A Bayesian model for detection of high-order interactions among genetic variants in genome-wide association studies

Improved production of fatty acid ethyl esters in Saccharomyces cerevisiae through up-regulation of the ethanol degradation pathway and expression of the heterologous phosphoketolase pathway

(2014) Bouke Wim de Jong et al.   Microbial Cell Factories

Detecting epistasis in human complex traits

(2014) Wen-Hua Wei et al.   NATURE REVIEWS GENETICS

Identification of quantitative trait loci (QTLs) for seed protein concentration in soybean and analysis for additive effects and epistatic effects of QTLs under multiple environments

(2014) Zhaoming Qi et al.   PLANT BREEDING

Strong evidence for protein epistasis, weak evidence against it

(2014) D. D. Pollock et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Network-guided sparse regression modeling for detection of gene-by-gene interactions

(2013) Chen Lu et al.   BIOINFORMATICS

Should evolutionary geneticists worry about higher-order epistasis?

(2013) Daniel M Weinreich et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

WHY EPISTASIS IS IMPORTANT FOR SELECTION AND ADAPTATION

(2013) Thomas F. Hansen   EVOLUTION

Epistatic models and pre-selection of markers improve prediction of performance in corn

(2013) John W. Dudley et al.   MOLECULAR BREEDING

Epistasis and quantitative traits: using model organisms to study gene–gene interactions

(2013) Trudy F. C. Mackay   NATURE REVIEWS GENETICS

Multiple loci and genetic interactions involving flowering time genes regulate stem branching among natural variants of Arabidopsis

(2013) Xueqing Huang et al.   NEW PHYTOLOGIST

Soybean knowledge base (SoyKB): a web resource for integration of soybean translational genomics and molecular breeding

(2013) Trupti Joshi et al.   NUCLEIC ACIDS RESEARCH

Identification and biochemical characterization of five long-chain acyl-coenzyme A synthetases from the diatom Phaeodactylum tricornutum

(2013) Xiaojing Guo et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Development and Evaluation of SoySNP50K, a High-Density Genotyping Array for Soybean

(2013) Qijian Song et al.   PLoS One

An Evolutionary Perspective on Epistasis and the Missing Heritability

(2013) Gibran Hemani et al.   PLoS Genetics

Ultrafast genome-wide scan for SNP-SNP interactions in common complex disease

(2012) S. Prabhu et al.   GENOME RESEARCH

Optimization of fatty alcohol biosynthesis pathway for selectively enhanced production of C12/14 and C16/18 fatty alcohols in engineered Escherichia coli

(2012) Yan-Ning Zheng et al.   Microbial Cell Factories

Epistasis as the primary factor in molecular evolution

(2012) Michael S. Breen et al.   NATURE

Block-based Bayesian epistasis association mapping with application to WTCCC type 1 diabetes data

(2011) Yu Zhang et al.   Annals of Applied Statistics

TRM: A Powerful Two-Stage Machine Learning Approach for Identifying SNP-SNP Interactions

(2011) Hui-Yi Lin et al.   ANNALS OF HUMAN GENETICS

Detecting genome-wide epistases based on the clustering of relatively frequent items

(2011) Minzhu Xie et al.   BIOINFORMATICS

An empirical comparison of several recent epistatic interaction detection methods

(2011) Y. Wang et al.   BIOINFORMATICS

Travelling the world of gene-gene interactions

(2011) K. Van Steen   BRIEFINGS IN BIOINFORMATICS

A Simple Approach for Predicting Protein-Protein Interactions

(2011) Mamoon Rashid et al.   CURRENT PROTEIN & PEPTIDE SCIENCE

Integrating pathway analysis and genetics of gene expression for genome-wide association study of basal cell carcinoma

(2011) Mingfeng Zhang et al.   HUMAN GENETICS

BOOST: A Fast Approach to Detecting Gene-Gene Interactions in Genome-wide Case-Control Studies

(2010) Xiang Wan et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Conditions Under Which Genome-Wide Association Studies Will be Positively Misleading

(2010) A. Platt et al.   GENETICS

Prevalent positive epistasis in Escherichia coli and Saccharomyces cerevisiae metabolic networks

(2010) Xionglei He et al.   NATURE GENETICS

The ectopic expression of the wheat Puroindoline genes increase germ size and seed oil content in transgenic corn

(2010) Jinrui Zhang et al.   PLANT MOLECULAR BIOLOGY

Detecting and understanding combinatorial mutation patterns responsible for HIV drug resistance

(2010) J. Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Bayesian Partition Method for Detecting Pleiotropic and Epistatic eQTL Modules

(2010) Wei Zhang et al.   PLoS Computational Biology

Increasing the flow of carbon into seed oil

(2009) Randall J. Weselake et al.   BIOTECHNOLOGY ADVANCES

Finding the missing heritability of complex diseases

(2009) Teri A. Manolio et al.   NATURE

Acyltransferase action in the modification of seed oil biosynthesis

(2009) Crystal L. Snyder et al.   New Biotechnology

MUFOLD: A new solution for protein 3D structure prediction

(2009) Jingfen Zhang et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Assessing the Impact of Transgenerational Epigenetic Variation on Complex Traits

(2009) Frank Johannes et al.   PLoS Genetics

SNPHarvester: a filtering-based approach for detecting epistatic interactions in genome-wide association studies

(2008) Can Yang et al.   BIOINFORMATICS

Natural history of the E1-like superfamily: Implication for adenylation, sulfur transfer, and ubiquitin conjugation

(2008) A. Maxwell Burroughs et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS