De novo identification of satellite DNAs in the sequenced genomes of Drosophila virilis and D. americana using the RepeatExplorer and TAREAN pipelines

Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome

(2019) Ricardo Utsunomia et al.   Scientific Reports

The cellular mechanisms and consequences of centromere drive

(2018) Lisa E Kursel et al.   CURRENT OPINION IN CELL BIOLOGY

Variable Rates of Simple Satellite Gains across the Drosophila Phylogeny

(2018) Kevin H -C Wei et al.   MOLECULAR BIOLOGY AND EVOLUTION

Satellite DNA in Vicia faba is characterized by remarkable diversity in its sequence composition, association with centromeres, and replication timing

(2018) Laura Ávila Robledillo et al.   Scientific Reports

Single-molecule sequencing resolves the detailed structure of complex satellite DNA loci inDrosophila melanogaster

(2017) Daniel E. Khost et al.   GENOME RESEARCH

TAREAN: a computational tool for identification and characterization of satellite DNA from unassembled short reads

(2017) Petr Novák et al.   NUCLEIC ACIDS RESEARCH

High-throughput analysis of the satellitome revealed enormous diversity of satellite DNAs in the neo-Y chromosome of the cricket Eneoptera surinamensis

(2017) Octavio Manuel Palacios-Gimenez et al.   Scientific Reports

Hawaiian Drosophila genomes: size variation and evolutionary expansions

(2016) Elysse M. Craddock et al.   GENETICA

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update

(2016) Enis Afgan et al.   NUCLEIC ACIDS RESEARCH

Helitrons shaping the genomic architecture of Drosophila: enrichment of DINE-TR1 in α- and β-heterochromatin, satellite DNA emergence, and piRNA expression

(2015) Guilherme B. Dias et al.   CHROMOSOME RESEARCH

Structural and functional liaisons between transposable elements and satellite DNAs

(2015) Nevenka Meštrović et al.   CHROMOSOME RESEARCH

Repetitive DNA in eukaryotic genomes

(2015) Maria Assunta Biscotti et al.   CHROMOSOME RESEARCH

Genome-wide analysis of tandem repeats inTribolium castaneumgenome reveals abundant and highly dynamic tandem repeat families with satellite DNA features in euchromatic chromosomal arms

(2015) Martina Pavlek et al.   DNA RESEARCH

Next-generation sequencing detects repetitive elements expansion in giant genomes of annual killifish genus Austrolebias (Cyprinodontiformes, Rivulidae)

(2015) G. García et al.   GENETICA

Tetris Is a Foldback Transposon that Provided the Building Blocks for an Emerging Satellite DNA of Drosophila virilis

(2014) Guilherme B. Dias et al.   Genome Biology and Evolution

Repetitive centromeric satellite RNA is essential for kinetochore formation and cell division

(2014) Silvana Rošić et al.   JOURNAL OF CELL BIOLOGY

Correlated variation and population differentiation in satellite DNA abundance among lines ofDrosophila melanogaster

(2014) Kevin H.-C. Wei et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RepeatExplorer: a Galaxy-based web server for genome-wide characterization of eukaryotic repetitive elements from next-generation sequence reads

(2013) P. Novak et al.   BIOINFORMATICS

Medium-sized tandem repeats represent an abundant component of the Drosophila virilis genome

(2013) Murat A Abdurashitov et al.   BMC GENOMICS

Drosophila americana as a Model Species for Comparative Studies on the Molecular Basis of Phenotypic Variation

(2013) Nuno A. Fonseca et al.   Genome Biology and Evolution

Comparative analysis of tandem repeats from hundreds of species reveals unique insights into centromere evolution

(2013) Daniël P Melters et al.   GENOME BIOLOGY

The 1.688 Repetitive DNA of Drosophila: Concerted Evolution at Different Genomic Scales and Association with Genes

(2011) Gustavo C. S. Kuhn et al.   MOLECULAR BIOLOGY AND EVOLUTION

Resolving the phylogenetic relationships and evolutionary history of the Drosophila virilis group using multilocus data

(2011) Ramiro Morales-Hojas et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Repetitive DNA and next-generation sequencing: computational challenges and solutions

(2011) Todd J. Treangen et al.   NATURE REVIEWS GENETICS

Species-Specific Heterochromatin Prevents Mitotic Chromosome Segregation to Cause Hybrid Lethality in Drosophila

(2009) Patrick M. Ferree et al.   PLOS BIOLOGY

Sequence analysis, chromosomal distribution and long-range organization show that rapid turnover of new and old pBuM satellite DNA repeats leads to different patterns of variation in seven species of the Drosophila buzzatii cluster

(2008) Gustavo C. S. Kuhn et al.   CHROMOSOME RESEARCH

Genome size diversity in the family Drosophilidae

(2008) T R Gregory et al.   HEREDITY