Metabopolis: scalable network layout for biological pathway diagrams in urban map style
出版年份 2019 全文链接
标题
Metabopolis: scalable network layout for biological pathway diagrams in urban map style
作者
关键词
Biological pathways, Graph drawing, Map metaphor, Orthogonal layout, Floor planning, Edge routing
出版物
BMC BIOINFORMATICS
Volume 20, Issue 1, Pages -
出版商
Springer Nature
发表日期
2019-04-16
DOI
10.1186/s12859-019-2779-4
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Efficient methods and readily customizable libraries for managing complexity of large networks
- (2018) Ugur Dogrusoz et al. PLoS One
- Glucose-regulated phosphorylation of TET2 by AMPK reveals a pathway linking diabetes to cancer
- (2018) Di Wu et al. NATURE
- BRENDA in 2019: a European ELIXIR core data resource
- (2018) Lisa Jeske et al. NUCLEIC ACIDS RESEARCH
- High-Quality Ultra-Compact Grid Layout of Grouped Networks
- (2016) Vahan Yoghourdjian et al. IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS
- HOLA: Human-like Orthogonal Network Layout
- (2016) Steve Kieffer et al. IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS
- BRENDA in 2017: new perspectives and new tools in BRENDA
- (2016) Sandra Placzek et al. NUCLEIC ACIDS RESEARCH
- Visual analysis of biological data-knowledge networks
- (2015) Corinna Vehlow et al. BMC BIOINFORMATICS
- WikiPathways: capturing the full diversity of pathway knowledge
- (2015) Martina Kutmon et al. NUCLEIC ACIDS RESEARCH
- Constrained floorplans in 2D and 3D
- (2015) Yi-Jun Chang et al. THEORETICAL COMPUTER SCIENCE
- SBGNViz: A Tool for Visualization and Complexity Management of SBGN Process Description Maps
- (2015) Mecit Sari et al. PLoS One
- MetDraw: automated visualization of genome-scale metabolic network reconstructions and high-throughput data
- (2014) Paul A. Jensen et al. BIOINFORMATICS
- Game level layout from design specification
- (2014) Chongyang Ma et al. COMPUTER GRAPHICS FORUM
- Group-in-a-Box Meta-Layouts for Topological Clusters and Attribute-Based Groups: Space-Efficient Visualizations of Network Communities and Their Ties
- (2014) S. Chaturvedi et al. COMPUTER GRAPHICS FORUM
- A community-driven global reconstruction of human metabolism
- (2013) Ines Thiele et al. NATURE BIOTECHNOLOGY
- Memorability of Visual Features in Network Diagrams
- (2012) Kim Marriott et al. IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS
- WikiPathways: building research communities on biological pathways
- (2011) T. Kelder et al. NUCLEIC ACIDS RESEARCH
- Computer-generated residential building layouts
- (2010) Paul Merrell et al. ACM TRANSACTIONS ON GRAPHICS
- Learning in repeated visual search
- (2010) M. C. Hout et al. Attention Perception & Psychophysics
- Editing, validating and translating of SBGN maps
- (2010) T. Czauderna et al. BIOINFORMATICS
- Visualizing Graphs and Clusters as Maps
- (2010) Emden R Gansner et al. IEEE COMPUTER GRAPHICS AND APPLICATIONS
- Browsing Large Image Datasets through Voronoi Diagrams
- (2010) P Brivio et al. IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS
- Drawing and Labeling High-Quality Metro Maps by Mixed-Integer Programming
- (2010) M Nollenburg et al. IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS
- Visualization of omics data for systems biology
- (2010) Nils Gehlenborg et al. NATURE METHODS
- The Systems Biology Graphical Notation
- (2009) Nicolas Le Novère et al. NATURE BIOTECHNOLOGY
- A layout algorithm for undirected compound graphs
- (2008) Ugur Dogrusoz et al. INFORMATION SCIENCES
- A survey of visualization tools for biological network analysis
- (2008) Georgios A Pavlopoulos et al. BioData Mining
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