SARS-CoV-2 Codon Usage Bias Downregulates Host Expressed Genes With Similar Codon Usage
出版年份 2020 全文链接
标题
SARS-CoV-2 Codon Usage Bias Downregulates Host Expressed Genes With Similar Codon Usage
作者
关键词
-
出版物
Frontiers in Cell and Developmental Biology
Volume 8, Issue -, Pages -
出版商
Frontiers Media SA
发表日期
2020-08-20
DOI
10.3389/fcell.2020.00831
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China
- (2020) Chaolin Huang et al. LANCET
- Dissimilation of synonymous codon usage bias in virus–host coevolution due to translational selection
- (2020) Feng Chen et al. Nature Ecology & Evolution
- Imbalanced Host Response to SARS-CoV-2 Drives Development of COVID-19
- (2020) Daniel Blanco-Melo et al. CELL
- Proteomic and Metabolomic Characterization of COVID-19 Patient Sera
- (2020) Bo Shen et al. CELL
- From SARS and MERS CoVs to SARS‐CoV‐2: Moving toward more biased codon usage in viral structural and nonstructural genes
- (2020) Mahmoud Kandeel et al. JOURNAL OF MEDICAL VIROLOGY
- Proteomics of SARS-CoV-2-infected host cells reveals therapy targets
- (2020) Denisa Bojkova et al. NATURE
- SARS-CoV-2 and COVID-19 in older adults: what we may expect regarding pathogenesis, immune responses, and outcomes
- (2020) Janko Nikolich-Zugich et al. GeroScience
- Natural Selection Shapes Codon Usage in the Human Genome
- (2020) Ryan S. Dhindsa et al. AMERICAN JOURNAL OF HUMAN GENETICS
- Synonymous variants in holoprosencephaly alter codon usage and impact the Sonic Hedgehog protein
- (2020) Artem Kim et al. BRAIN
- Structural basis for translational shutdown and immune evasion by the Nsp1 protein of SARS-CoV-2
- (2020) Matthias Thoms et al. SCIENCE
- Alpha-2-Macroglobulin, a Hypochlorite-Regulated Chaperone and Immune System Modulator
- (2019) Jordan H. Cater et al. Oxidative Medicine and Cellular Longevity
- Codon usage of highly expressed genes affects proteome-wide translation efficiency
- (2018) Idan Frumkin et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Noncanonical Translation Initiation in Eukaryotes
- (2018) Thaddaeus Kwan et al. Cold Spring Harbor Perspectives in Biology
- Alteration of protein function by a silent polymorphism linked to tRNA abundance
- (2017) Sebastian Kirchner et al. PLOS BIOLOGY
- Differential bicodon usage in lowly and highly abundant proteins
- (2017) Luis A. Diambra PeerJ
- Fibronectin maintains the balance between hemostasis and thrombosis
- (2016) Yiming Wang et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- HSP90AB1: Helping the good and the bad
- (2016) Michael Haase et al. GENE
- Synonymous Codons Direct Cotranslational Folding toward Different Protein Conformations
- (2016) Florian Buhr et al. MOLECULAR CELL
- NOTCH1 regulates matrix gla protein and calcification gene networks in human valve endothelium
- (2015) Mark P. White et al. JOURNAL OF MOLECULAR AND CELLULAR CARDIOLOGY
- Hemagglutinin of Influenza A Virus Antagonizes Type I Interferon (IFN) Responses by Inducing Degradation of Type I IFN Receptor 1
- (2015) Chuan Xia et al. JOURNAL OF VIROLOGY
- Codon Bias as a Means to Fine-Tune Gene Expression
- (2015) Tessa E.F. Quax et al. MOLECULAR CELL
- An SH3 binding motif within the nucleocapsid protein of porcine reproductive and respiratory syndrome virus interacts with the host cellular signaling proteins STAMI, TXK, Fyn, Hck, and cortactin
- (2015) Scott P. Kenney et al. VIRUS RESEARCH
- Long term follow-up of four patients with Keutel syndrome
- (2014) H.E. Khosroshahi et al. AMERICAN JOURNAL OF MEDICAL GENETICS PART A
- The effect of tRNA levels on decoding times of mRNA codons
- (2014) Alexandra Dana et al. NUCLEIC ACIDS RESEARCH
- Attenuation of human respiratory syncytial virus by genome-scale codon-pair deoptimization
- (2014) C. Le Nouen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Exposing synonymous mutations
- (2014) Ryan C. Hunt et al. TRENDS IN GENETICS
- Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool
- (2013) Edward Y Chen et al. BMC BIOINFORMATICS
- Universal tight correlation of codon bias and pool of RNA codons (codonome): The genome is optimized to allow any distribution of gene expression values in the transcriptome from bacteria to humans
- (2013) Allison Piovesan et al. GENOMICS
- The MHC I loading complex: a multitasking machinery in adaptive immunity
- (2013) Sabine Hulpke et al. TRENDS IN BIOCHEMICAL SCIENCES
- Determinants of translation efficiency and accuracy
- (2011) H. Gingold et al. Molecular Systems Biology
- Explaining complex codon usage patterns with selection for translational efficiency, mutation bias, and genetic drift
- (2011) P. Shah et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- An Evolutionarily Conserved Mechanism for Controlling the Efficiency of Protein Translation
- (2010) Tamir Tuller et al. CELL
- Synonymous but not the same: the causes and consequences of codon bias
- (2010) Joshua B. Plotkin et al. NATURE REVIEWS GENETICS
- Translation efficiency is determined by both codon bias and folding energy
- (2010) Tamir Tuller et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Nonsense-mediated mRNA decay in human cells: mechanistic insights, functions beyond quality control and the double-life of NMD factors
- (2009) Pamela Nicholson et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- Translationally Optimal Codons Associate with Structurally Sensitive Sites in Proteins
- (2009) T. Zhou et al. MOLECULAR BIOLOGY AND EVOLUTION
- Synonymous Mutations and Ribosome Stalling Can Lead to Altered Folding Pathways and Distinct Minima
- (2008) Chung-Jung Tsai et al. JOURNAL OF MOLECULAR BIOLOGY
- Virus Attenuation by Genome-Scale Changes in Codon Pair Bias
- (2008) J. R. Coleman et al. SCIENCE
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started