Helitrons shaping the genomic architecture of Drosophila: enrichment of DINE-TR1 in α- and β-heterochromatin, satellite DNA emergence, and piRNA expression
出版年份 2015 全文链接
标题
Helitrons shaping the genomic architecture of Drosophila: enrichment of DINE-TR1 in α- and β-heterochromatin, satellite DNA emergence, and piRNA expression
作者
关键词
<em class=EmphasisTypeItalic >Drosophila virilis</em>, <em class=EmphasisTypeItalic >Drosophila americana</em>, Transposable element, Genome evolution, <em class=EmphasisTypeItalic >Helitrons</em>
出版物
CHROMOSOME RESEARCH
Volume 23, Issue 3, Pages 597-613
出版商
Springer Nature
发表日期
2015-09-26
DOI
10.1007/s10577-015-9480-x
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注意：仅列出部分参考文献，下载原文获取全部文献信息。- Transcription of tandemly repetitive DNA: functional roles
- (2015) Maria Assunta Biscotti et al. CHROMOSOME RESEARCH
- Specific features in linear and spatial organizations of pericentromeric heterochromatin regions in polytene chromosomes of the closely related species Drosophila virilis and D. kanekoi (Diptera: Drosophilidae)
- (2015) Irina Wasserlauf et al. GENETICA
- Drosophila Muller F Elements Maintain a Distinct Set of Genomic Properties Over 40 Million Years of Evolution
- (2015) Wilson Leung et al. G3-Genes Genomes Genetics
- The Role of piRNA-Mediated Epigenetic Silencing in the Population Dynamics of Transposable Elements in Drosophila melanogaster
- (2015) Yuh Chwen G. Lee PLoS Genetics
- The secret lives of Drosophila flies
- (2015) Therese Ann Markow eLife
- The draft genome of the pest tephritid fruit fly Bactrocera tryoni: resources for the genomic analysis of hybridising species
- (2015) Anthony Gilchrist et al. BMC GENOMICS
- Genomics of Ecological Adaptation in Cactophilic Drosophila
- (2015) Yolanda Guillén et al. Genome Biology and Evolution
- Centromere identity from the DNA point of view
- (2014) Miroslav Plohl et al. CHROMOSOMA
- Satellite DNA as a Driver of Population Divergence in the Red Flour Beetle Tribolium castaneum
- (2014) Isidoro Feliciello et al. Genome Biology and Evolution
- Tetris Is a Foldback Transposon that Provided the Building Blocks for an Emerging Satellite DNA of Drosophila virilis
- (2014) Guilherme B. Dias et al. Genome Biology and Evolution
- The chromatin landscape of Drosophila: comparisons between species, sexes, and chromosomes
- (2014) E. J. Brown et al. GENOME RESEARCH
- Repetitive centromeric satellite RNA is essential for kinetochore formation and cell division
- (2014) Silvana Rošić et al. JOURNAL OF CELL BIOLOGY
- Insights on genome size evolution from a miniature inverted repeat transposon driving a satellite DNA
- (2014) Thibault Scalvenzi et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- siRNAs from an X-linked satellite repeat promote X-chromosome recognition inDrosophila melanogaster
- (2014) Debashish U. Menon et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genome Sequence of the Tsetse Fly (Glossina morsitans): Vector of African Trypanosomiasis
- (2014) et al. SCIENCE
- A Transgenerational Process Defines piRNA Biogenesis in Drosophila virilis
- (2014) Adrien Le Thomas et al. Cell Reports
- DINE-1, the highest copy number repeats in Drosophila melanogaster are non-autonomous endonuclease-encoding rolling-circle transposable elements (Helentrons)
- (2014) Jainy Thomas et al. Mobile DNA
- Targeting heterochromatin formation to transposable elements in Drosophila: Potential roles of the piRNA system
- (2013) M. Sentmanat et al. BIOCHEMISTRY-MOSCOW
- Medium-sized tandem repeats represent an abundant component of the Drosophila virilis genome
- (2013) Murat A Abdurashitov et al. BMC GENOMICS
- A Major Epigenetic Programming Mechanism Guided by piRNAs
- (2013) Xiao A. Huang et al. DEVELOPMENTAL CELL
- Genomic regions harboring insecticide resistance-associated Cyp genes are enriched by transposable element fragments carrying putative transcription factor binding sites in two sibling Drosophila species
- (2013) Claudia M.A. Carareto et al. GENE
- Tandem Repeat-Containing MITEs in the Clam Donax trunculus
- (2013) Eva Šatović et al. Genome Biology and Evolution
- Linking Genomics and Ecology to Investigate the Complex Evolution of an Invasive Drosophila Pest
- (2013) Lino Ometto et al. Genome Biology and Evolution
- Drosophila americana as a Model Species for Comparative Studies on the Molecular Basis of Phenotypic Variation
- (2013) Nuno A. Fonseca et al. Genome Biology and Evolution
- Dosage Compensation via Transposable Element Mediated Rewiring of a Regulatory Network
- (2013) C. E. Ellison et al. SCIENCE
- Mechanism for full-length RNA processing of Arabidopsis genes containing intragenic heterochromatin
- (2013) Hidetoshi Saze et al. Nature Communications
- Comparative analysis of tandem repeats from hundreds of species reveals unique insights into centromere evolution
- (2013) Daniël P Melters et al. GENOME BIOLOGY
- jModelTest 2: more models, new heuristics and parallel computing
- (2012) Diego Darriba et al. NATURE METHODS
- Ectopic assembly of heterochromatin in Drosophila melanogaster triggered by transposable elements
- (2012) M. F. Sentmanat et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Satellite DNA-Like Elements Associated With Genes Within Euchromatin of the Beetle Tribolium castaneum
- (2012) Josip Brajković et al. G3-Genes Genomes Genetics
- Resolving the phylogenetic relationships and evolutionary history of the Drosophila virilis group using multilocus data
- (2011) Ramiro Morales-Hojas et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Heterochromatin boundaries are hotspots for de novo kinetochore formation
- (2011) Agata M. Olszak et al. NATURE CELL BIOLOGY
- PIWI-interacting small RNAs: the vanguard of genome defence
- (2011) Mikiko C. Siomi et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- T-Coffee: a web server for the multiple sequence alignment of protein and RNA sequences using structural information and homology extension
- (2011) P. Di Tommaso et al. NUCLEIC ACIDS RESEARCH
- Organisation of the plant genome in chromosomes
- (2011) J. S. Pat Heslop-Harrison et al. PLANT JOURNAL
- Chromosomes, Conflict, and Epigenetics: Chromosomal Speciation Revisited
- (2010) Judith D. Brown et al. Annual Review of Genomics and Human Genetics
- Telomere maintenance in Drosophila: Rapid transposon evolution at chromosome ends
- (2010) Alfredo Villasante et al. CELL CYCLE
- Characterization and Genomic Organization of PERI, a Repetitive DNA in the Drosophila buzzatii Cluster Related to DINE-1 Transposable Elements and Highly Abundant in the Sex Chromosomes
- (2010) G.C.S. Kuhn et al. CYTOGENETIC AND GENOME RESEARCH
- Population Genomics of Transposable Elements in Drosophila melanogaster
- (2010) D. A. Petrov et al. MOLECULAR BIOLOGY AND EVOLUTION
- Small RNA-based silencing strategies for transposons in the process of invading Drosophila species
- (2010) N. V. Rozhkov et al. RNA
- Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
- (2010) Jeremy Goecks et al. GENOME BIOLOGY
- Multiple Roles for Heterochromatin Protein 1 Genes in Drosophila
- (2009) Danielle Vermaak et al. Annual Review of Genetics
- Jalview Version 2--a multiple sequence alignment editor and analysis workbench
- (2009) A. M. Waterhouse et al. BIOINFORMATICS
- Major Evolutionary Transitions in Centromere Complexity
- (2009) Harmit S. Malik et al. CELL
- Hypervariable 3′ UTR region of plant LTR-retrotransposons as a source of novel satellite repeats
- (2009) Jiří Macas et al. GENE
- Small silencing RNAs: an expanding universe
- (2009) Megha Ghildiyal et al. NATURE REVIEWS GENETICS
- Species-Specific Heterochromatin Prevents Mitotic Chromosome Segregation to Cause Hybrid Lethality in Drosophila
- (2009) Patrick M. Ferree et al. PLOS BIOLOGY
- Computational prediction and molecular confirmation of Helitron transposons in the maize genome
- (2008) Chunguang Du et al. BMC GENOMICS
- Sequence analysis, chromosomal distribution and long-range organization show that rapid turnover of new and old pBuM satellite DNA repeats leads to different patterns of variation in seven species of the Drosophila buzzatii cluster
- (2008) Gustavo C. S. Kuhn et al. CHROMOSOME RESEARCH
- Revisiting horizontal transfer of transposable elements in Drosophila
- (2008) E L S Loreto et al. HEREDITY
- Genome size diversity in the family Drosophilidae
- (2008) T R Gregory et al. HEREDITY
- Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
- (2008) Andrew Grimson et al. NATURE
- An Epigenetic Role for Maternally Inherited piRNAs in Transposon Silencing
- (2008) J. Brennecke et al. SCIENCE
- Polymorphic Y Chromosomes Harbor Cryptic Variation with Manifold Functional Consequences
- (2008) B. Lemos et al. SCIENCE
- Abundant and species-specific DINE-1 transposable elements in 12 Drosophila genomes
- (2008) Hsiao-Pei Yang et al. GENOME BIOLOGY
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