Seven common mistakes in population genetics and how to avoid them

The relative power of genome scans to detect local adaptation depends on sampling design and statistical method

(2015) Katie E. Lotterhos et al.   MOLECULAR ECOLOGY

Origin and genome evolution of polyploid green toads in Central Asia: evidence from microsatellite markers

(2014) C Betto-Colliard et al.   HEREDITY

Testing for Hardy–Weinberg Proportions: Have We Lost the Plot?

(2014) Robin S. Waples   JOURNAL OF HEREDITY

Evaluation of demographic history and neutral parameterization on the performance ofFSToutlier tests

(2014) Katie E. Lotterhos et al.   MOLECULAR ECOLOGY

Advances and limits of using population genetics to understand local adaptation

(2014) Peter Tiffin et al.   TRENDS IN ECOLOGY & EVOLUTION

Widespread evidence for incipient ecological speciation: a meta-analysis of isolation-by-ecology

(2013) Aaron B. A. Shafer et al.   ECOLOGY LETTERS

Robust Identification of Local Adaptation from Allele Frequencies

(2013) T. Gunther et al.   GENETICS

Testing for Associations between Loci and Environmental Gradients Using Latent Factor Mixed Models

(2013) Eric Frichot et al.   MOLECULAR BIOLOGY AND EVOLUTION

Quantifying the roles of ecology and geography in spatial genetic divergence

(2012) Ian J. Wang et al.   ECOLOGY LETTERS

AMOVA-Based Clustering of Population Genetic Data

(2012) Patrick G. Meirmans   JOURNAL OF HEREDITY

The trouble with isolation by distance

(2012) PATRICK G. MEIRMANS   MOLECULAR ECOLOGY

Popular misconceptions

(2012) ROBERT C. VRIJENHOEK et al.   MOLECULAR ECOLOGY

On the spatial scale of dispersal in coral reef fishes

(2012) O. Puebla et al.   MOLECULAR ECOLOGY

Nonsignificant isolation by distance implies limited dispersal

(2012) Katie E. Lotterhos   MOLECULAR ECOLOGY

The role of selection in driving landscape genomic structure of the waterfleaDaphnia magna

(2012) Luisa Orsini et al.   MOLECULAR ECOLOGY

Common misconceptions in molecular ecology: echoes of the modern synthesis

(2012) STEPHEN A. KARL et al.   MOLECULAR ECOLOGY

Human-induced hybridization among congeneric endemic plants on Tenerife, Canary Islands

(2012) Thomas van Hengstum et al.   PLANT SYSTEMATICS AND EVOLUTION

Inference of Population Structure using Dense Haplotype Data

(2012) Daniel John Lawson et al.   PLoS Genetics

The coupling hypothesis: why genome scans may fail to map local adaptation genes

(2011) NICOLAS BIERNE et al.   MOLECULAR ECOLOGY

A Map of Local Adaptation in Arabidopsis thaliana

(2011) A. Fournier-Level et al.   SCIENCE

Discriminant analysis of principal components: a new method for the analysis of genetically structured populations

(2010) Thibaut Jombart et al.   BMC GENETICS

Marlin, software to create, run, and analyse spatially realistic simulations

(2010) PATRICK G. MEIRMANS   Molecular Ecology Resources

Comparison of the Mantel test and alternative approaches for detecting complex multivariate relationships in the spatial analysis of genetic data

(2010) PIERRE LEGENDRE et al.   Molecular Ecology Resources

Common SNPs explain a large proportion of the heritability for human height

(2010) Jian Yang et al.   NATURE GENETICS

Detecting loci under selection in a hierarchically structured population

(2009) L Excoffier et al.   HEREDITY

The Genetic Structure and History of Africans and African Americans

(2009) S. A. Tishkoff et al.   SCIENCE

A Genealogical Interpretation of Principal Components Analysis

(2009) Gil McVean   PLoS Genetics

quantiNemo: an individual-based program to simulate quantitative traits with explicit genetic architecture in a dynamic metapopulation

(2008) S. Neuenschwander et al.   BIOINFORMATICS