DectICO: an alignment-free supervised metagenomic classification method based on feature extraction and dynamic selection
出版年份 2015 全文链接
标题
DectICO: an alignment-free supervised metagenomic classification method based on feature extraction and dynamic selection
作者
关键词
Alignment-free, Metagenome, Classification, Sequence feature, Feature selection
出版物
BMC BIOINFORMATICS
Volume 16, Issue 1, Pages -
出版商
Springer Nature
发表日期
2015-10-07
DOI
10.1186/s12859-015-0753-3
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Intrinsic correlation of oligonucleotides: A novel genomic signature for metagenome analysis
- (2014) Xiao Ding et al. JOURNAL OF THEORETICAL BIOLOGY
- Comparison of Metatranscriptomic Samples Based on k-Tuple Frequencies
- (2014) Ying Wang et al. PLoS One
- A Kernel-Based Multivariate Feature Selection Method for Microarray Data Classification
- (2014) Shiquan Sun et al. PLoS One
- Alignment-free supervised classification of metagenomes by recursive SVM
- (2013) Hongfei Cui et al. BMC GENOMICS
- Role of the gut microbiota in human nutrition and metabolism
- (2013) Balakrishnan S Ramakrishna JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY
- MetaCluster 5.0: a two-round binning approach for metagenomic data for low-abundance species in a noisy sample
- (2012) Y. Wang et al. BIOINFORMATICS
- Comparison of metagenomic samples using sequence signatures
- (2012) Bai Jiang et al. BMC GENOMICS
- Current opportunities and challenges in microbial metagenome analysis--a bioinformatic perspective
- (2012) H. Teeling et al. BRIEFINGS IN BIOINFORMATICS
- A metagenome-wide association study of gut microbiota in type 2 diabetes
- (2012) Junjie Qin et al. NATURE
- The role of the gut microbiota in nutrition and health
- (2012) Harry J. Flint et al. Nature Reviews Gastroenterology & Hepatology
- The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
- (2012) Christian Quast et al. NUCLEIC ACIDS RESEARCH
- HabiSign: a novel approach for comparison of metagenomes and rapid identification of habitat-specific sequences
- (2011) Tarini Ghosh et al. BMC BIOINFORMATICS
- A Novel Abundance-Based Algorithm for Binning Metagenomic Sequences Using l-tuples
- (2011) Yu-Wei Wu et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Metagenomic Analyses: Past and Future Trends
- (2010) Carola Simon et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Comparison of multiple metagenomes using phylogenetic networks based on ecological indices
- (2010) Suparna Mitra et al. ISME Journal
- A human gut microbial gene catalogue established by metagenomic sequencing
- (2010) Junjie Qin et al. NATURE
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- A Primer on Metagenomics
- (2010) John C. Wooley et al. PLoS Computational Biology
- Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
- (2009) P. D. Schloss et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Methods for comparative metagenomics
- (2009) Daniel H Huson et al. BMC BIOINFORMATICS
- Analysis and comparison of very large metagenomes with fast clustering and functional annotation
- (2009) Weizhong Li BMC BIOINFORMATICS
- Unsupervised statistical clustering of environmental shotgun sequences
- (2009) Andrey Kislyuk et al. BMC BIOINFORMATICS
- The NIH Human Microbiome Project
- (2009) et al. GENOME RESEARCH
- SlimPLS: A Method for Feature Selection in Gene Expression-Based Disease Classification
- (2009) Michael Gutkin et al. PLoS One
- Functional metagenomic profiling of nine biomes
- (2008) Elizabeth A. Dinsdale et al. NATURE
- The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
- (2008) J. R. Cole et al. NUCLEIC ACIDS RESEARCH
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started