Small-scale population divergence is driven by local larval environment in a temperate amphibian

Occurrence of Batrachochytrium dendrobatidis in Sweden: higher infection prevalence in southern species

(2020) S Meurling et al.   DISEASES OF AQUATIC ORGANISMS

Riverscape genetic variation, migration patterns, and morphological variation of the threatened Round Rocksnail, Leptoxis ampla

(2019) Nathan V. Whelan et al.   MOLECULAR ECOLOGY

Post-glacial colonization routes coincide with a life-history breakpoint along a latitudinal gradient

(2019) Emilien Luquet et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Latitudinal divergence in a wide‐spread amphibian: contrasting patterns of neutral and adaptive genomic variation

(2019) Patrik Rödin‐Mörch et al.   MOLECULAR ECOLOGY

Gene flow limits adaptation along steep environmental gradients

(2019) Judith C. Bachmann et al.   AMERICAN NATURALIST

Landscape genetics reveals unique and shared effects of urbanization for two sympatric pool‐breeding amphibians

(2019) Jared J. Homola et al.   Ecology and Evolution

Fast inference of individual admixture coefficients using geographic data

(2018) Kevin Caye et al.   Annals of Applied Statistics

Comparing methods for detecting multilocus adaptation with multivariate genotype-environment associations

(2018) Brenna R. Forester et al.   MOLECULAR ECOLOGY

Evaluation of redundancy analysis to identify signatures of local adaptation

(2018) Thibaut Capblancq et al.   Molecular Ecology Resources

Microgeographic morphological variation across larval wood frog populations associated with environment despite gene flow

(2018) Amanda J. Zellmer   Ecology and Evolution

Frog breeding pond selection in response to predators and conspecific cues

(2017) Valerie L. Buxton et al.   ETHOLOGY

The Study of Local Adaptation: A Thriving Field of Research

(2017) Lynda F Delph   JOURNAL OF HEREDITY

Metapopulation modelling of long-term urban habitat-loss scenarios

(2017) Laura J. Graham et al.   LANDSCAPE ECOLOGY

Winter storms drive rapid phenotypic, regulatory, and genomic shifts in the green anole lizard

(2017) Shane C. Campbell-Staton et al.   SCIENCE

Developing approaches for linear mixed modeling in landscape genetics through landscape-directed dispersal simulations

(2017) Jeffrey R. Row et al.   Ecology and Evolution

Deconstructing isolation-by-distance: The genomic consequences of limited dispersal

(2017) Stepfanie M. Aguillon et al.   PLoS Genetics

Amphibian population genetics in agricultural landscapes: does viniculture drive the population structuring of the European common frog (Rana temporaria)?

(2017) Patrick P. Lenhardt et al.   PeerJ

Random forest missing data algorithms

(2017) Fei Tang et al.   Statistical Analysis and Data Mining

RAD sequencing resolves fine-scale population structure in a benthic invertebrate: implications for understanding phenotypic plasticity

(2017) David L. J. Vendrami et al.   Royal Society Open Science

Finding the Genomic Basis of Local Adaptation: Pitfalls, Practical Solutions, and Future Directions

(2016) Sean Hoban et al.   AMERICAN NATURALIST

Isolation-by-time population structure in potamodromous Dourado Salminus brasiliensis in southern Brazil

(2016) Josiane Ribolli et al.   CONSERVATION GENETICS

Effects of land use on population presence and genetic structure of an amphibian in an agricultural landscape

(2016) Melissa B. Youngquist et al.   LANDSCAPE ECOLOGY

Genomics of local adaptation with gene flow

(2016) Anna Tigano et al.   MOLECULAR ECOLOGY

pcadapt: anRpackage to perform genome scans for selection based on principal component analysis

(2016) Keurcien Luu et al.   Molecular Ecology Resources

Genome evolution in the allotetraploid frog Xenopus laevis

(2016) Adam M. Session et al.   NATURE

Genomic analysis of snub-nosed monkeys (Rhinopithecus) identifies genes and processes related to high-altitude adaptation

(2016) Li Yu et al.   NATURE GENETICS

Local divergence of thermal reaction norms among amphibian populations is affected by pond temperature variation

(2015) Alex Richter-Boix et al.   EVOLUTION

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Seven common mistakes in population genetics and how to avoid them

(2015) Patrick G. Meirmans   MOLECULAR ECOLOGY

Whole-genome sequence of the Tibetan frogNanorana parkeriand the comparative evolution of tetrapod genomes

(2015) Yan-Bo Sun et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

LEA: AnRpackage for landscape and ecological association studies

(2015) Eric Frichot et al.   Methods in Ecology and Evolution

Updated distribution and biogeography of amphibians and reptiles of Europe

(2014) Neftali Sillero et al.   AMPHIBIA-REPTILIA

Genome-wide SNPs lead to strong signals of geographic structure and relatedness patterns in the major arbovirus vector, Aedes aegypti

(2014) Gordana Rašić et al.   BMC GENOMICS

Isolation-by-distance in landscapes: considerations for landscape genetics

(2014) M J van Strien et al.   HEREDITY

Incipient habitat race formation in an amphibian

(2014) J. Van Buskirk   JOURNAL OF EVOLUTIONARY BIOLOGY

Isolation by environment

(2014) Ian J. Wang et al.   MOLECULAR ECOLOGY

Restriction site-associated DNA sequencing, genotyping error estimation andde novoassembly optimization for population genetic inference

(2014) A. Mastretta-Yanes et al.   Molecular Ecology Resources

Adaptive Genetic Divergence along Narrow Environmental Gradients in Four Stream Insects

(2014) Kozo Watanabe et al.   PLoS One

Microgeographic adaptation and the spatial scale of evolution

(2014) Jonathan L. Richardson et al.   TRENDS IN ECOLOGY & EVOLUTION

Rapid evolution of constitutive and inducible defenses against an invasive predator

(2013) Ana L. Nunes et al.   ECOLOGY

Widespread evidence for incipient ecological speciation: a meta-analysis of isolation-by-ecology

(2013) Aaron B. A. Shafer et al.   ECOLOGY LETTERS

LANDSCAPE GENOMICS IN ATLANTIC SALMON (SALMO SALAR): SEARCHING FOR GENE-ENVIRONMENT INTERACTIONS DRIVING LOCAL ADAPTATION

(2013) Bourret Vincent et al.   EVOLUTION

GENETIC ISOLATION BY ENVIRONMENT OR DISTANCE: WHICH PATTERN OF GENE FLOW IS MOST COMMON?

(2013) Jason P. Sexton et al.   EVOLUTION

Testing for Associations between Loci and Environmental Gradients Using Latent Factor Mixed Models

(2013) Eric Frichot et al.   MOLECULAR BIOLOGY AND EVOLUTION

Fine-grained adaptive divergence in an amphibian: genetic basis of phenotypic divergence and the role of nonrandom gene flow in restricting effective migration among wetlands

(2013) Alex Richter-Boix et al.   MOLECULAR ECOLOGY

A genomic island linked to ecotype divergence in Atlantic cod

(2013) Jakob Hemmer-Hansen et al.   MOLECULAR ECOLOGY

Stacks: an analysis tool set for population genomics

(2013) Julian Catchen et al.   MOLECULAR ECOLOGY

Adaptive introgression in animals: examples and comparison to new mutation and standing variation as sources of adaptive variation

(2013) Philip W. Hedrick   MOLECULAR ECOLOGY

QST–FST comparisons: evolutionary and ecological insights from genomic heterogeneity

(2013) Tuomas Leinonen et al.   NATURE REVIEWS GENETICS

Ecological genomics of local adaptation

(2013) Outi Savolainen et al.   NATURE REVIEWS GENETICS

Dynamics of Adaptation in Spatially Heterogeneous Metapopulations

(2013) Julien Papaïx et al.   PLoS One

The magnitude of local adaptation under genotype-dependent dispersal

(2013) Daniel I. Bolnick et al.   Ecology and Evolution

A beginner's guide to eukaryotic genome annotation

(2012) Mark Yandell et al.   NATURE REVIEWS GENETICS

Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species

(2012) Brant K. Peterson et al.   PLoS One

Disease Risk in Temperate Amphibian Populations Is Higher at Closed-Canopy Sites

(2012) C. Guilherme Becker et al.   PLoS One

adegenet 1.3-1: new tools for the analysis of genome-wide SNP data

(2011) Thibaut Jombart et al.   BIOINFORMATICS

ADAPTIVE DIVERGENCE IN MOOR FROG (RANA ARVALIS ) POPULATIONS ALONG AN ACIDIFICATION GRADIENT: INFERENCES FROM Q ST -F ST CORRELATIONS

(2011) Sandra Hangartner et al.   EVOLUTION

ESTABLISHMENT AND MAINTENANCE OF ADAPTIVE GENETIC DIVERGENCE UNDER MIGRATION, SELECTION, AND DRIFT

(2011) Sam Yeaman et al.   EVOLUTION

Extent and scale of local adaptation in salmonid fishes: review and meta-analysis

(2011) D J Fraser et al.   HEREDITY

Pollination graphs: quantifying pollen pool covariance networks and the influence of intervening landscape on genetic connectivity in the North American understory tree, Cornus florida L.

(2011) Rodney J. Dyer et al.   LANDSCAPE ECOLOGY

Eco‐Evolutionary Metapopulation Dynamics and the Spatial Scale of Adaptation

(2010) Ilkka Hanski et al.   AMERICAN NATURALIST

Combining demography and genetic analysis to assess the population structure of an amphibian in a human-dominated landscape

(2010) Toni Safner et al.   CONSERVATION GENETICS

Spatial dependence of phenotype-environment associations for tadpoles in natural ponds

(2010) Matt J. Michel   EVOLUTIONARY ECOLOGY

The Genome of the Western Clawed Frog Xenopus tropicalis

(2010) U. Hellsten et al.   SCIENCE

Testing the significance of canonical axes in redundancy analysis

(2010) Pierre Legendre et al.   Methods in Ecology and Evolution

The role of amphibian antimicrobial peptides in protection of amphibians from pathogens linked to global amphibian declines

(2009) Louise A. Rollins-Smith   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

PHENOTYPE-DEPENDENT NATIVE HABITAT PREFERENCE FACILITATES DIVERGENCE BETWEEN PARAPATRIC LAKE AND STREAM STICKLEBACK

(2009) Daniel I. Bolnick et al.   EVOLUTION

TRH acts as a multifunctional hypophysiotropic factor in vertebrates

(2009) Ludovic Galas et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

adegenet: a R package for the multivariate analysis of genetic markers

(2008) Thibaut Jombart   BIOINFORMATICS

Differentiating Migration and Dispersal Processes for Pond-Breeding Amphibians

(2008) Raymond D. Semlitsch   JOURNAL OF WILDLIFE MANAGEMENT

A Meta-Analysis of Local Adaptation in Plants

(2008) Roosa Leimu et al.   PLoS One

Adaptation from standing genetic variation

(2007) R BARRETT et al.   TRENDS IN ECOLOGY & EVOLUTION