Comparative Genomics of Cyanobacterial Symbionts Reveals Distinct, Specialized Metabolism in Tropical Dysideidae Sponges
出版年份 2019 全文链接
标题
Comparative Genomics of Cyanobacterial Symbionts Reveals Distinct, Specialized Metabolism in Tropical Dysideidae Sponges
作者
关键词
-
出版物
mBio
Volume 10, Issue 3, Pages -
出版商
American Society for Microbiology
发表日期
2019-05-13
DOI
10.1128/mbio.00821-19
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- MUMmer4: A fast and versatile genome alignment system
- (2018) Guillaume Marçais et al. PLoS Computational Biology
- Metagenomic binning of a marine sponge microbiome reveals unity in defense but metabolic specialization
- (2017) Beate M Slaby et al. ISME Journal
- Uncultivated microbes in need of their own taxonomy
- (2017) Konstantinos T Konstantinidis et al. ISME Journal
- UFBoot2: Improving the Ultrafast Bootstrap Approximation
- (2017) Diep Thi Hoang et al. MOLECULAR BIOLOGY AND EVOLUTION
- Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
- (2017) Robert M Bowers et al. NATURE BIOTECHNOLOGY
- Metagenomic discovery of polybrominated diphenyl ether biosynthesis by marine sponges
- (2017) Vinayak Agarwal et al. Nature Chemical Biology
- ModelFinder: fast model selection for accurate phylogenetic estimates
- (2017) Subha Kalyaanamoorthy et al. NATURE METHODS
- antiSMASH 4.0—improvements in chemistry prediction and gene cluster boundary identification
- (2017) Kai Blin et al. NUCLEIC ACIDS RESEARCH
- Comparative genomics uncovers the prolific and distinctive metabolic potential of the cyanobacterial genusMoorea
- (2017) Tiago Leao et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Insights into the lifestyle of uncultured bacterial natural product factories associated with marine sponges
- (2017) Gerald Lackner et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Comparative Metagenomics of the Polymicrobial Black Band Disease of Corals
- (2017) Julie L. Meyer et al. Frontiers in Microbiology
- New marine natural products from sponges (Porifera) of the order Dictyoceratida (2001 to 2012); a promising source for drug discovery, exploration and future prospects
- (2016) Mohammad F. Mehbub et al. BIOTECHNOLOGY ADVANCES
- A novel uncultured heterotrophic bacterial associate of the cyanobacterium Moorea producens JHB
- (2016) Susie L. Cummings et al. BMC MICROBIOLOGY
- Natural Products as Sources of New Drugs from 1981 to 2014
- (2016) David J. Newman et al. JOURNAL OF NATURAL PRODUCTS
- Next Generation Sequencing of Actinobacteria for the Discovery of Novel Natural Products
- (2016) Juan Gomez-Escribano et al. Marine Drugs
- Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking
- (2016) Mingxun Wang et al. NATURE BIOTECHNOLOGY
- Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees
- (2016) Ivica Letunic et al. NUCLEIC ACIDS RESEARCH
- Unique attributes of cyanobacterial metabolism revealed by improved genome-scale metabolic modeling and essential gene analysis
- (2016) Jared T. Broddrick et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- hybridSPAdes: an algorithm for hybrid assembly of short and long reads
- (2015) Dmitry Antipov et al. BIOINFORMATICS
- CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
- (2015) Donovan H. Parks et al. GENOME RESEARCH
- The re-emergence of natural products for drug discovery in the genomics era
- (2015) Alan L. Harvey et al. NATURE REVIEWS DRUG DISCOVERY
- KEGG as a reference resource for gene and protein annotation
- (2015) Minoru Kanehisa et al. NUCLEIC ACIDS RESEARCH
- antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters
- (2015) Tilmann Weber et al. NUCLEIC ACIDS RESEARCH
- The essential gene set of a photosynthetic organism
- (2015) Benjamin E. Rubin et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Lifestyle Evolution in Cyanobacterial Symbionts of Sponges
- (2015) Ilia Burgsdorf et al. mBio
- Anvi’o: an advanced analysis and visualization platform for ‘omics data
- (2015) A. Murat Eren et al. PeerJ
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- SSPACE-LongRead: scaffolding bacterial draft genomes using long read sequence information
- (2014) Marten Boetzer et al. BMC BIOINFORMATICS
- Phylum-wide comparative genomics unravel the diversity of secondary metabolism in Cyanobacteria
- (2014) Alexandra Calteau et al. BMC GENOMICS
- IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
- (2014) Lam-Tung Nguyen et al. MOLECULAR BIOLOGY AND EVOLUTION
- An environmental bacterial taxon with a large and distinct metabolic repertoire
- (2014) Micheal C. Wilson et al. NATURE
- Biosynthesis of polybrominated aromatic organic compounds by marine bacteria
- (2014) Vinayak Agarwal et al. Nature Chemical Biology
- Symbiotic Adaptation Drives Genome Streamlining of the Cyanobacterial Sponge Symbiont "Candidatus Synechococcus spongiarum"
- (2014) Z.-M. Gao et al. mBio
- Detecting Sequence Homology at the Gene Cluster Level with MultiGeneBlast
- (2013) Marnix H. Medema et al. MOLECULAR BIOLOGY AND EVOLUTION
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- Pfam: the protein families database
- (2013) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- Assembly-Driven Community Genomics of a Hypersaline Microbial Ecosystem
- (2013) Sheila Podell et al. PLoS One
- IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
- (2012) Y. Peng et al. BIOINFORMATICS
- GapFiller: a de novo assembly approach to fill the gap within paired reads
- (2012) Francesca Nadalin et al. BMC BIOINFORMATICS
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Bacterial symbionts and natural products
- (2011) Jason M. Crawford et al. CHEMICAL COMMUNICATIONS
- IMG: the integrated microbial genomes database and comparative analysis system
- (2011) V. M. Markowitz et al. NUCLEIC ACIDS RESEARCH
- Complex microbiome underlying secondary and primary metabolism in the tunicate-Prochloron symbiosis
- (2011) M. S. Donia et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Genetic and Molecular Basis for Sunscreen Biosynthesis in Cyanobacteria
- (2010) E. P. Balskus et al. SCIENCE
- trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
- (2009) S. Capella-Gutierrez et al. BIOINFORMATICS
- Genomic islands link secondary metabolism to functional adaptation in marine Actinobacteria
- (2009) Kevin Penn et al. ISME Journal
- NMR Strategy for Unraveling Structures of Bioactive Sponge-Derived Oxy-polyhalogenated Diphenyl Ethers⊥
- (2009) Laurent Calcul et al. JOURNAL OF NATURAL PRODUCTS
- Multiple, Novel Biologically Active Endophytic Actinomycetes Isolated from Upper Amazonian Rainforests
- (2009) Carol A. Bascom-Slack et al. MICROBIAL ECOLOGY
- Mycosporine-Like Amino Acids and Marine Toxins - The Common and the Different
- (2008) Manfred Klisch Marine Drugs
- Learning how to live together: genomic insights into prokaryote–animal symbioses
- (2008) Andrés Moya et al. NATURE REVIEWS GENETICS
- A simple, fast, and accurate method of phylogenomic inference
- (2008) Martin Wu et al. GENOME BIOLOGY
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search