Omics-based analyses revealed metabolic responses of Clostridium acetobutylicum to lignocellulose-derived inhibitors furfural, formic acid and phenol stress for butanol fermentation

Identification of a metabolomic signature associated with feed efficiency in beef cattle

(2019) Francisco José Novais et al.   BMC GENOMICS

Identification and metabolomic analysis of chemical elicitors for tacrolimus accumulation in Streptomyces tsukubaensis

(2018) Cheng Wang et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Multimodal analysis of pretreated biomass species highlights generic markers of lignocellulose recalcitrance

(2018) Mickaël Herbaut et al.   Biotechnology for Biofuels

Pretreatment of lignocellulose: Formation of inhibitory by-products and strategies for minimizing their effects

(2016) Leif J. Jönsson et al.   BIORESOURCE TECHNOLOGY

Integrated intracellular metabolic profiling and pathway analysis approaches reveal complex metabolic regulation by Clostridium acetobutylicum

(2016) Huanhuan Liu et al.   Microbial Cell Factories

A quantitative metabolomics study of high sodium response in Clostridium acetobutylicum ATCC 824 acetone-butanol-ethanol (ABE) fermentation

(2016) Xinhe Zhao et al.   Scientific Reports

ATP Synthase

(2015) Wolfgang Junge et al.   Annual Review of Biochemistry

Proteomic and metabolomic analysis of the carotenogenic yeast Xanthophyllomyces dendrorhous using different carbon sources

(2015) Pilar Martinez-Moya et al.   BMC GENOMICS

Comparative metabolic profiling reveals the key role of amino acids metabolism in the rapamycin overproduction by Streptomyces hygroscopicus

(2015) Baohua Wang et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Comparative proteomics reveal the impact of OmcA/MtrC deletion on Shewanella oneidensis MR-1 in response to hexavalent chromium exposure

(2014) Chao Wang et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Metabolomic and network analysis of astaxanthin-producing Haematococcus pluvialis under various stress conditions

(2014) Yingxue Su et al.   BIORESOURCE TECHNOLOGY

Enhanced FK506 production inStreptomyces tsukubaensisby rational feeding strategies based on comparative metabolic profiling analysis

(2013) Menglei Xia et al.   BIOTECHNOLOGY AND BIOENGINEERING

Bioconversion of lignocellulose: inhibitors and detoxification

(2013) Leif J Jönsson et al.   Biotechnology for Biofuels

Coexpressing Escherichia coli Cyclopropane Synthase with Sterculia foetida Lysophosphatidic Acid Acyltransferase Enhances Cyclopropane Fatty Acid Accumulation

(2013) X.-H. Yu et al.   PLANT PHYSIOLOGY

Metabolite profiling of CHO cells with different growth characteristics

(2012) Stefanie Dietmair et al.   BIOTECHNOLOGY AND BIOENGINEERING

Effects of acetic and formic acid on ABE production by Clostridium acetobutylicum and Clostridium beijerinckii

(2012) Dae Haeng Cho et al.   BIOTECHNOLOGY AND BIOPROCESS ENGINEERING

A transcriptional study of acidogenic chemostat cells of Clostridium acetobutylicum—Solvent stress caused by a transient n-butanol pulse

(2012) Holger Janssen et al.   JOURNAL OF BIOTECHNOLOGY

Formic Acid Triggers the “Acid Crash” of Acetone-Butanol-Ethanol Fermentation byClostridium acetobutylicum

(2011) Shaohua Wang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Metabolome Remodeling during the Acidogenic-Solventogenic Transition in Clostridium acetobutylicum

(2011) Daniel Amador-Noguez et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Butanol production from renewable biomass: Rediscovery of metabolic pathways and metabolic engineering

(2011) Yu-Sin Jang et al.   Biotechnology Journal

Bioconversion of lignocellulose-derived sugars to ethanol by engineeredSaccharomyces cerevisiae

(2011) Anjali Madhavan et al.   CRITICAL REVIEWS IN BIOTECHNOLOGY

Biotransformation of furfural and 5-hydroxymethyl furfural (HMF) by Clostridium acetobutylicum ATCC 824 during butanol fermentation

(2011) Yan Zhang et al.   New Biotechnology

Comparative shotgun proteomic analysis of Clostridium acetobutylicum from butanol fermentation using glucose and xylose

(2011) Kumaran Sivagnanam et al.   Proteome Science

Progress in the production and application of n-butanol as a biofuel

(2011) Chao Jin et al.   RENEWABLE & SUSTAINABLE ENERGY REVIEWS

Resolving the TCA cycle and pentose-phosphate pathway of Clostridium acetobutylicum ATCC 824: Isotopomer analysis, in vitro activities and expression analysis

(2010) Scott B. Crown et al.   Biotechnology Journal

MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data

(2010) Tomáš Pluskal et al.   BMC BIOINFORMATICS

Proteome Reference Map and Comparative Proteomic Analysis between a Wild TypeClostridium acetobutylicumDSM 1731 and its Mutant with Enhanced Butanol Tolerance and Butanol Yield

(2010) Shaoming Mao et al.   JOURNAL OF PROTEOME RESEARCH

Identification and characterization of the furfural and 5-(hydroxymethyl)furfural degradation pathways of Cupriavidus basilensis HMF14

(2010) F. Koopman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Recent progress on industrial fermentative production of acetone–butanol–ethanol by Clostridium acetobutylicum in China

(2009) Ye Ni et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Detoxification of model phenolic compounds in lignocellulosic hydrolysates with peroxidase for butanol production from Clostridium beijerinckii

(2009) Dae Haeng Cho et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Metabolic pathways of clostridia for producing butanol

(2009) R. Gheshlaghi et al.   BIOTECHNOLOGY ADVANCES

New improvements for lignocellulosic ethanol

(2009) Antoine Margeot et al.   CURRENT OPINION IN BIOTECHNOLOGY

Investigation of inter-individual variability of the one-carbon folate pathway: a bioinformatic and genetic review

(2009) D F Carr et al.   PHARMACOGENOMICS JOURNAL

A review on research progress of transketolase

(2009) Jing Zhao et al.   Neuroscience Bulletin

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS