Global landscape of phenazine biosynthesis and biodegradation reveals species-specific colonization patterns in agricultural soils and crop microbiomes
出版年份 2020 全文链接
标题
Global landscape of phenazine biosynthesis and biodegradation reveals species-specific colonization patterns in agricultural soils and crop microbiomes
作者
关键词
-
出版物
eLife
Volume 9, Issue -, Pages -
出版商
eLife Sciences Publications, Ltd
发表日期
2020-09-15
DOI
10.7554/elife.59726
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Keystone metabolites of crop rhizosphere microbiomes
- (2020) Kurt M. Dahlstrom et al. CURRENT BIOLOGY
- Root Exudation of Primary Metabolites: Mechanisms and Their Roles in Plant Responses to Environmental Stimuli
- (2019) Alberto Canarini et al. Frontiers in Plant Science
- The transcription factors ActR and SoxR differentially affect the phenazine tolerance of Agrobacterium tumefaciens
- (2019) Elena K. Perry et al. MOLECULAR MICROBIOLOGY
- Interactive Tree Of Life (iTOL) v4: recent updates and new developments
- (2019) Ivica Letunic et al. NUCLEIC ACIDS RESEARCH
- The EMBL-EBI search and sequence analysis tools APIs in 2019
- (2019) Fábio Madeira et al. NUCLEIC ACIDS RESEARCH
- Functional and Structural Analysis of Phenazine O-Methyltransferase LaPhzM from Lysobacter antibioticus OH13 and One-Pot Enzymatic Synthesis of the Antibiotic Myxin
- (2018) Jiasong Jiang et al. ACS Chemical Biology
- Phenazine-1-carboxylic acid and soil moisture influence biofilm development and turnover of rhizobacterial biomass on wheat root surfaces
- (2018) Melissa K. LeTourneau et al. ENVIRONMENTAL MICROBIOLOGY
- PhdA Catalyzes the First Step of Phenazine-1-Carboxylic Acid Degradation in Mycobacterium fortuitum
- (2018) Kyle C. Costa et al. JOURNAL OF BACTERIOLOGY
- Long-Term Irrigation Affects the Dynamics and Activity of the Wheat Rhizosphere Microbiome
- (2018) Dmitri V. Mavrodi et al. Frontiers in Plant Science
- Phenazines in plant-beneficial Pseudomonas spp.: Biosynthesis, regulation, function and genomics
- (2018) Adrien Biessy et al. ENVIRONMENTAL MICROBIOLOGY
- Both toxic and beneficial effects of pyocyanin contribute to the lifecycle of Pseudomonas aeruginosa
- (2018) Lucas A. Meirelles et al. MOLECULAR MICROBIOLOGY
- A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life
- (2018) Donovan H Parks et al. NATURE BIOTECHNOLOGY
- Wheat microbiome bacteria can reduce virulence of a plant pathogenic fungus by altering histone acetylation
- (2018) Yun Chen et al. Nature Communications
- Diversity of phytobeneficial traits revealed by whole-genome analysis of worldwide-isolated phenazine-producing Pseudomonas spp.
- (2018) Adrien Biessy et al. ENVIRONMENTAL MICROBIOLOGY
- Genomic features of bacterial adaptation to plants
- (2017) Asaf Levy et al. NATURE GENETICS
- Simplified and representative bacterial community of maize roots
- (2017) Ben Niu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Plenty Is No Plague: Streptomyces Symbiosis with Crops
- (2017) Thomas Rey et al. TRENDS IN PLANT SCIENCE
- Heterocyclic Aromatic N-Oxidation in the Biosynthesis of Phenazine Antibiotics from Lysobacter antibioticus
- (2016) Yangyang Zhao et al. ORGANIC LETTERS
- Pyocyanin degradation by a tautomerizing demethylase inhibits Pseudomonas aeruginosa biofilms
- (2016) Kyle C. Costa et al. SCIENCE
- Electrochemical detection ofPseudomonasin wound exudate samples from patients with chronic wounds
- (2016) Hunter J. Sismaet et al. WOUND REPAIR AND REGENERATION
- Exposing the Three-Dimensional Biogeography and Metabolic States of Pathogens in Cystic Fibrosis Sputum via Hydrogel Embedding, Clearing, and rRNA Labeling
- (2016) William H. DePas et al. mBio
- Increasing aridity reduces soil microbial diversity and abundance in global drylands
- (2015) Fernando T. Maestre et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- IMG-ABC: A Knowledge Base To Fuel Discovery of Biosynthetic Gene Clusters and Novel Secondary Metabolites
- (2015) Michalis Hadjithomas et al. mBio
- Enzymatic Degradation of Phenazines Can Generate Energy and Protect Sensitive Organisms from Toxicity
- (2015) Kyle C. Costa et al. mBio
- High-Specificity Targeted Functional Profiling in Microbial Communities with ShortBRED
- (2015) James Kaminski et al. PLoS Computational Biology
- MUSiCC: a marker genes based framework for metagenomic normalization and accurate profiling of gene abundances in the microbiome
- (2015) Ohad Manor et al. GENOME BIOLOGY
- Next-Generation in Situ Hybridization Chain Reaction: Higher Gain, Lower Cost, Greater Durability
- (2014) Harry M. T. Choi et al. ACS Nano
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- Phenazine redox cycling enhances anaerobic survival inPseudomonas aeruginosaby facilitating generation of ATP and a proton-motive force
- (2014) Nathaniel R. Glasser et al. MOLECULAR MICROBIOLOGY
- Fast and sensitive protein alignment using DIAMOND
- (2014) Benjamin Buchfink et al. NATURE METHODS
- Bacterial Community Morphogenesis Is Intimately Linked to the Intracellular Redox State
- (2013) L. E. P. Dietrich et al. JOURNAL OF BACTERIOLOGY
- Iodinin (1,6-Dihydroxyphenazine 5,10-Dioxide) from Streptosporangium sp. Induces Apoptosis Selectively in Myeloid Leukemia Cell Lines and Patient Cells
- (2013) Lene Myhren et al. Marine Drugs
- The rhizosphere revisited: root microbiomics
- (2013) Peter A. H. M. Bakker et al. Frontiers in Plant Science
- Recent insights into the diversity, frequency and ecological roles of phenazines in fluorescentPseudomonasspp.
- (2012) Dmitri V. Mavrodi et al. ENVIRONMENTAL MICROBIOLOGY
- Population Structure and Diversity of Phenazine-1-Carboxylic Acid Producing Fluorescent Pseudomonas spp. from Dryland Cereal Fields of Central Washington State (USA)
- (2012) James A. Parejko et al. MICROBIAL ECOLOGY
- Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota
- (2012) Davide Bulgarelli et al. NATURE
- Accumulation of the Antibiotic Phenazine-1-Carboxylic Acid in the Rhizosphere of Dryland Cereals
- (2011) Dmitri V. Mavrodi et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- DNA Strand Cleavage by the Phenazine Di-N-oxide Natural Product Myxin under Both Aerobic and Anaerobic Conditions
- (2011) Goutam Chowdhury et al. CHEMICAL RESEARCH IN TOXICOLOGY
- Phenazine-1-Carboxylic Acid Promotes Bacterial Biofilm Development via Ferrous Iron Acquisition
- (2011) Y. Wang et al. JOURNAL OF BACTERIOLOGY
- FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
- (2010) Morgan N. Price et al. PLoS One
- Diversity and Evolution of the Phenazine Biosynthesis Pathway
- (2009) D. V. Mavrodi et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- The story of phosphorus: Global food security and food for thought
- (2009) Dana Cordell et al. GLOBAL ENVIRONMENTAL CHANGE-HUMAN AND POLICY DIMENSIONS
- Endogenous Phenazine Antibiotics Promote Anaerobic Survival of Pseudomonas aeruginosa via Extracellular Electron Transfer
- (2009) Y. Wang et al. JOURNAL OF BACTERIOLOGY
- Aromatic Prenylation in Phenazine Biosynthesis
- (2009) Orwah Saleh et al. JOURNAL OF BIOLOGICAL CHEMISTRY
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started