LETTERS

Coordinated pattern of multi-element variability in leaves and roots across Chinese forest biomes

(2016) Ning Zhao et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

The active microbial diversity drives ecosystem multifunctionality and is physiologically related to carbon availability in Mediterranean semi-arid soils

(2016) Felipe Bastida et al.   MOLECULAR ECOLOGY

Substrate quality affects kinetics and catalytic efficiency of exo-enzymes in rhizosphere and detritusphere

(2016) Sebastian Loeppmann et al.   SOIL BIOLOGY & BIOCHEMISTRY

Comparative genomic and functional analysis reveal conservation of plant growth promoting traits in Paenibacillus polymyxa and its closely related species

(2016) Jianbo Xie et al.   Scientific Reports

Land use intensification alters ecosystem multifunctionality via loss of biodiversity and changes to functional composition

(2015) Eric Allan et al.   ECOLOGY LETTERS

Network succession reveals the importance of competition in response to emulsified vegetable oil amendment for uranium bioremediation

(2015) Ye Deng et al.   ENVIRONMENTAL MICROBIOLOGY

Refining the phylum Chlorobi by resolving the phylogeny and metabolic potential of the representative of a deeply branching, uncultivated lineage

(2015) Jennifer Hiras et al.   ISME Journal

Microbial community structure and resource availability drive the catalytic efficiency of soil enzymes under land-use change conditions

(2015) Alexander Tischer et al.   SOIL BIOLOGY & BIOCHEMISTRY

Shifts in the microbial community structure explain the response of soil respiration to land-use change but not to climate warming

(2015) Loïc Nazaries et al.   SOIL BIOLOGY & BIOCHEMISTRY

Shifts in microbial diversity through land use intensity as drivers of carbon mineralization in soil

(2015) Vincent Tardy et al.   SOIL BIOLOGY & BIOCHEMISTRY

The Mineralosphere Concept: Mineralogical Control of the Distribution and Function of Mineral-associated Bacterial Communities

(2015) Stephane Uroz et al.   TRENDS IN MICROBIOLOGY

Over 150 Years of Long-Term Fertilization Alters Spatial Scaling of Microbial Biodiversity

(2015) Yuting Liang et al.   mBio

The links between ecosystem multifunctionality and above- and belowground biodiversity are mediated by climate

(2015) Xin Jing et al.   Nature Communications

Rocks create nitrogen hotspots and N:P heterogeneity by funnelling rain

(2014) Hans Göransson et al.   BIOGEOCHEMISTRY

Significance of preferential flow at the rock soil interface in a semi-arid karst environment

(2014) Jakob Sohrt et al.   CATENA

Distinct soil microbial diversity under long-term organic and conventional farming

(2014) Martin Hartmann et al.   ISME Journal

Discontinuity in the responses of ecosystem processes and multifunctionality to altered soil community composition

(2014) Mark A. Bradford et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

High throughput sequencing analysis of biogeographical distribution of bacterial communities in the black soils of northeast China

(2014) Junjie Liu et al.   SOIL BIOLOGY & BIOCHEMISTRY

Pyrosequencing evidences the impact of cropping on soil bacterial and fungal diversity in Laos tropical grassland

(2013) Pascal Lienhard et al.   Agronomy for Sustainable Development

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Environmental Factors Affect Acidobacterial Communities below the Subgroup Level in Grassland and Forest Soils

(2012) Astrid Naether et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Molecular ecological network analyses

(2012) Ye Deng et al.   BMC BIOINFORMATICS

Interactions of vegetation succession, soil bio-chemical properties and microbial communities in a Karst ecosystem

(2012) Hanhua Zhu et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Diversity of Interaction Types and Ecological Community Stability

(2012) A. Mougi et al.   SCIENCE

Plant Species Richness and Ecosystem Multifunctionality in Global Drylands

(2012) F. T. Maestre et al.   SCIENCE

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Phylogenetic Molecular Ecological Network of Soil Microbial Communities in Response to Elevated CO2

(2011) J. Zhou et al.   mBio

Considering fungal:bacterial dominance in soils – Methods, controls, and ecosystem implications

(2010) Michael S. Strickland et al.   SOIL BIOLOGY & BIOCHEMISTRY

The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems

(2008) Marcel G. A. van der Heijden et al.   ECOLOGY LETTERS

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

(2008) J. R. Cole et al.   NUCLEIC ACIDS RESEARCH