Gene Transmission in the One Health Microbiosphere and the Channels of Antimicrobial Resistance
出版年份 2019 全文链接
标题
Gene Transmission in the One Health Microbiosphere and the Channels of Antimicrobial Resistance
作者
关键词
-
出版物
Frontiers in Microbiology
Volume 10, Issue -, Pages -
出版商
Frontiers Media SA
发表日期
2019-12-17
DOI
10.3389/fmicb.2019.02892
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- The Microbiome Stress Project: Toward a Global Meta-Analysis of Environmental Stressors and Their Effects on Microbial Communities
- (2019) Jennifer D. Rocca et al. Frontiers in Microbiology
- Antibiotic resistance in European wastewater treatment plants mirrors the pattern of clinical antibiotic resistance prevalence
- (2019) Katariina M. M. Pärnänen et al. Science Advances
- Evolutionary dynamics of bacteria in the gut microbiome within and across hosts
- (2019) Nandita R. Garud et al. PLOS BIOLOGY
- Evolutionary change in the human gut microbiome: From a static to a dynamic view
- (2019) Isabel Gordo PLOS BIOLOGY
- Man-made microbial resistances in built environments
- (2019) Alexander Mahnert et al. Nature Communications
- Simulating Multilevel Dynamics of Antimicrobial Resistance in a Membrane Computing Model
- (2019) Marcelino Campos et al. mBio
- Globe to gut: inside Big Food
- (2019) Felicity Lawrence NATURE
- Microbial residence time is a controlling parameter of the taxonomic composition and functional profile of microbial communities
- (2019) Cresten Mansfeldt et al. ISME Journal
- Antimicrobial resistance in a One Health context: exploring complexities, seeking solutions, and communicating risks
- (2019) H. Morgan Scott et al. Annals of the New York Academy of Sciences
- Soil aggregate microbial communities: Towards understanding microbiome interactions at biologically relevant scales
- (2019) Regina L. Wilpiszeski et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- One Health - Cycling of diverse microbial communities as a connecting force for soil, plant, animal, human and ecosystem health
- (2019) Ariena H.C. van Bruggen et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Global trends in antimicrobial resistance in animals in low- and middle-income countries
- (2019) Thomas P. Van Boeckel et al. SCIENCE
- Understanding the Epidemiology of Multi-Drug Resistant Gram-Negative Bacilli in the Middle East Using a One Health Approach
- (2019) Iman Dandachi et al. Frontiers in Microbiology
- Defining and combating antibiotic resistance from One Health and Global Health perspectives
- (2019) Sara Hernando-Amado et al. Nature Microbiology
- Microcins in Enterobacteriaceae: Peptide Antimicrobials in the Eco-Active Intestinal Chemosphere
- (2019) Fernando Baquero et al. Frontiers in Microbiology
- Description of Klebsiella spallanzanii sp. nov. and of Klebsiella pasteurii sp. nov.
- (2019) Cristina Merla et al. Frontiers in Microbiology
- A pan-genome-based machine learning approach for predicting antimicrobial resistance activities of the Escherichia coli strains
- (2018) Hsuan-Lin Her et al. BIOINFORMATICS
- Strain Tracking Reveals the Determinants of Bacterial Engraftment in the Human Gut Following Fecal Microbiota Transplantation
- (2018) Christopher S. Smillie et al. Cell Host & Microbe
- Horizontal Gene Transfer Building Prokaryote Genomes: Genes Related to Exchange Between Cell and Environment are Frequently Transferred
- (2018) Apuã C. M. Paquola et al. JOURNAL OF MOLECULAR EVOLUTION
- Population genomics of bacterial host adaptation
- (2018) Samuel K. Sheppard et al. NATURE REVIEWS GENETICS
- The new Green Revolution: Sustainable intensification of agriculture by intercropping
- (2018) Marc-Olivier Martin-Guay et al. SCIENCE OF THE TOTAL ENVIRONMENT
- The impact of human activities and lifestyles on the interlinked microbiota and health of humans and of ecosystems
- (2018) Lucette Flandroy et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Colonization, Infection, and the Accessory Genome of Klebsiella pneumoniae
- (2018) Rebekah M. Martin et al. Frontiers in Cellular and Infection Microbiology
- First report of an OXA-48 and CTX-M-213-producing Kluyvera spp. clone recovered from patients admitted in a University Hospital in Madrid, Spain
- (2018) Marta Hernández-García et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Related carbapenemase-producing Klebsiella isolates detected in both a hospital and associated aquatic environment in Sweden
- (2018) Faisal Ahmad Khan et al. EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES
- Klebsiella grimontii, a New Species Acquired Carbapenem Resistance
- (2018) Lu Liu et al. Frontiers in Microbiology
- Prediction of the intestinal resistome by a three-dimensional structure-based method
- (2018) Etienne Ruppé et al. Nature Microbiology
- OUP accepted manuscript
- (2017) JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Environmental Escherichia coli : ecology and public health implications-a review
- (2017) J. Jang et al. JOURNAL OF APPLIED MICROBIOLOGY
- Colonizing opportunistic pathogens (COPs): The beasts in all of us
- (2017) Lance B. Price et al. PLoS Pathogens
- Study of mcr-1 Gene-Mediated Colistin Resistance in Enterobacteriaceae Isolated from Humans and Animals in Different Countries
- (2017) Linda Hadjadj et al. Genes
- The antibiotic resistome: gene flow in environments, animals and human beings
- (2017) Yongfei Hu et al. Frontiers of Medicine
- Early animal farming and zoonotic disease dynamics: modelling brucellosis transmission in Neolithic goat populations
- (2017) Guillaume Fournié et al. Royal Society Open Science
- Why prokaryotes have pangenomes
- (2017) James O. McInerney et al. Nature Microbiology
- The microbiome beyond the horizon of ecological and evolutionary theory
- (2017) Britt Koskella et al. Nature Ecology & Evolution
- Comparison of Fecal Microbial Composition and Antibiotic Resistance Genes from Swine, Farm Workers and the Surrounding Villagers
- (2017) Jian Sun et al. Scientific Reports
- Genomic and metagenomic technologies to explore the antibiotic resistance mobilome
- (2016) José L. Martínez et al. Annals of the New York Academy of Sciences
- Plasmid-Mediatedmcr-1Gene in Colistin-Resistant Clinical Isolates of Klebsiella pneumoniae in France and Laos
- (2016) Jean-Marc Rolain et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- The Bacterial Mobile Resistome Transfer Network Connecting the Animal and Human Microbiomes
- (2016) Yongfei Hu et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- AcCNET (Accessory Genome Constellation Network): comparative genomics software for accessory genome analysis using bipartite networks
- (2016) Val F. Lanza et al. BIOINFORMATICS
- “Every Gene Is Everywhere but the Environment Selects”: Global Geolocalization of Gene Sharing in Environmental Samples through Network Analysis
- (2016) Marco Fondi et al. Genome Biology and Evolution
- Emerging role of Raoultella ornithinolytica in human infections: a series of cases and review of the literature
- (2016) Piseth Seng et al. INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES
- Genome-based phylogeny and taxonomy of the ‘Enterobacteriales’: proposal for Enterobacterales ord. nov. divided into the families Enterobacteriaceae, Erwiniaceae fam. nov., Pectobacteriaceae fam. nov., Yersiniaceae fam. nov., Hafniaceae fam. nov., Morganellaceae fam. nov., and Budviciaceae fam. nov.
- (2016) INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Microbiome evolution along divergent branches of the vertebrate tree of life: what is known and unknown
- (2016) Timothy J. Colston et al. MOLECULAR ECOLOGY
- Interconnected microbiomes and resistomes in low-income human habitats
- (2016) Erica C. Pehrsson et al. NATURE
- Durable coexistence of donor and recipient strains after fecal microbiota transplantation
- (2016) Simone S. Li et al. SCIENCE
- Antibiotic resistance is the quintessential One Health issue
- (2016) T. P. Robinson et al. TRANSACTIONS OF THE ROYAL SOCIETY OF TROPICAL MEDICINE AND HYGIENE
- Antimicrobial Resistance in Agriculture
- (2016) Sophie Thanner et al. mBio
- Getting the Hologenome Concept Right: an Eco-Evolutionary Framework for Hosts and Their Microbiomes
- (2016) Kevin R. Theis et al. mSystems
- Pan-genomic analysis to redefine species and subspecies based on quantum discontinuous variation: the Klebsiella paradigm
- (2015) Aurélia Caputo et al. Biology Direct
- Quantitative Imaging of Gut Microbiota Spatial Organization
- (2015) Kristen A. Earle et al. Cell Host & Microbe
- Microbial ecosystems are dominated by specialist taxa
- (2015) Mahendra Mariadassou et al. ECOLOGY LETTERS
- Insights from 20 years of bacterial genome sequencing
- (2015) Miriam Land et al. FUNCTIONAL & INTEGRATIVE GENOMICS
- PanCoreGen — Profiling, detecting, annotating protein-coding genes in microbial genomes
- (2015) Sandip Paul et al. GENOMICS
- Tackling antibiotic resistance: the environmental framework
- (2015) Thomas U. Berendonk et al. NATURE REVIEWS MICROBIOLOGY
- Genomic analysis of diversity, population structure, virulence, and antimicrobial resistance inKlebsiella pneumoniae, an urgent threat to public health
- (2015) Kathryn E. Holt et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Interchange of entire communities: microbial community coalescence
- (2015) Matthias C. Rillig et al. TRENDS IN ECOLOGY & EVOLUTION
- Causes and interventions: need of a multiparametric analysis of microbial ecobiology
- (2015) Fernando Baquero Environmental Microbiology Reports
- Zeta Diversity as a Concept and Metric That Unifies Incidence-Based Biodiversity Patterns
- (2014) Cang Hui et al. AMERICAN NATURALIST
- Development of High-Performance Chemical Isotope Labeling LC–MS for Profiling the Human Fecal Metabolome
- (2014) Wei Xu et al. ANALYTICAL CHEMISTRY
- Bacterial phylogeny structures soil resistomes across habitats
- (2014) Kevin J. Forsberg et al. NATURE
- What is a resistance gene? Ranking risk in resistomes
- (2014) José L. Martínez et al. NATURE REVIEWS MICROBIOLOGY
- Recovery of the Gut Microbiome following Fecal Microbiota Transplantation
- (2014) A. M. Seekatz et al. mBio
- Microbial Succession in the Gut: Directional Trends of Taxonomic and Functional Change in a Birth Cohort of Spanish Infants
- (2014) Yvonne Vallès et al. PLoS Genetics
- Deciphering microbial interactions and detecting keystone species with co-occurrence networks
- (2014) David Berry et al. Frontiers in Microbiology
- The Intestinal Microbiome in Early Life: Health and Disease
- (2014) Marie-Claire Arrieta et al. Frontiers in Immunology
- Horizontal gene transfer in the human gastrointestinal tract: potential spread of antibiotic resistance genes
- (2014) Jennifer R Huddleston Infection and Drug Resistance
- Sympatric chimpanzees and gorillas harbor convergent gut microbial communities
- (2013) A. H. Moeller et al. GENOME RESEARCH
- Diet rapidly and reproducibly alters the human gut microbiome
- (2013) Lawrence A. David et al. NATURE
- SalmonellaInteractions with Plants and Their Associated Microbiota
- (2013) Maria T. Brandl et al. PHYTOPATHOLOGY
- Animals in a bacterial world, a new imperative for the life sciences
- (2013) Margaret McFall-Ngai et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Antibiotic resistance shaping multi-level population biology of bacteria
- (2013) Fernando Baquero et al. Frontiers in Microbiology
- The intrinsic resistome of bacterial pathogens
- (2013) Jorge Olivares et al. Frontiers in Microbiology
- The microbiome as a human organ
- (2012) F. Baquero et al. CLINICAL MICROBIOLOGY AND INFECTION
- Testing the Infinitely Many Genes Model for the Evolution of the Bacterial Core Genome and Pangenome
- (2012) R. Eric Collins et al. MOLECULAR BIOLOGY AND EVOLUTION
- The Application of Ecological Theory Toward an Understanding of the Human Microbiome
- (2012) E. K. Costello et al. SCIENCE
- Metabolic Reconstruction for Metagenomic Data and Its Application to the Human Microbiome
- (2012) Sahar Abubucker et al. PLoS Computational Biology
- The genetic integrity of bacterial species: the core genome and the accessory genome, two different stories
- (2012) Bo Segerman Frontiers in Cellular and Infection Microbiology
- Natural Antibiotic Resistance and Contamination by Antibiotic Resistance Determinants: The Two Ages in the Evolution of Resistance to Antimicrobials
- (2012) José L. Martínez Frontiers in Microbiology
- Extensive recombination events and horizontal gene transfer shaped the Legionella pneumophila genomes
- (2011) Laura Gomez-Valero et al. BMC GENOMICS
- Evidence for Occurrence, Persistence, and Growth Potential of Escherichia coli and Enterococci in Hawaii^|^rsquo;s Soil Environments
- (2011) Muruleedhara N. Byappanahalli et al. MICROBES AND ENVIRONMENTS
- Ecology drives a global network of gene exchange connecting the human microbiome
- (2011) Chris S. Smillie et al. NATURE
- Antibiotic resistance is ancient
- (2011) Vanessa M. D’Costa et al. NATURE
- Genome sequencing of environmental Escherichia coli expands understanding of the ecology and speciation of the model bacterial species
- (2011) C. Luo et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Global food demand and the sustainable intensification of agriculture
- (2011) D. Tilman et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Acquired Antibiotic Resistance Genes: An Overview
- (2011) Angela H. A. M. van Hoek et al. Frontiers in Microbiology
- Pan-genome sequence analysis using Panseq: an online tool for the rapid analysis of core and accessory genomic regions
- (2010) Chad Laing et al. BMC BIOINFORMATICS
- The antibiotic resistome
- (2010) Gerard D Wright Expert Opinion on Drug Discovery
- Contrasts between habitat generalists and specialists: an empirical extension to the basic metacommunity framework
- (2009) Shubha N. Pandit et al. ECOLOGY
- Evidence of Increasing Antibiotic Resistance Gene Abundances in Archived Soils since 1940
- (2009) Charles W. Knapp et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Conjugative plasmids: vessels of the communal gene pool
- (2009) A. Norman et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Bringing the Hutchinsonian niche into the 21st century: Ecological and evolutionary perspectives
- (2009) R. D. Holt PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Horizontal gene transfer in evolution: facts and challenges
- (2009) L. Boto PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Estimating the size of the bacterial pan-genome
- (2009) Pascal Lapierre et al. TRENDS IN GENETICS
- Antibiotics and antibiotic resistance in water environments
- (2008) Fernando Baquero et al. CURRENT OPINION IN BIOTECHNOLOGY
- Comparative genomics: the bacterial pan-genome
- (2008) Hervé Tettelin et al. CURRENT OPINION IN MICROBIOLOGY
- Worlds within worlds: evolution of the vertebrate gut microbiota
- (2008) Ruth E. Ley et al. NATURE REVIEWS MICROBIOLOGY
- The Neglected Intrinsic Resistome of Bacterial Pathogens
- (2008) Alicia Fajardo et al. PLoS One
- Resistance, resilience, and redundancy in microbial communities
- (2008) S. D. Allison et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Identifying the fundamental units of bacterial diversity: A paradigm shift to incorporate ecology into bacterial systematics
- (2008) A. Koeppel et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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