Co-infection of Malassezia sympodialis With Bacterial Pathobionts Pseudomonas aeruginosa or Staphylococcus aureus Leads to Distinct Sinonasal Inflammatory Responses in a Murine Acute Sinusitis Model

Targeted Depletion of Bacteria from Mixed Populations by Programmable Adhesion with Antagonistic Competitor Cells

(2020) See-Yeun Ting et al.   Cell Host & Microbe

HGT in the human and skin commensalMalassezia: A bacterially derived flavohemoglobin is required for NO resistance and host interaction

(2020) Giuseppe Ianiri et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Malassezia Is Associated with Crohn’s Disease and Exacerbates Colitis in Mouse Models

(2019) Jose J. Limon et al.   Cell Host & Microbe

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

Twelve-year follow-up study after endoscopic sinus surgery in patients with chronic rhinosinusitis with nasal polyposis

(2019) Lien Calus et al.   Clinical and Translational Allergy

Longitudinal study of the bacterial and fungal microbiota in the human sinuses reveals seasonal and annual changes in diversity

(2019) Brett Wagner Mackenzie et al.   Scientific Reports

Predictors of efficacy for combination oral and topical corticosteroids to treat patients with chronic rhinosinusitis with nasal polyps

(2019) Madison V. Epperson et al.   International Forum of Allergy & Rhinology

The Influence of the Gut Microbiome on Cancer, Immunity, and Cancer Immunotherapy

(2018) Vancheswaran Gopalakrishnan et al.   CANCER CELL

Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin

(2018) Nicholas A. Bokulich et al.   Microbiome

The type VI secretion system deploys antifungal effectors against microbial competitors

(2018) Katharina Trunk et al.   Nature Microbiology

Inflammatory Endotypes and Microbial Associations in Chronic Rhinosinusitis

(2018) Michael Hoggard et al.   Frontiers in Immunology

Loss of Microbial Niche Specificity Between the Upper and Lower Airways in Patients With Cystic Fibrosis

(2018) Steven D. Pletcher et al.   LARYNGOSCOPE

The Type VI Secretion System: A Dynamic System for Bacterial Communication?

(2017) Mathias Gallique et al.   Frontiers in Microbiology

Chronic Rhinosinusitis with Polyps Is Characterized by Increased Mucosal and Blood Th17 Effector Cytokine Producing Cells

(2017) Dijana Miljkovic et al.   Frontiers in Physiology

Compositionally and functionally distinct sinus microbiota in chronic rhinosinusitis patients have immunological and clinically divergent consequences

(2017) Emily K. Cope et al.   Microbiome

Successful management of otitis externa

(2016) Tim Nuttall   IN PRACTICE

Inflammatory endotypes of chronic rhinosinusitis based on cluster analysis of biomarkers

(2016) Peter Tomassen et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

The microbiome and innate immunity

(2016) Christoph A. Thaiss et al.   NATURE

Neonatal gut microbiota associates with childhood multisensitized atopy and T cell differentiation

(2016) Kei E Fujimura et al.   NATURE MEDICINE

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

The Role of Staphylococcus aureus in Secondary Infections in Patients with Atopic Dermatitis (AD)

(2016) Jacek Międzobrodzki   Polish Journal of Microbiology

Biotic Interactions Shape the Ecological Distributions of Staphylococcus Species

(2016) Erik K. Kastman et al.   mBio

Evaluation ofMalasseziaand Common Fungal Pathogens in Subtypes of Chronic Rhinosinusitis

(2016) Jonathan T. Gelber et al.   International Forum of Allergy & Rhinology

A chronic rhinosinusitis-derived isolate ofPseudomonas aeruginosainduces acute and pervasive effects on the murine upper airway microbiome and host immune response

(2016) Emily K. Cope et al.   International Forum of Allergy & Rhinology

Measurements of Deposition, Lung Surface Area and Lung Fluid for Simulation of Inhaled Compounds

(2016) Eleonore Fröhlich et al.   Frontiers in Pharmacology

Immune Mechanisms of Chronic Rhinosinusitis

(2015) Kathryn E. Hulse   CURRENT ALLERGY AND ASTHMA REPORTS

Drivers of chronic rhinosinusitis: Inflammation versus infection

(2015) Daniel L. Hamilos   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Direct costs of adult chronic rhinosinusitis by using 4 methods of estimation: Results of the US Medical Expenditure Panel Survey

(2015) Lisa Caulley et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Systemic Staphylococcus aureus infection mediated by Candida albicans hyphal invasion of mucosal tissue

(2015) Lisa Marie Schlecht et al.   MICROBIOLOGY-SGM

Different clinical factors associated withStaphylococcus aureusandPseudomonas aeruginosain chronic rhinosinusitis

(2015) Zi Zhang et al.   International Forum of Allergy & Rhinology

Contrasting the microbiomes from healthy volunteers and patients with chronic rhinosinusitis.

(2014) Ronald G. Amedee   American Journal of Rhinology & Allergy

Conducting a Microbiome Study

(2014) Julia K. Goodrich et al.   CELL

Malasseziayeasts activate the NLRP3 inflammasome in antigen-presenting cells via Syk-kinase signalling

(2014) Magdalena Kistowska et al.   EXPERIMENTAL DERMATOLOGY

Dectin-1-mediated Signaling Leads to Characteristic Gene Expressions and Cytokine Secretion via Spleen Tyrosine Kinase (Syk) in Rat Mast Cells

(2014) Yukihiro Kimura et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Comparing samples—part II

(2014) Martin Krzywinski et al.   NATURE METHODS

Protective Effects of the Polyphenol Sesamin on Allergen-Induced TH2 Responses and Airway Inflammation in Mice

(2014) Ching-Huei Lin et al.   PLoS One

The fungal microbiome in chronic rhinosinusitis: richness, diversity, postoperative changes and patient outcomes

(2014) Edward John Cleland et al.   International Forum of Allergy & Rhinology

Increased expression of dectin-1 in nasal polyps

(2013) Jian Gong et al.   AMERICAN JOURNAL OF OTOLARYNGOLOGY

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Topographic diversity of fungal and bacterial communities in human skin

(2013) Keisha Findley et al.   NATURE

Intramucosal Bacterial Microcolonies Exist in Chronic Rhinosinusitis without Inducing a Local Immune Response

(2012) Andrew J. Wood et al.   American Journal of Rhinology & Allergy

Host Response Signature to Staphylococcus aureus Alpha-Hemolysin Implicates Pulmonary Th17 Response

(2012) Karen M. Frank et al.   INFECTION AND IMMUNITY

Molecular mechanisms that control the expression and activity of Bcl-6 in TH1 cells to regulate flexibility with a TFH-like gene profile

(2012) Kenneth J Oestreich et al.   NATURE IMMUNOLOGY

Sinus Microbiome Diversity Depletion and Corynebacterium tuberculostearicum Enrichment Mediates Rhinosinusitis

(2012) N. A. Abreu et al.   Science Translational Medicine

Assessment of the antifungal susceptibility of Malassezia pachydermatis in various media using a CLSI protocol

(2012) Claudia Cafarchia et al.   VETERINARY MICROBIOLOGY

The characteristics of intramucosal bacteria in chronic rhinosinusitis: a prospective cross-sectional analysis

(2012) Raymond Kim et al.   International Forum of Allergy & Rhinology

Treatment of Chronic Rhinosinusitis With Antibiotics

(2011) P. S. Mattila   CLINICAL INFECTIOUS DISEASES

Virally Expressed Interleukin-10 Ameliorates Acute Encephalomyelitis and Chronic Demyelination in Coronavirus-Infected Mice

(2011) K. Trandem et al.   JOURNAL OF VIROLOGY

Human nutrition, the gut microbiome and the immune system

(2011) Andrew L. Kau et al.   NATURE

Microtiter Dish Biofilm Formation Assay

(2011) George A. O'Toole   Jove-Journal of Visualized Experiments

Staphylococcus aureus invades the epithelium in nasal polyposis and induces IL-6 in nasal epithelial cells in vitro

(2010) F. Sachse et al.   ALLERGY

Mast cells generated from patients with atopic eczema have enhanced levels of granule mediators and an impaired Dectin-1 expression

(2010) C. Ribbing et al.   ALLERGY

Anti-inflammatory effects of the R2 peptide, an inhibitor of transglutaminase 2, in a mouse model of allergic asthma, induced by ovalbumin

(2010) Dae Yong Kim et al.   BRITISH JOURNAL OF PHARMACOLOGY

A Type VI Secretion System of Pseudomonas aeruginosa Targets a Toxin to Bacteria

(2010) Rachel D. Hood et al.   Cell Host & Microbe

Commensal microbiota induce LPS hyporesponsiveness in colonic macrophages via the production of IL-10

(2010) Yoshiyasu Ueda et al.   INTERNATIONAL IMMUNOLOGY

IL-17 is essential for host defense against cutaneous Staphylococcus aureus infection in mice

(2010) John S. Cho et al.   JOURNAL OF CLINICAL INVESTIGATION

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Migratory Response of Soil Bacteria to Lyophyllum sp. Strain Karsten in Soil Microcosms

(2009) J. A. Warmink et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Induction of Intestinal Th17 Cells by Segmented Filamentous Bacteria

(2009) Ivaylo I. Ivanov et al.   CELL

The Dectin-2 family of C-type lectins in immunity and homeostasis

(2009) Lisa M. Graham et al.   CYTOKINE

Cross-kingdom interactions:Candida albicansand bacteria

(2009) Mark E. Shirtliff et al.   FEMS MICROBIOLOGY LETTERS

ATP drives lamina propria TH17 cell differentiation

(2008) Koji Atarashi et al.   NATURE

Immune response to fungal infections

(2008) Jose L. Blanco et al.   VETERINARY IMMUNOLOGY AND IMMUNOPATHOLOGY