Genome-wide DNA methylation analysis in multiple tissues in primary Sjögren's syndrome reveals regulatory effects at interferon-induced genes

Overlap between differentially methylated DNA regions in blood B lymphocytes and genetic at-risk loci in primary Sjögren's syndrome

(2015) Corinne Miceli-Richard et al.   ANNALS OF THE RHEUMATIC DISEASES

IFN-  production by plasmacytoid dendritic cell associations with polymorphisms in gene loci related to autoimmune and inflammatory diseases

(2015) O. Berggren et al.   HUMAN MOLECULAR GENETICS

Type I and II interferon signatures in Sjogren's syndrome pathogenesis: Contributions in distinct clinical phenotypes and Sjogren's related lymphomagenesis

(2015) Adrianos Nezos et al.   JOURNAL OF AUTOIMMUNITY

Epigenome profiling reveals significant DNA demethylation of interferon signature genes in lupus neutrophils

(2015) Patrick Coit et al.   JOURNAL OF AUTOIMMUNITY

The alternative role of DNA methylation in splicing regulation

(2015) Galit Lev Maor et al.   TRENDS IN GENETICS

Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays

(2014) Martin J. Aryee et al.   BIOINFORMATICS

DNA methylation and mRNA and microRNA expression of SLE CD4+ T cells correlate with disease phenotype

(2014) Ming Zhao et al.   JOURNAL OF AUTOIMMUNITY

The contribution of epigenetics in Sjögren’s Syndrome

(2014) Orsia D. Konsta et al.   Frontiers in Genetics

MxA as a clinically applicable biomarker for identifying systemic interferon type I in primary Sjögren's syndrome

(2013) Naomi I Maria et al.   ANNALS OF THE RHEUMATIC DISEASES

Genome-wide DNA methylation study suggests epigenetic accessibility and transcriptional poising of interferon-regulated genes in naïve CD4+ T cells from lupus patients

(2013) Patrick Coit et al.   JOURNAL OF AUTOIMMUNITY

BAL1/ARTD9 represses the anti-proliferative and pro-apoptotic IFN -STAT1-IRF1-p53 axis in diffuse large B-cell lymphoma

(2013) R. Camicia et al.   JOURNAL OF CELL SCIENCE

miR-223: infection, inflammation and cancer

(2013) M. Haneklaus et al.   JOURNAL OF INTERNAL MEDICINE

Methylation differences at the HLA-DRB1 locus in CD4+ T-Cells are associated with multiple sclerosis

(2013) MC Graves et al.   Multiple Sclerosis Journal

A genome-wide association study in Han Chinese identifies a susceptibility locus for primary Sjögren's syndrome at 7q11.23

(2013) Yongzhe Li et al.   NATURE GENETICS

Variants at multiple loci implicated in both innate and adaptive immune responses are associated with Sjögren's syndrome

(2013) Christopher J Lessard et al.   NATURE GENETICS

Advances in understanding the pathogenesis of primary Sjögren's syndrome

(2013) Gaëtane Nocturne et al.   Nature Reviews Rheumatology

Association of Genes in the NF-κB Pathway with Antibody-Positive Primary Sjögren's Syndrome

(2013) Gunnel Nordmark et al.   SCANDINAVIAN JOURNAL OF IMMUNOLOGY

Lymphoma development in patients with autoimmune and inflammatory disorders – What are the driving forces?

(2013) Eva Baecklund et al.   SEMINARS IN CANCER BIOLOGY

Genome-Wide DNA Methylation Analysis of Systemic Lupus Erythematosus Reveals Persistent Hypomethylation of Interferon Genes and Compositional Changes to CD4+ T-cell Populations

(2013) Devin M. Absher et al.   PLoS Genetics

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

Prevalence of interferon type I signature in CD14 monocytes of patients with Sjögren's syndrome and association with disease activity and BAFF gene expression

(2012) Zana Brkic et al.   ANNALS OF THE RHEUMATIC DISEASES

RNA-SeQC: RNA-seq metrics for quality control and process optimization

(2012) David S. DeLuca et al.   BIOINFORMATICS

DNA methylation arrays as surrogate measures of cell mixture distribution

(2012) Eugene Houseman et al.   BMC BIOINFORMATICS

Primary Sjogren’s Syndrome and the Type I Interferon System

(2012) Gunnel Nordmark et al.   CURRENT PHARMACEUTICAL BIOTECHNOLOGY

Genetics of Sjögren’s syndrome in the genome-wide association era

(2012) John A. Ice et al.   JOURNAL OF AUTOIMMUNITY

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Differential DNA Methylation in Purified Human Blood Cells: Implications for Cell Lineage and Studies on Disease Susceptibility

(2012) Lovisa E. Reinius et al.   PLoS One

SWAN: Subset-quantile Within Array Normalization for Illumina Infinium HumanMethylation450 BeadChips

(2012) Jovana Maksimovic et al.   GENOME BIOLOGY

MicroRNA expression profiles as biomarkers of minor salivary gland inflammation and dysfunction in Sjögren's syndrome

(2011) Ilias Alevizos et al.   ARTHRITIS AND RHEUMATISM

High density DNA methylation array with single CpG site resolution

(2011) Marina Bibikova et al.   GENOMICS

The type I interferon system in the development of lupus

(2011) Lars Rönnblom et al.   SEMINARS IN IMMUNOLOGY

Association of EBF1, FAM167A(C8orf13)-BLK and TNFSF4 gene variants with primary Sjögren's syndrome

(2010) G Nordmark et al.   GENES AND IMMUNITY

Human MxA Protein: An Interferon-Induced Dynamin-Like GTPase with Broad Antiviral Activity

(2010) Otto Haller et al.   JOURNAL OF INTERFERON AND CYTOKINE RESEARCH

The NIH Roadmap Epigenomics Mapping Consortium

(2010) Bradley E Bernstein et al.   NATURE BIOTECHNOLOGY

Peripheral blood gene expression profiling in Sjögren's syndrome

(2009) E S Emamian et al.   GENES AND IMMUNITY