标题
Establishing microbial composition measurement standards with reference frames
作者
关键词
-
出版物
Nature Communications
Volume 10, Issue 1, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2019-06-20
DOI
10.1038/s41467-019-10656-5
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- The nonlesional skin surface distinguishes atopic dermatitis with food allergy as a unique endotype
- (2019) Donald Y. M. Leung et al. Science Translational Medicine
- Absolute quantitation of microbiota abundance in environmental samples
- (2018) Andrzej Tkacz et al. Microbiome
- Balances: a New Perspective for Microbiome Analysis
- (2018) J. Rivera-Pinto et al. mSystems
- Qiita: rapid, web-enabled microbiome meta-analysis
- (2018) Antonio Gonzalez et al. NATURE METHODS
- Analysis and correction of compositional bias in sparse sequencing count data
- (2018) M. Senthil Kumar et al. BMC GENOMICS
- gcMeta: a Global Catalogue of Metagenomics platform to support the archiving, standardization and analysis of microbiome data
- (2018) Wenyu Shi et al. NUCLEIC ACIDS RESEARCH
- Correction to: Dynamic linear models guide design and analysis of microbiota studies within artificial human guts
- (2018) Justin D. Silverman et al. Microbiome
- Quantitative microbiome profiling links gut community variation to microbial load
- (2017) Doris Vandeputte et al. NATURE
- Staphylococcus aureus and Staphylococcus epidermidis strain diversity underlying pediatric atopic dermatitis
- (2017) Allyson L. Byrd et al. Science Translational Medicine
- A phylogenetic transform enhances analysis of compositional microbiota data
- (2017) Justin D Silverman et al. eLife
- Microbiome Datasets Are Compositional: And This Is Not Optional
- (2017) Gregory B. Gloor et al. Frontiers in Microbiology
- Phylogenetic factorization of compositional data yields lineage-level associations in microbiome datasets
- (2017) Alex D. Washburne et al. PeerJ
- Balance Trees Reveal Microbial Niche Differentiation
- (2017) James T. Morton et al. mSystems
- Deblur Rapidly Resolves Single-Nucleotide Community Sequence Patterns
- (2017) Amnon Amir et al. mSystems
- It's all relative: analyzing microbiome data as compositions
- (2016) Gregory B. Gloor et al. ANNALS OF EPIDEMIOLOGY
- Absolute quantification of microbial taxon abundances
- (2016) Ruben Props et al. ISME Journal
- Skin Microbiome Surveys Are Strongly Influenced by Experimental Design
- (2016) Jacquelyn S. Meisel et al. JOURNAL OF INVESTIGATIVE DERMATOLOGY
- Biogeography of a human oral microbiome at the micron scale
- (2016) Jessica L. Mark Welch et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A method for simultaneous measurement of soil bacterial abundances and community composition via 16S rRNA gene sequencing
- (2016) Wenke Smets et al. SOIL BIOLOGY & BIOCHEMISTRY
- Evaluating variation in human gut microbiota profiles due to DNA extraction method and inter-subject differences
- (2015) Brett Wagner Mackenzie et al. Frontiers in Microbiology
- New craniodental remains ofWakaleo alcootaensis(Diprotodontia: Thylacoleonidae) a carnivorous marsupial from the late Miocene Alcoota Local Fauna of the Northern Territory, Australia
- (2015) Adam M. Yates PeerJ
- Measuring salivary flow
- (2014) Mahvash Navazesh et al. JOURNAL OF THE AMERICAN DENTAL ASSOCIATION
- Biogeographic patterns in below-ground diversity in New York City's Central Park are similar to those observed globally
- (2014) K. S. Ramirez et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- DNA extraction protocols cause differences in 16S rRNA amplicon sequencing efficiency but not in community profile composition or structure
- (2014) Benjamin E. R. Rubin et al. MicrobiologyOpen
- Unifying the analysis of high-throughput sequencing datasets: characterizing RNA-seq, 16S rRNA gene sequencing and selective growth experiments by compositional data analysis
- (2014) Andrew D Fernandes et al. Microbiome
- A Logistic Normal Multinomial Regression Model for Microbiome Compositional Data Analysis
- (2013) Fan Xia et al. BIOMETRICS
- Differential abundance analysis for microbial marker-gene surveys
- (2013) Joseph N Paulson et al. NATURE METHODS
- Evaluation of Methods for the Extraction and Purification of DNA from the Human Microbiome
- (2012) Sanqing Yuan et al. PLoS One
- Inferring Correlation Networks from Genomic Survey Data
- (2012) Jonathan Friedman et al. PLoS Computational Biology
- The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome
- (2012) Daniel McDonald et al. GigaScience
- Telmatobacter bradus gen. nov., sp. nov., a cellulolytic facultative anaerobe from subdivision 1 of the Acidobacteria, and emended description of Acidobacterium capsulatum Kishimoto et al. 1991
- (2011) T. A. Pankratov et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils
- (2009) N. L. Ward et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Database indexing for production MegaBLAST searches
- (2008) Aleksandr Morgulis et al. BIOINFORMATICS
- Steroidobacter denitrificans gen. nov., sp. nov., a steroidal hormone-degrading gammaproteobacterium
- (2008) M. Fahrbach et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreDiscover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversation