Changes in Trophic Groups of Protists With Conversion of Rainforest Into Rubber and Oil Palm Plantations

New Phylogenomic Analysis of the Enigmatic Phylum Telonemia Further Resolves the Eukaryote Tree of Life

(2019) Jürgen F H Strassert et al.   MOLECULAR BIOLOGY AND EVOLUTION

Methodological advances to study the diversity of soil protists and their functioning in soil food webs

(2018) Stefan Geisen et al.   APPLIED SOIL ECOLOGY

High-throughput environmental sequencing reveals high diversity of litter and moss associated protist communities along a gradient of drainage and tree productivity

(2018) Thierry J. Heger et al.   ENVIRONMENTAL MICROBIOLOGY

Micro-decomposer communities and decomposition processes in tropical lowlands as affected by land use and litter type

(2018) Valentyna Krashevska et al.   OECOLOGIA

Ribotypes of Polymyxa graminis in Wheat Samples Infected with Soilborne Wheat Viruses in China

(2018) Yu Xu et al.   PLANT DISEASE

Carbon costs and benefits of Indonesian rainforest conversion to plantations

(2018) Thomas Guillaume et al.   Nature Communications

Embracing the unknown: disentangling the complexities of the soil microbiome

(2017) Noah Fierer   NATURE REVIEWS MICROBIOLOGY

Trophic niches, diversity and community composition of invertebrate top predators (Chilopoda) as affected by conversion of tropical lowland rainforest in Sumatra (Indonesia)

(2017) Bernhard Klarner et al.   PLoS One

Distribution patterns of soil microbial eukaryotes suggests widespread algivory by phagotrophic protists as an alternative pathway for nutrient cycling

(2017) Christophe V.W. Seppey et al.   SOIL BIOLOGY & BIOCHEMISTRY

Parasites dominate hyperdiverse soil protist communities in Neotropical rainforests

(2017) Frédéric Mahé et al.   Nature Ecology & Evolution

Direct and cascading impacts of tropical land-use change on multi-trophic biodiversity

(2017) Andrew D. Barnes et al.   Nature Ecology & Evolution

A review of the ecosystem functions in oil palm plantations, using forests as a reference system

(2016) Claudia Dislich et al.   BIOLOGICAL REVIEWS

Thorough high-throughput sequencing analyses unravels huge diversities of soil parasitic protists

(2016) Stefan Geisen   ENVIRONMENTAL MICROBIOLOGY

Differences in soil micro-eukaryotic communities over soil pH gradients are strongly driven by parasites and saprotrophs

(2016) A. Ö. C. Dupont et al.   ENVIRONMENTAL MICROBIOLOGY

Protistan community analysis: key findings of a large-scale molecular sampling

(2016) Lars Grossmann et al.   ISME Journal

Ecological and socio-economic functions across tropical land use systems after rainforest conversion

(2016) Jochen Drescher et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Trophic complexity in aqueous systems: bacterial species richness and protistan predation regulate dissolved organic carbon and dissolved total nitrogen removal

(2016) Muhammad Saleem et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The soil food web revisited: Diverse and widespread mycophagous soil protists

(2016) Stefan Geisen et al.   SOIL BIOLOGY & BIOCHEMISTRY

Land-use choices follow profitability at the expense of ecological functions in Indonesian smallholder landscapes

(2016) Yann Clough et al.   Nature Communications

Functional diversity and stability of litter-invertebrate communities following land-use change in Sumatra, Indonesia

(2015) Steffen Mumme et al.   BIOLOGICAL CONSERVATION

Impact of tropical lowland rainforest conversion into rubber and oil palm plantations on soil microbial communities

(2015) Valentyna Krashevska et al.   BIOLOGY AND FERTILITY OF SOILS

Pack hunting by a common soil amoeba on nematodes

(2015) Stefan Geisen et al.   ENVIRONMENTAL MICROBIOLOGY

Quantifying above- and belowground biomass carbon loss with forest conversion in tropical lowlands of Sumatra (Indonesia)

(2015) Martyna M. Kotowska et al.   GLOBAL CHANGE BIOLOGY

Metatranscriptomic census of active protists in soils

(2015) Stefan Geisen et al.   ISME Journal

Soil microorganisms behave like macroscopic organisms: patterns in the global distribution of soil euglyphid testate amoebae

(2015) Enrique Lara et al.   JOURNAL OF BIOGEOGRAPHY

Degradation of Root Community Traits as Indicator for Transformation of Tropical Lowland Rain Forests into Oil Palm and Rubber Plantations

(2015) Josephine Sahner et al.   PLoS One

Expansion of the ‘Reticulosphere’: Diversity of Novel Branching and Network-forming Amoebae Helps to Define Variosea (Amoebozoa)

(2015) Cédric Berney et al.   PROTIST

Eukaryotic plankton diversity in the sunlit ocean

(2015) C. de Vargas et al.   SCIENCE

Impact of Lowland Rainforest Transformation on Diversity and Composition of Soil Prokaryotic Communities in Sumatra (Indonesia)

(2015) Dominik Schneider et al.   Frontiers in Microbiology

Value chain analysis for green productivity improvement in the natural rubber supply chain: a case study

(2014) Marimin et al.   JOURNAL OF CLEANER PRODUCTION

Belowground biodiversity and ecosystem functioning

(2014) Richard D. Bardgett et al.   NATURE

Ultrastructure of the Algivorous Amoeboflagellate Viridiraptor invadens (Glissomonadida, Cercozoa)

(2014) Sebastian Hess et al.   PROTIST

Consequences of tropical land use for multitrophic biodiversity and ecosystem functioning

(2014) Andrew D. Barnes et al.   Nature Communications

Primary forest cover loss in Indonesia over 2000–2012

(2014) Belinda Arunarwati Margono et al.   Nature Climate Change

Diversity of protists and bacteria determines predation performance and stability

(2013) Muhammad Saleem et al.   ISME Journal

Light Suppresses Sporulation and Epidemics of Peronospora belbahrii

(2013) Yigal Cohen et al.   PLoS One

Protozoa stimulate N uptake and growth of arbuscular mycorrhizal plants

(2013) Robert Koller et al.   SOIL BIOLOGY & BIOCHEMISTRY

Navjot's nightmare revisited: logging, agriculture, and biodiversity in Southeast Asia

(2013) David S. Wilcove et al.   TRENDS IN ECOLOGY & EVOLUTION

Global biogeography of highly diverse protistan communities in soil

(2012) Scott T Bates et al.   ISME Journal

Structure, fluctuation and magnitude of a natural grassland soil metagenome

(2012) Tom O Delmont et al.   ISME Journal

The Revised Classification of Eukaryotes

(2012) Sina M. Adl et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

The performance of single- and multi-proxy transfer functions (testate amoebae, bryophytes, vascular plants) for reconstructing mire surface wetness and pH

(2012) Edward A.D. Mitchell et al.   QUATERNARY RESEARCH

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

PEATLAND CONVERSION AND DEGRADATION PROCESSES IN INSULAR SOUTHEAST ASIA: A CASE STUDY IN JAMBI, INDONESIA

(2011) J. Miettinen et al.   LAND DEGRADATION & DEVELOPMENT

Remotely sensed evidence of tropical peatland conversion to oil palm

(2011) L. P. Koh et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Detection of Polymyxa graminis in a barley crop in Australia

(2010) J. P. Thompson et al.   AUSTRALASIAN PLANT PATHOLOGY

Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water

(2010) THORSTEN STOECK et al.   MOLECULAR ECOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Tropical forests were the primary sources of new agricultural land in the 1980s and 1990s

(2010) H. K. Gibbs et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Landscape-scale variation in the structure and biomass of the hill dipterocarp forest of Sumatra: Implications for carbon stock assessments

(2009) Yves Laumonier et al.   FOREST ECOLOGY AND MANAGEMENT

Soil amoebae rapidly change bacterial community composition in the rhizosphere of Arabidopsis thaliana

(2009) Katja Rosenberg et al.   ISME Journal

Simultaneous Inference in General Parametric Models

(2008) Torsten Hothorn et al.   BIOMETRICAL JOURNAL

Gregarina tropica n. sp. (Apicomplexa: Eugregarinorida: Gregarinicae: Gregarinidae) Parasitizing the Brown-Winged Earwig, Vostox brunneipennis (Dermaptera: Labiidae), in the Texas Big Thicket

(2008) Richard E. Clopton et al.   COMPARATIVE PARASITOLOGY

The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria

(2008) Graeme W. Nicol et al.   ENVIRONMENTAL MICROBIOLOGY

Widespread occurrence and genetic diversity of marine parasitoids belonging toSyndiniales(Alveolata)

(2008) L. Guillou et al.   ENVIRONMENTAL MICROBIOLOGY

The Microbial Engines That Drive Earth's Biogeochemical Cycles

(2008) P. G. Falkowski et al.   SCIENCE