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Coral reef survival under accelerating ocean deoxygenation

(2020) David J. Hughes et al.   Nature Climate Change

Oxygen-sensing mechanisms across eukaryotic kingdoms and their roles in complex multicellularity

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SymPortal: a novel analytical framework and platform for coral algal symbiont next-generation sequencing ITS2 profiling

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Loss of the HIF pathway in a widely distributed intertidal crustacean, the copepodTigriopus californicus

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Establishment of Coral-Bacteria Symbioses Reveal Changes in the Core Bacterial Community With Host Ontogeny

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Mangrove lagoons of the Great Barrier Reef support coral populations persisting under extreme environmental conditions

(2019) EF Camp et al.   MARINE ECOLOGY PROGRESS SERIES

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Coral bleaching patterns are the outcome of complex biological and environmental networking

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Down to the bone: the role of overlooked endolithic microbiomes in reef coral health

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Beneath the surface: community assembly and functions of the coral skeleton microbiome

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Diel modulation of Hsp70 and Hsp60 in corals living in a shallow reef

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Declining oxygen in the global ocean and coastal waters

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Spatial and temporal patterns of mass bleaching of corals in the Anthropocene

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The last common ancestor of animals lacked the HIF pathway and respired in low-oxygen environments

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Systematic Revision of Symbiodiniaceae Highlights the Antiquity and Diversity of Coral Endosymbionts

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Transcriptional response of the heat shock gene hsp70 aligns with differences in stress susceptibility of shallow-water corals from the Mediterranean Sea

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Partner switching and metabolic flux in a model cnidarian–dinoflagellate symbiosis

(2018) Jennifer L. Matthews et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Symbiodinium mitigate the combined effects of hypoxia and acidification on a noncalcifying cnidarian

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Decline in global oceanic oxygen content during the past five decades

(2017) Sunke Schmidtko et al.   NATURE

Global warming and recurrent mass bleaching of corals

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Hypoxia Sensing in Plants: On a Quest for Ion Channels as Putative Oxygen Sensors

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Oxygen Sensing and Integrative Stress Signaling in Plants

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Structural and functional analysis of coral Hypoxia Inducible Factor

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Physiological plasticity related to zonation affects hsp70 expression in the reef-building coral Pocillopora verrucosa

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(2017) Andrew H. Altieri et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial community dynamics are linked to patterns of coral heat tolerance

(2017) Maren Ziegler et al.   Nature Communications

New interventions are needed to save coral reefs

(2017) Ken Anthony et al.   Nature Ecology & Evolution

Reef-building corals thrive within hot-acidified and deoxygenated waters

(2017) Emma F. Camp et al.   Scientific Reports

Transcriptomes and expression profiling of deep-sea corals from the Red Sea provide insight into the biology of azooxanthellate corals

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Origin and evolution of metabolic sub-cellular compartmentalization in eukaryotes

(2015) Toni Gabaldón et al.   BIOCHIMIE

Transcriptome-wide Changes in Coral Gene Expression at Noon and Midnight Under Field Conditions

(2015) Lupita J. Ruiz-Jones et al.   BIOLOGICAL BULLETIN

Interplay between receptor tyrosine kinases and hypoxia signaling in cancer

(2015) Astrid A. Glück et al.   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY

The role of transcriptome resilience in resistance of corals to bleaching

(2015) Francois O. Seneca et al.   MOLECULAR ECOLOGY

HSP70 induced by HIF-1 ALFA regurates anabolic responses in chondrocytes under hypoxic conditions

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The “Flexi-Chamber”: A Novel Cost-Effective In Situ Respirometry Chamber for Coral Physiological Measurements

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HIF-1α–Mediated Upregulation of TASK-2 K+Channels Augments Ca2+Signaling in Mouse B Cells under Hypoxia

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Gene expression under chronic heat stress in populations of the mustard hill coral (Porites astreoides ) from different thermal environments

(2013) C. D. Kenkel et al.   MOLECULAR ECOLOGY

Heat-Stress and Light-Stress Induce Different Cellular Pathologies in the Symbiotic Dinoflagellate during Coral Bleaching

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Thermal Stress Promotes Host Mitochondrial Degradation in Symbiotic Cnidarians: Are the Batteries of the Reef Going to Run Out?

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Coral Thermal Tolerance: Tuning Gene Expression to Resist Thermal Stress

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Transcriptional integration of mitochondrial biogenesis

(2012) Richard C. Scarpulla et al.   TRENDS IN ENDOCRINOLOGY AND METABOLISM

Transcriptomic responses to darkness stress point to common coral bleaching mechanisms

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Molecular Evolution of the Metazoan PHD–HIF Oxygen-Sensing System

(2011) Kalle T. Rytkönen et al.   MOLECULAR BIOLOGY AND EVOLUTION

Regulation of Apoptotic Mediators Reveals Dynamic Responses to Thermal Stress in the Reef Building Coral Acropora millepora

(2011) Mathieu Pernice et al.   PLoS One

Differential Responses of the Coral Host and Their Algal Symbiont to Thermal Stress

(2011) William Leggat et al.   PLoS One

Complex Diel Cycles of Gene Expression in Coral-Algal Symbiosis

(2011) O. Levy et al.   SCIENCE

Increasing the accuracy of surface area estimation using single wax dipping of coral fragments

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The hypoxia-inducible transcription factor pathway regulates oxygen sensing in the simplest animal, Trichoplax adhaerens

(2010) Christoph Loenarz et al.   EMBO REPORTS

Ocean Deoxygenation in a Warming World

(2009) Ralph F. Keeling et al.   Annual Review of Marine Science

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Role of BNIP3 and NIX in cell death, autophagy and mitophagy

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Hsp70 and CHIP Selectively Mediate Ubiquitination and Degradation of Hypoxia-inducible Factor (HIF)-1α but Not HIF-2α

(2009) Weibo Luo et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Transcriptomic responses to heat stress and bleaching in the elkhorn coral Acropora palmata

(2009) MK DeSalvo et al.   MARINE ECOLOGY PROGRESS SERIES

An integrative genomics approach identifies Hypoxia Inducible Factor-1 (HIF-1)-target genes that form the core response to hypoxia

(2009) Yair Benita et al.   NUCLEIC ACIDS RESEARCH

Repetitive Hypoxic Preconditioning Attenuates Renal Ischemia/Reperfusion Induced Oxidative Injury via Upregulating HIF-1α–Dependent bcl-2 Signaling

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Escaping the heat: range shifts of reef coral taxa in coastal Western Australia

(2008) BENJAMIN J. GREENSTEIN et al.   GLOBAL CHANGE BIOLOGY

Cellular mechanisms of Cnidarian bleaching: stress causes the collapse of symbiosis

(2008) V. M. Weis   JOURNAL OF EXPERIMENTAL BIOLOGY

IMAGING OF OXYGEN DYNAMICS WITHIN THE ENDOLITHIC ALGAL COMMUNITY OF THE MASSIVE CORALPORITES LOBATA

(2008) Michael Kühl et al.   JOURNAL OF PHYCOLOGY

Oxygen Sensing by Metazoans: The Central Role of the HIF Hydroxylase Pathway

(2008) William G. Kaelin et al.   MOLECULAR CELL

Differential gene expression during thermal stress and bleaching in the Caribbean coralMontastraea faveolata

(2008) M. K. DESALVO et al.   MOLECULAR ECOLOGY

Ecological extinction and evolution in the brave new ocean

(2008) J. B. C. Jackson   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA