Transcriptomic Analysis Reveals the Roles of Detoxification Systems in Response to Mercury in Chromera velia

Ploidy and Number of Chromosomes in the Alveolate Alga Chromera velia

(2018) Jan Vazač et al.   PROTIST

Traversing the Links between Heavy Metal Stress and Plant Signaling

(2018) Siddhi K. Jalmi et al.   Frontiers in Plant Science

Ascorbic acid protects Coccomyxa subellipsoidea against metal toxicity through modulation of ROS/NO balance and metal uptake

(2017) Jozef Kováčik et al.   JOURNAL OF HAZARDOUS MATERIALS

Morphological and Physiological Responses of Plants to Cadmium Toxicity: A Review

(2017) Shanying HE et al.   PEDOSPHERE

Comparative transcriptomic analysis reveals the roles of ROS scavenging genes in response to cadmium in two pak choi cultivars

(2017) Rugang Yu et al.   Scientific Reports

A Tissue-Mapped Axolotl De Novo Transcriptome Enables Identification of Limb Regeneration Factors

(2017) Donald M. Bryant et al.   Cell Reports

GmWRKY31 and GmHDL56 Enhances Resistance to Phytophthora sojae by Regulating Defense-Related Gene Expression in Soybean

(2017) Sujie Fan et al.   Frontiers in Plant Science

FTIR characterization and antioxidant activity of water soluble crude polysaccharides of Sri Lankan marine algae

(2017) I. P. Shanura Fernando et al.   ALGAE

Extensive gain and loss of photosystem I subunits in chromerid algae, photosynthetic relatives of apicomplexans

(2017) Roman Sobotka et al.   Scientific Reports

Diversity of ABC transporter genes across the plant kingdom and their potential utility in biotechnology

(2016) Thomas S. Lane et al.   BMC BIOTECHNOLOGY

Transcription factors in microalgae: genome-wide prediction and comparative analysis

(2016) Stanislas Thiriet-Rupert et al.   BMC GENOMICS

Physiological characterization of Chlamydomonas reinhardtii acclimated to chronic stress induced by Ag, Cd, Cr, Cu and Hg ions

(2016) Beatrycze Nowicka et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Overexpression of a novel NAC-type tomato transcription factor, SlNAM1 , enhances the chilling stress tolerance of transgenic tobacco

(2016) Xiao-Dong Li et al.   JOURNAL OF PLANT PHYSIOLOGY

NADPH oxidases differentially regulate ROS metabolism and nutrient uptake under cadmium toxicity

(2016) D. K. Gupta et al.   PLANT CELL AND ENVIRONMENT

Zinc-Finger Transcription Factor ZAT6 Positively Regulates Cadmium Tolerance through the Glutathione-Dependent Pathway in Arabidopsis

(2016) Jian Chen et al.   PLANT PHYSIOLOGY

Antioxidant activity and gene expression associated with cadmium toxicity in wheat affected by mycorrhizal fungus

(2016) Saleh Shahabivand et al.   Zemdirbyste-Agriculture

Overexpression of ThVHAc1 and its potential upstream regulator, ThWRKY7, improved plant tolerance of Cadmium stress

(2016) Guiyan Yang et al.   Scientific Reports

Abiotic Stress Tolerance of Charophyte Green Algae: New Challenges for Omics Techniques

(2016) Andreas Holzinger et al.   Frontiers in Plant Science

Ethylene Response Factor TERF1, Regulated by ETHYLENE-INSENSITIVE3-like Factors, Functions in Reactive Oxygen Species (ROS) Scavenging in Tobacco (Nicotiana tabacum L.)

(2016) Hongbo Zhang et al.   Scientific Reports

Cadmium stress antioxidant responses and root-to-shoot communication in grafted tomato plants

(2015) Priscila Lupino Gratão et al.   BIOMETALS

RNA-seq for gene identification and transcript profiling in relation to root growth of bermudagrass (Cynodon dactylon) under salinity stress

(2015) Longxing Hu et al.   BMC GENOMICS

ROS and RNS in plant physiology: an overview

(2015) Luis A. del Río   JOURNAL OF EXPERIMENTAL BOTANY

Plastid proteome prediction for diatoms and other algae with secondary plastids of the red lineage

(2015) Ansgar Gruber et al.   PLANT JOURNAL

Profiling of the Early Nitrogen Stress Response in the Diatom Phaeodactylum tricornutum Reveals a Novel Family of RING-Domain Transcription Factors

(2015) Michiel Matthijs et al.   PLANT PHYSIOLOGY

Genome-wide expression analysis offers new insights into the origin and evolution of Physcomitrella patens stress response

(2015) Basel Khraiwesh et al.   Scientific Reports

Transcriptome analysis of genes involved in defence response in Polyporus umbellatus with Armillaria mellea infection

(2015) Meng-Meng Liu et al.   Scientific Reports

Chromerid genomes reveal the evolutionary path from photosynthetic algae to obligate intracellular parasites

(2015) Yong H Woo et al.   eLife

ROS Regulation During Abiotic Stress Responses in Crop Plants

(2015) Jun You et al.   Frontiers in Plant Science

Novel type of red-shifted chlorophyll a antenna complex from Chromera velia. I. Physiological relevance and functional connection to photosystems

(2014) Eva Kotabová et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Transcriptomic and metabolomic analysis of copper stress acclimation in Ectocarpus siliculosus highlights signaling and tolerance mechanisms in brown algae

(2014) Andrés Ritter et al.   BMC PLANT BIOLOGY

Role of Protein–Protein Interactions in Cytochrome P450-Mediated Drug Metabolism and Toxicity

(2014) Sylvie E. Kandel et al.   CHEMICAL RESEARCH IN TOXICOLOGY

Responses to Oxidative and Heavy Metal Stresses in Cyanobacteria: Recent Advances

(2014) Corinne Cassier-Chauvat et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

A global ocean inventory of anthropogenic mercury based on water column measurements

(2014) Carl H. Lamborg et al.   NATURE

Unusual features of the high light acclimation of Chromera velia

(2014) Marcus Mann et al.   PHOTOSYNTHESIS RESEARCH

Transcriptional control of ROS homeostasis by KUODA1 regulates cell expansion during leaf development

(2014) Dandan Lu et al.   Nature Communications

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

The genome portal of the Department of Energy Joint Genome Institute: 2014 updates

(2013) Henrik Nordberg et al.   NUCLEIC ACIDS RESEARCH

Microbial cytochromes P450: biodiversity and biotechnology. Where do cytochromes P450 come from, what do they do and what can they do for us?

(2013) S. L. Kelly et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Ethylene Response Factor 6 Is a Regulator of Reactive Oxygen Species Signaling in Arabidopsis

(2013) Nasser Sewelam et al.   PLoS One

Heavy metal-induced oxidative damage, defense reactions, and detoxification mechanisms in plants

(2012) Oksana Sytar et al.   ACTA PHYSIOLOGIAE PLANTARUM

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Domain enhanced lookup time accelerated BLAST

(2012) Grzegorz M Boratyn et al.   Biology Direct

Mercury toxicity, molecular response and tolerance in higher plants

(2012) Jian Chen et al.   BIOMETALS

Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation

(2012) Davis J. McCarthy et al.   NUCLEIC ACIDS RESEARCH

Reactive Oxygen Species and Autophagy in Plants and Algae

(2012) M. E. Perez-Perez et al.   PLANT PHYSIOLOGY

Photosynthesis in Chromera velia Represents a Simple System with High Efficiency

(2012) Antonietta Quigg et al.   PLoS One

Overexpression of TaNAC69 Leads to Enhanced Transcript Levels of Stress Up-Regulated Genes and Dehydration Tolerance in Bread Wheat

(2011) Gang-Ping Xue et al.   Molecular Plant

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

Regulation of Tolerance of Chlamydomonas reinhardtii to Heavy Metal Toxicity by Heme Oxygenase-1 and Carbon Monoxide

(2011) Y. Y. Wei et al.   PLANT AND CELL PHYSIOLOGY

Co-Overexpression FIT with AtbHLH38 or AtbHLH39 in Arabidopsis-Enhanced Cadmium Tolerance via Increased Cadmium Sequestration in Roots and Improved Iron Homeostasis of Shoots

(2011) H. Wu et al.   PLANT PHYSIOLOGY

REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms

(2011) Fran Supek et al.   PLoS One

Oxidative stress induced by cadmium in Nicotiana tabacum L.: effects on growth parameters, oxidative damage and antioxidant responses in different plant parts

(2010) Luisa Louro Martins et al.   ACTA PHYSIOLOGIAE PLANTARUM

Mercury-induced oxidative stress and impact on antioxidant enzymes in Chlamydomonas reinhardtii

(2010) Abdelrahman Elbaz et al.   ECOTOXICOLOGY

2′,7′-Dichlorodihydrofluorescein as a fluorescent probe for reactive oxygen species measurement: Forty years of application and controversy

(2010) Xiuping Chen et al.   FREE RADICAL RESEARCH

Effect of Nutrient Concentration and Salinity on Immotile-Motile Transformation of Chromera velia

(2010) JIN TAO GUO et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Morphology and Ultrastructure of Multiple Life Cycle Stages of the Photosynthetic Relative of Apicomplexa, Chromera velia

(2010) Miroslav Oborník et al.   PROTIST

Oxidative stress and antioxidant defenses in two green microalgae exposed to copper

(2009) Sebastián E. Sabatini et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Phytotoxicity of biosolids and screening of selected plant species with potential for mercury phytoextraction

(2009) Cristina Lomonte et al.   JOURNAL OF HAZARDOUS MATERIALS

A novel bZIP gene from Tamarix hispida mediates physiological responses to salt stress in tobacco plants

(2009) Yucheng Wang et al.   JOURNAL OF PLANT PHYSIOLOGY

Effect of Medicago sativa ferritin gene on stress tolerance in transgenic grapevine

(2009) A. Zok et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Nitric Oxide Is Involved in Cadmium-Induced Programmed Cell Death in Arabidopsis Suspension Cultures

(2009) R. De Michele et al.   PLANT PHYSIOLOGY

Genomic Footprints of a Cryptic Plastid Endosymbiosis in Diatoms

(2009) A. Moustafa et al.   SCIENCE

Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress

(2009) Simon M Dittami et al.   GENOME BIOLOGY

Bioaccumulation and physiological effects of mercury in Pteris vittata and Nephrolepis exaltata

(2008) Jian Chen et al.   ECOTOXICOLOGY

Biochemical biomarkers in algae and marine pollution: A review

(2008) Moacir A. Torres et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

A photosynthetic alveolate closely related to apicomplexan parasites

(2008) Robert B. Moore et al.   NATURE

Transcriptome analysis of Medicago truncatula leaf senescence: similarities and differences in metabolic and transcriptional regulations as compared with Arabidopsis , nodule senescence and nitric oxide signalling

(2008) Roberto De Michele et al.   NEW PHYTOLOGIST

Biological detection and analysis of mercury toxicity to alfalfa (Medicago sativa) plants

(2007) Zhao Sheng Zhou et al.   CHEMOSPHERE