Integrated genomic profiling and modelling for risk stratification in patients with advanced oesophagogastric adenocarcinoma

A population-based study on intestinal and diffuse type adenocarcinoma of the oesophagus and stomach in the Netherlands between 1989 and 2015

(2020) Rosa T. van der Kaaij et al.   EUROPEAN JOURNAL OF CANCER

Global Burden of 5 Major Types Of Gastrointestinal Cancer

(2020) Melina Arnold et al.   GASTROENTEROLOGY

Association Between Spatial Heterogeneity Within Nonmetastatic Gastroesophageal Adenocarcinomas and Survival

(2020) Joseph Chao et al.   JAMA Network Open

The landscape of selection in 551 esophageal adenocarcinomas defines genomic biomarkers for the clinic

(2019) Alexander M. Frankell et al.   NATURE GENETICS

Characterizing Mutational Signatures in Human Cancer Cell Lines Reveals Episodic APOBEC Mutagenesis

(2019) Mia Petljak et al.   CELL

Transcriptomic profiling reveals three molecular phenotypes of adenocarcinoma at the gastroesophageal junction

(2019) Jan Bornschein et al.   INTERNATIONAL JOURNAL OF CANCER

Integrated transcriptomic–genomic tool Texomer profiles cancer tissues

(2019) Fang Wang et al.   NATURE METHODS

The MAP3K13-TRIM25-FBXW7α axis affects c-Myc protein stability and tumor development

(2019) Qiang Zhang et al.   CELL DEATH AND DIFFERENTIATION

Esophageal and Esophagogastric Junction Cancers, Version 2.2019, NCCN Clinical Practice Guidelines in Oncology

(2019) Jaffer A. Ajani et al.   Journal of the National Comprehensive Cancer Network

RNA editing in the forefront of epitranscriptomics and human health

(2019) Theodoulakis Christofi et al.   Journal of Translational Medicine

Expression of cancer stem cell markers is prognostic in metastatic gastroesophageal adenocarcinoma

(2019) Daniel Brungs et al.   PATHOLOGY

Ado-trastuzumab emtansine (T-DM1) in patients with HER2-amplified tumors excluding breast and gastric/gastroesophageal junction (GEJ) adenocarcinomas: results from the NCI-MATCH trial (EAY131) subprotocol Q

(2019) K L Jhaveri et al.   ANNALS OF ONCOLOGY

Molecular landscape of esophageal cancer: implications for early detection and personalized therapy

(2018) Fazlur Rahman Talukdar et al.   Annals of the New York Academy of Sciences

CXCL9, CXCL10, CXCL11/CXCR3 axis for immune activation – A target for novel cancer therapy

(2018) Ryuma Tokunaga et al.   CANCER TREATMENT REVIEWS

Targeted Therapies for Targeted Populations: Anti-EGFR Treatment for EGFR -Amplified Gastroesophageal Adenocarcinoma

(2018) Steven B. Maron et al.   Cancer Discovery

GLOBOCAN 2018: counting the toll of cancer

(2018) The Lancet   LANCET

YAP1-mediated CDK6 Activation Confers Radiation Resistance in Esophageal Cancer - Rationale for the combination of YAP1 and CDK4/6 inhibitors in Esophageal Cancer

(2018) Fan Li et al.   CLINICAL CANCER RESEARCH

Analysis of Circulating Tumor DNA and Clinical Correlates in Patients with Esophageal, Gastroesophageal Junction, and Gastric Adenocarcinoma

(2018) Shumei Kato et al.   CLINICAL CANCER RESEARCH

Identification of Prognostic Phenotypes of Esophageal Adenocarcinoma in 2 Independent Cohorts

(2018) Tarek Sawas et al.   GASTROENTEROLOGY

COSMIC: the Catalogue Of Somatic Mutations In Cancer

(2018) John G Tate et al.   NUCLEIC ACIDS RESEARCH

APOBEC-related mutagenesis and neo-peptide hydrophobicity: implications for response to immunotherapy

(2018) Amélie Boichard et al.   OncoImmunology

Identification of distinct mutational patterns and new driver genes in oesophageal squamous cell carcinomas and adenocarcinomas

(2017) De-Chen Lin et al.   GUT

Integrated genomic characterization of oesophageal carcinoma

(2017)   NATURE

Tumor aneuploidy correlates with markers of immune evasion and with reduced response to immunotherapy

(2017) Teresa Davoli et al.   SCIENCE

Genetic Predictors of Response to Systemic Therapy in Esophagogastric Cancer

(2017) Yelena Y. Janjigian et al.   Cancer Discovery

Gastric adenocarcinoma

(2017) Jaffer A. Ajani et al.   Nature Reviews Disease Primers

SciClone: Inferring Clonal Architecture and Tracking the Spatial and Temporal Patterns of Tumor Evolution

(2014) Christopher A. Miller et al.   PLoS Computational Biology

MSIsensor: microsatellite instability detection using paired tumor-normal sequence data

(2013) Beifang Niu et al.   BIOINFORMATICS

Evidence for APOBEC3B mutagenesis in multiple human cancers

(2013) Michael B Burns et al.   NATURE GENETICS

An APOBEC cytidine deaminase mutagenesis pattern is widespread in human cancers

(2013) Steven A Roberts et al.   NATURE GENETICS

Deleterious Mutations in LRBA Are Associated with a Syndrome of Immune Deficiency and Autoimmunity

(2012) Gabriela Lopez-Herrera et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Mutational Processes Molding the Genomes of 21 Breast Cancers

(2012) Serena Nik-Zainal et al.   CELL