标题
Understanding the evolution of interspecies interactions in microbial communities
作者
关键词
-
出版物
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
Volume 375, Issue 1798, Pages 20190256
出版商
The Royal Society
发表日期
2020-03-23
DOI
10.1098/rstb.2019.0256
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Evolutionary dynamics of bacteria in the gut microbiome within and across hosts
- (2019) Nandita R. Garud et al. PLOS BIOLOGY
- Towards a quantitative view of the global ubiquity of biofilms
- (2019) Yinon M. Bar-On et al. NATURE REVIEWS MICROBIOLOGY
- The rate of environmental fluctuations shapes ecological dynamics in a two-species microbial system
- (2019) Alejandra Rodríguez-Verdugo et al. ECOLOGY LETTERS
- Adaptive Evolution within Gut Microbiomes of Healthy People
- (2019) Shijie Zhao et al. Cell Host & Microbe
- Modular Assembly of Polysaccharide-Degrading Marine Microbial Communities
- (2019) Tim N. Enke et al. CURRENT BIOLOGY
- A multiphase theory for spreading microbial swarms and films
- (2019) Siddarth Srinivasan et al. eLife
- Coping with multiple enemies: pairwise interactions do not predict evolutionary change in complex multitrophic communities
- (2019) Deirdre McClean et al. OIKOS
- Metabolic basis of brain-like electrical signalling in bacterial communities
- (2019) Rosa Martinez-Corral et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Simulations reveal challenges to artificial community selection and possible strategies for success
- (2019) Li Xie et al. PLOS BIOLOGY
- Understanding microbial community dynamics to improve optimal microbiome selection
- (2019) Robyn J. Wright et al. Microbiome
- Evolution of mutualism from parasitism in experimental virus populations
- (2018) Jason W. Shapiro et al. EVOLUTION
- How spatial structure and neighbor uncertainty promote mutualists and weaken black queen effects
- (2018) Simon Maccracken Stump et al. JOURNAL OF THEORETICAL BIOLOGY
- Current understanding of the human microbiome
- (2018) Jack A Gilbert et al. NATURE MEDICINE
- Modifying and reacting to the environmental pH can drive bacterial interactions
- (2018) Christoph Ratzke et al. PLOS BIOLOGY
- Emergent simplicity in microbial community assembly
- (2018) Joshua E. Goldford et al. SCIENCE
- A critique for eco-evolutionary dynamics
- (2018) Andrew P. Hendry FUNCTIONAL ECOLOGY
- Analyzing eco‐evolutionary dynamics ‐ the challenging complexity of the real world
- (2018) Luc De Meester et al. FUNCTIONAL ECOLOGY
- Evolution of bidirectional costly mutualism from byproduct consumption
- (2018) William R. Harcombe et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Environmentally Mediated Social Dilemmas
- (2018) Sylvie Estrela et al. TRENDS IN ECOLOGY & EVOLUTION
- Embracing the unknown: disentangling the complexities of the soil microbiome
- (2017) Noah Fierer NATURE REVIEWS MICROBIOLOGY
- Microbial community assembly and evolution in subseafloor sediment
- (2017) Piotr Starnawski et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Lotka-Volterra pairwise modeling fails to capture diverse pairwise microbial interactions
- (2017) Babak Momeni et al. eLife
- Metagenomics of urban sewage identifies an extensively shared antibiotic resistome in China
- (2017) Jian-Qiang Su et al. Microbiome
- Modeling Microbial Communities: A Call for Collaboration between Experimentalists and Theorists
- (2017) et al. Processes
- Community structure follows simple assembly rules in microbial microcosms
- (2017) Jonathan Friedman et al. Nature Ecology & Evolution
- Levels of selection in biofilms: multispecies biofilms are not evolutionary individuals
- (2016) Ellen Clarke BIOLOGY & PHILOSOPHY
- Eco-evolutionary dynamics in a coevolving host-virus system
- (2016) Jens Frickel et al. ECOLOGY LETTERS
- When can positive interactions cause alternative stable states in ecosystems?
- (2016) Sonia Kéfi et al. FUNCTIONAL ECOLOGY
- Engineering microbial consortia for controllable outputs
- (2016) Stephen R Lindemann et al. ISME Journal
- Challenges in microbial ecology: building predictive understanding of community function and dynamics
- (2016) Stefanie Widder et al. ISME Journal
- Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations
- (2016) Matthew L Bendall et al. ISME Journal
- Resource-dependent attenuation of species interactions during bacterial succession
- (2016) Damian W Rivett et al. ISME Journal
- Segregating metabolic processes into different microbial cells accelerates the consumption of inhibitory substrates
- (2016) Elin E Lilja et al. ISME Journal
- Synthetic Ecology of Microbes: Mathematical Models and Applications
- (2016) Ali R. Zomorrodi et al. JOURNAL OF MOLECULAR BIOLOGY
- The evolution of cooperation within the gut microbiota
- (2016) Seth Rakoff-Nahoum et al. NATURE
- Spatial structure, cooperation and competition in biofilms
- (2016) Carey D. Nadell et al. NATURE REVIEWS MICROBIOLOGY
- Within-host evolution of bacterial pathogens
- (2016) Xavier Didelot et al. NATURE REVIEWS MICROBIOLOGY
- Lateral Gene Transfer in a Heavy Metal-Contaminated-Groundwater Microbial Community
- (2016) Christopher L. Hemme et al. mBio
- Inhibitory interactions promote frequent bistability among competing bacteria
- (2016) Erik S. Wright et al. Nature Communications
- Local adaptation of a bacterium is as important as its presence in structuring a natural microbial community
- (2016) Pedro Gómez et al. Nature Communications
- Community-level cohesion without cooperation
- (2016) Mikhail Tikhonov eLife
- High functional diversity stimulates diversification in experimental microbial communities
- (2016) A. Jousset et al. Science Advances
- How Do Species Interactions Affect Evolutionary Dynamics Across Whole Communities?
- (2015) Timothy G. Barraclough Annual Review of Ecology Evolution and Systematics
- Parallel Compensatory Evolution Stabilizes Plasmids across the Parasitism-Mutualism Continuum
- (2015) Ellie Harrison et al. CURRENT BIOLOGY
- Levels and limits in artificial selection of communities
- (2015) Manuel Blouin et al. ECOLOGY LETTERS
- Privatization of cooperative benefits stabilizes mutualistic cross-feeding interactions in spatially structured environments
- (2015) Samay Pande et al. ISME Journal
- Rethinking evolutionary individuality
- (2015) Marc Ereshefsky et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Community rescue in experimental metacommunities
- (2015) Etienne Low-Décarie et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The ecology of the microbiome: Networks, competition, and stability
- (2015) K. Z. Coyte et al. SCIENCE
- Theory in Biology: Figure 1 or Figure 7?
- (2015) Rob Phillips TRENDS IN CELL BIOLOGY
- Ecological perspectives on synthetic biology: insights from microbial population biology
- (2015) Ana E. Escalante et al. Frontiers in Microbiology
- Games of life and death: antibiotic resistance and production through the lens of evolutionary game theory
- (2014) Peter L Conlin et al. CURRENT OPINION IN MICROBIOLOGY
- Microbes are not bound by sociobiology: Response to Kümmerli and Ross-Gillespie (2013)
- (2014) Paul B. Rainey et al. EVOLUTION
- Evolution of species interactions determines microbial community productivity in new environments
- (2014) Francesca Fiegna et al. ISME Journal
- Evolution of microbial markets
- (2014) G. D. A. Werner et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Clustering in community structure across replicate ecosystems following a long-term bacterial evolution experiment
- (2014) Hasan Celiker et al. Nature Communications
- Social evolution in structured populations
- (2014) F. Débarre et al. Nature Communications
- Microbial communities evolve faster in extreme environments
- (2014) Sheng-Jin Li et al. Scientific Reports
- Metabolic Resource Allocation in Individual Microbes Determines Ecosystem Interactions and Spatial Dynamics
- (2014) William R. Harcombe et al. Cell Reports
- The First Steps of Adaptation of Escherichia coli to the Gut Are Dominated by Soft Sweeps
- (2014) João Barroso-Batista et al. PLoS Genetics
- The Genotypic View of Social Interactions in Microbial Communities
- (2013) Sara Mitri et al. Annual Review of Genetics
- Tit-for-Tat: Type VI Secretion System Counterattack during Bacterial Cell-Cell Interactions
- (2013) Marek Basler et al. CELL
- Eco-evolutionary feedbacks drive species interactions
- (2013) Andrés Andrade-Domínguez et al. ISME Journal
- Genetic variation of a bacterial pathogen within individuals with cystic fibrosis provides a record of selective pressures
- (2013) Tami D Lieberman et al. NATURE GENETICS
- Genome dynamics during experimental evolution
- (2013) Jeffrey E. Barrick et al. NATURE REVIEWS GENETICS
- Experimental coevolution of species interactions
- (2013) Michael A. Brockhurst et al. TRENDS IN ECOLOGY & EVOLUTION
- Strong inter-population cooperation leads to partner intermixing in microbial communities
- (2013) Babak Momeni et al. eLife
- From Metabolism to Ecology: Cross-Feeding Interactions Shape the Balance between Polymicrobial Conflict and Mutualism
- (2012) Sylvie Estrela et al. AMERICAN NATURALIST
- Competition, Not Cooperation, Dominates Interactions among Culturable Microbial Species
- (2012) Kevin R. Foster et al. CURRENT BIOLOGY
- Predation on infected host promotes evolutionary branching of virulence and pathogens' biodiversity
- (2012) Andrew Morozov et al. JOURNAL OF THEORETICAL BIOLOGY
- Stability criteria for complex ecosystems
- (2012) Stefano Allesina et al. NATURE
- Evolutionary rescue and the limits of adaptation
- (2012) G. Bell PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Selective sweeps in growing microbial colonies
- (2012) Kirill S Korolev et al. PHYSICAL BIOLOGY
- In Situ Evolutionary Rate Measurements Show Ecological Success of Recently Emerged Bacterial Hybrids
- (2012) V. J. Denef et al. SCIENCE
- Anticipating Critical Transitions
- (2012) M. Scheffer et al. SCIENCE
- The rhizosphere microbiome and plant health
- (2012) Roeland L. Berendsen et al. TRENDS IN PLANT SCIENCE
- The Black Queen Hypothesis: Evolution of Dependencies through Adaptive Gene Loss
- (2012) J. J. Morris et al. mBio
- Species Interactions Alter Evolutionary Responses to a Novel Environment
- (2012) Diane Lawrence et al. PLOS BIOLOGY
- Microbial Communities as Experimental Units
- (2011) Mitch D. Day et al. BIOSCIENCE
- Host-parasite coevolutionary arms races give way to fluctuating selection
- (2011) Alex R. Hall et al. ECOLOGY LETTERS
- Understanding microbial cooperation
- (2011) James A. Damore et al. JOURNAL OF THEORETICAL BIOLOGY
- Social evolution in multispecies biofilms
- (2011) S. Mitri et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Newest Synthesis: Understanding the Interplay of Evolutionary and Ecological Dynamics
- (2011) T. W. Schoener SCIENCE
- Bacteria-Phage Antagonistic Coevolution in Soil
- (2011) P. Gomez et al. SCIENCE
- Some Consequences of Demographic Stochasticity in Population Genetics
- (2010) T. L. Parsons et al. GENETICS
- What is flux balance analysis?
- (2010) Jeffrey D Orth et al. NATURE BIOTECHNOLOGY
- Microbial secretor-cheater dynamics
- (2010) S. A. Frank PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Evolutionary game theory: Theoretical concepts and applications to microbial communities
- (2010) Erwin Frey PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS
- Rapid evolution of stability and productivity at the origin of a microbial mutualism
- (2010) K. L. Hillesland et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Evolution in predator–prey systems
- (2010) Rick Durrett et al. STOCHASTIC PROCESSES AND THEIR APPLICATIONS
- Inverse‐Gene‐for‐Gene Infection Genetics and Coevolutionary Dynamics
- (2009) Andrew Fenton et al. AMERICAN NATURALIST
- Microbial communities in industrial environment
- (2009) Johanna Maukonen et al. CURRENT OPINION IN MICROBIOLOGY
- Rate of Adaptation in Large Sexual Populations
- (2009) R. A. Neher et al. GENETICS
- Snowdrift game dynamics and facultative cheating in yeast
- (2009) Jeff Gore et al. NATURE
- Fitness and its role in evolutionary genetics
- (2009) H. Allen Orr NATURE REVIEWS GENETICS
- Bacterial competition: surviving and thriving in the microbial jungle
- (2009) Michael E. Hibbing et al. NATURE REVIEWS MICROBIOLOGY
- Evolutionary dynamics in structured populations
- (2009) M. A. Nowak et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Unraveling Microbial Interactions in Food Fermentations: from Classical to Genomics Approaches
- (2008) S. Sieuwerts et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- The Price equation
- (2008) Andy Gardner CURRENT BIOLOGY
- Preferential allocation to beneficial symbiont with spatial structure maintains mycorrhizal mutualism
- (2008) James D. Bever et al. ECOLOGY LETTERS
- Individual-based Modelling: An Essential Tool for Microbiology
- (2008) Jordi Ferrer et al. JOURNAL OF BIOLOGICAL PHYSICS
- Availability of prey resources drives evolution of predator-prey interaction
- (2008) V.-P. Friman et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- A simple and general explanation for the evolution of altruism
- (2008) J. A Fletcher et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Microbial Ecology of Ocean Biogeochemistry: A Community Perspective
- (2008) S. L. Strom SCIENCE
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now