Genome-wide association analysis identifies a natural variation in basic helix-loop-helix transcription factor regulating ascorbate biosynthesis via D-mannose/L-galactose pathway in tomato

Rewiring of the Fruit Metabolome in Tomato Breeding

(2018) Guangtao Zhu et al.   CELL

Identification of major loci and genomic regions controlling acid and volatile content in tomato fruit: implications for flavor improvement

(2017) Guillaume Bauchet et al.   NEW PHYTOLOGIST

An InDel in the Promoter of Al-ACTIVATED MALATE TRANSPORTER9 Selected during Tomato Domestication Determines Fruit Malate Contents and Aluminum Tolerance

(2017) Jie Ye et al.   PLANT CELL

A chemical genetic roadmap to improved tomato flavor

(2017) Denise Tieman et al.   SCIENCE

Natural variation in CTB4a enhances rice adaptation to cold habitats

(2017) Zhanying Zhang et al.   Nature Communications

The regulation of ascorbate biosynthesis

(2016) Sean Bulley et al.   CURRENT OPINION IN PLANT BIOLOGY

Genome-wide identification and characterization of the bHLH gene family in tomato

(2015) Hua Sun et al.   BMC GENOMICS

Metabolite-based genome-wide association studies in plants

(2015) Jie Luo   CURRENT OPINION IN PLANT BIOLOGY

Metabolomic profiling in tomato reveals diel compositional changes in fruit affected by source–sink relationships

(2015) Camille Bénard et al.   JOURNAL OF EXPERIMENTAL BOTANY

The Potato ERF Transcription Factor StERF3 Negatively Regulates Resistance to Phytophthora infestans and Salt Tolerance in Potato

(2015) Zhendong Tian et al.   PLANT AND CELL PHYSIOLOGY

Genetic Determinants of the Network of Primary Metabolism and Their Relationships to Plant Performance in a Maize Recombinant Inbred Line Population

(2015) Weiwei Wen et al.   PLANT CELL

The tomato HD-Zip I transcription factor SlHZ24 modulates ascorbate accumulation through positive regulation of thed-mannose/l-galactose pathway

(2015) Tixu Hu et al.   PLANT JOURNAL

Genome-wide association analyses provide genetic and biochemical insights into natural variation in rice metabolism

(2014) Wei Chen et al.   NATURE GENETICS

The genome of the stress-tolerant wild tomato species Solanum pennellii

(2014) Anthony Bolger et al.   NATURE GENETICS

Genomic analyses provide insights into the history of tomato breeding

(2014) Tao Lin et al.   NATURE GENETICS

The Sugar Transporter Inventory of Tomato: Genome-Wide Identification and Expression Analysis

(2014) Stefan Reuscher et al.   PLANT AND CELL PHYSIOLOGY

Modeling Sugar Metabolism in Tomato Fruit

(2014) J. Mach   PLANT CELL

Model-Assisted Analysis of Sugar Metabolism throughout Tomato Fruit Development Reveals Enzyme and Carrier Properties in Relation to Vacuole Expansion

(2014) B. P. Beauvoit et al.   PLANT CELL

Genome-Wide Association in Tomato Reveals 44 Candidate Loci for Fruit Metabolic Traits

(2014) C. Sauvage et al.   PLANT PHYSIOLOGY

Metabolome-based genome-wide association study of maize kernel leads to novel biochemical insights

(2014) Weiwei Wen et al.   Nature Communications

A STAY-GREEN protein SlSGR1 regulates lycopene and β-carotene accumulation by interacting directly with SlPSY1 during ripening processes in tomato

(2013) Zhidan Luo et al.   NEW PHYTOLOGIST

Genetic and genome-wide transcriptomic analyses identify co-regulation of oxidative response and hormone transcript abundance with vitamin C content in tomato fruit

(2012) Viviana Lima-Silva et al.   BMC GENOMICS

The tomato genome sequence provides insights into fleshy fruit evolution

(2012)   NATURE

Vitamin Deficiencies in Humans: Can Plant Science Help?

(2012) T. B. Fitzpatrick et al.   PLANT CELL

Differential Modulation of Photosynthesis, Signaling, and Transcriptional Regulation between Tolerant and Sensitive Tomato Genotypes under Cold Stress

(2012) Hui Liu et al.   PLoS One

Molecular Evolution of Slow and Quick Anion Channels (SLACs and QUACs/ALMTs)

(2012) Ingo Dreyer et al.   Frontiers in Plant Science

Genetics and Control of Tomato Fruit Ripening and Quality Attributes

(2011) Harry J. Klee et al.   Annual Review of Genetics

Evaluating the effective numbers of independent tests and significant p-value thresholds in commercial genotyping arrays and public imputation reference datasets

(2011) Miao-Xin Li et al.   HUMAN GENETICS

Malate Plays a Crucial Role in Starch Metabolism, Ripening, and Soluble Solid Content of Tomato Fruit and Affects Postharvest Softening

(2011) Danilo C. Centeno et al.   PLANT CELL

How Can Research on Plants Contribute to Promoting Human Health?

(2011) Cathie Martin et al.   PLANT CELL

Population differentiation as a test for selective sweeps

(2010) H. Chen et al.   GENOME RESEARCH

Consumer Preferences for Fresh Tomato at the European Scale: A Common Segmentation on Taste and Firmness

(2010) Mathilde Causse et al.   JOURNAL OF FOOD SCIENCE

Breeding Technologies to Increase Crop Production in a Changing World

(2010) M. Tester et al.   SCIENCE

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Establishing an adjusted p-value threshold to control the family-wide type 1 error in genome wide association studies

(2009) Priya Duggal et al.   BMC GENOMICS

Next-generation genetics in plants

(2008) Magnus Nordborg et al.   NATURE

Enrichment of tomato fruit with health-promoting anthocyanins by expression of select transcription factors

(2008) Eugenio Butelli et al.   NATURE BIOTECHNOLOGY

Plant breeders go back to nature

(2008) Dani Zamir   NATURE GENETICS

Metabolomics-assisted breeding: a viable option for crop improvement?

(2008) Alisdair R. Fernie et al.   TRENDS IN GENETICS

Analysis of GDP-D-Mannose Pyrophosphorylase Gene Promoter from Acerola (Malpighia glabra) and Increase in Ascorbate Content of Transgenic Tobacco Expressing the Acerola Gene

(2007) A. A. Badejo et al.   PLANT AND CELL PHYSIOLOGY