期刊
BIOINFORMATICS
卷 26, 期 18, 页码 2340-2341出版社
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btq407
关键词
-
类别
资金
- German Ministry of Education and Research (BMBF) [0315430G]
- Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Germany
Motivation: The recently proposed Systems Biology Graphical Notation (SBGN) provides a standard for the visual representation of biochemical and cellular processes. It aims to support more efficient and accurate communication of biological knowledge between different research communities in the life sciences. However, to increase the use of SBGN, tools for editing, validating and translating SBGN maps are desirable. Results: We present SBGN-ED, a tool which allows the creation of all three types of SBGN maps from scratch or the editing of existing maps, the validation of these maps for syntactical and semantical correctness, the translation of networks from the KEGG and MetaCrop databases into SBGN and the export of SBGN maps into several file and image formats. Availability: SBGN-ED is freely available from http://vanted.ipkgatersleben.de/addons/sbgn-ed. The web site contains also tutorials and example files. Contact: schreibe@ipk-gatersleben.
作者
我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。
推荐
暂无数据