How Rainforest Conversion to Agricultural Systems in Sumatra (Indonesia) Affects Active Soil Bacterial Communities
出版年份 2018 全文链接
标题
How Rainforest Conversion to Agricultural Systems in Sumatra (Indonesia) Affects Active Soil Bacterial Communities
作者
关键词
-
出版物
Frontiers in Microbiology
Volume 9, Issue -, Pages -
出版商
Frontiers Media SA
发表日期
2018-10-10
DOI
10.3389/fmicb.2018.02381
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Global analysis of agricultural soil denitrification in response to fertilizer nitrogen
- (2018) Jinyang Wang et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Comparison of two bioinformatics tools used to characterize the microbial diversity and predictive functional attributes of microbial mats from Lake Obersee, Antarctica
- (2017) Hyunmin Koo et al. JOURNAL OF MICROBIOLOGICAL METHODS
- Exploration of bacterial N2-fixation systems in association with soil-grown sugarcane, sweet potato, and paddy rice: a review and synthesis
- (2017) Tadakatsu Yoneyama et al. SOIL SCIENCE AND PLANT NUTRITION
- Bioinformatic Approaches Including Predictive Metagenomic Profiling Reveal Characteristics of Bacterial Response to Petroleum Hydrocarbon Contamination in Diverse Environments
- (2017) Arghya Mukherjee et al. Scientific Reports
- Fertilization Shapes Bacterial Community Structure by Alteration of Soil pH
- (2017) Yuting Zhang et al. Frontiers in Microbiology
- The impact of swidden decline on livelihoods and ecosystem services in Southeast Asia: A review of the evidence from 1990 to 2015
- (2016) Wolfram H. Dressler et al. AMBIO
- Liming in the sugarcane burnt system and the green harvest practice affect soil bacterial community in northeastern São Paulo, Brazil
- (2016) Silvana Pompeia Val-Moraes et al. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
- Residual effects of paper mill biosolids and liming materials on soil microbial biomass and community structure
- (2016) Dalel Abdi et al. CANADIAN JOURNAL OF SOIL SCIENCE
- The Role of cheA Genes in Swarming and Swimming Motility of Pseudomonas pseudoalcaligenes KF707
- (2016) Stefano Fedi et al. MICROBES AND ENVIRONMENTS
- Temporal Changes Rather than Long-Term Repeated Burning Predominately Control the Shift in the Abundance of Soil Denitrifying Community in an Australian Sclerophyll Forest
- (2016) Xian Liu et al. MICROBIAL ECOLOGY
- Rainforest Conversion to Rubber Plantation May Not Result in Lower Soil Diversity of Bacteria, Fungi, and Nematodes
- (2016) Dorsaf Kerfahi et al. MICROBIAL ECOLOGY
- The impact of tropical forest logging and oil palm agriculture on the soil microbiome
- (2016) Binu M. Tripathi et al. MOLECULAR ECOLOGY
- Total and active microbial communities and phoD as affected by phosphate depletion and pH in soil
- (2016) Sabine A. Ragot et al. PLANT AND SOIL
- The fate of fertilizer nitrogen in a high nitrate accumulated agricultural soil
- (2016) Zhi Quan et al. Scientific Reports
- Ecology of Nitrogen Fixing, Nitrifying, and Denitrifying Microorganisms in Tropical Forest Soils
- (2016) Silvia Pajares et al. Frontiers in Microbiology
- The Ecology of Acidobacteria: Moving beyond Genes and Genomes
- (2016) Anna M. Kielak et al. Frontiers in Microbiology
- Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests
- (2016) Kristin Kaiser et al. Scientific Reports
- Tax4Fun: predicting functional profiles from metagenomic 16S rRNA data: Fig. 1.
- (2015) Kathrin P. Aßhauer et al. BIOINFORMATICS
- Available nitrogen is the key factor influencing soil microbial functional gene diversity in tropical rainforest
- (2015) Jing Cong et al. BMC MICROBIOLOGY
- Land use, soil and litter chemistry drive bacterial community structures in samples of the rainforest and Cerrado (Brazilian Savannah) biomes in Southern Amazonia
- (2015) Daniel Renato Lammel et al. EUROPEAN JOURNAL OF SOIL BIOLOGY
- Quantifying above- and belowground biomass carbon loss with forest conversion in tropical lowlands of Sumatra (Indonesia)
- (2015) Martyna M. Kotowska et al. GLOBAL CHANGE BIOLOGY
- Promoting sustainable palm oil: viewed from a global networks and flows perspective
- (2015) Peter Oosterveer JOURNAL OF CLEANER PRODUCTION
- Assembly of Active Bacterial and Fungal Communities Along a Natural Environmental Gradient
- (2015) Rebecca C Mueller et al. MICROBIAL ECOLOGY
- Soil Nitrogen-Cycling Responses to Conversion of Lowland Forests to Oil Palm and Rubber Plantations in Sumatra, Indonesia
- (2015) Kara Allen et al. PLoS One
- Consistent responses of soil microbial communities to elevated nutrient inputs in grasslands across the globe
- (2015) Jonathan W. Leff et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Positioning of bacterial chemoreceptors
- (2015) Christopher W. Jones et al. TRENDS IN MICROBIOLOGY
- Structural conservation of chemotaxis machinery across Archaea and Bacteria
- (2015) Ariane Briegel et al. Environmental Microbiology Reports
- Different bulk and active bacterial communities in cryoconite from the margin and interior of the Greenland ice sheet
- (2015) Marek Stibal et al. Environmental Microbiology Reports
- pH-driven shifts in overall and transcriptionally active denitrifiers control gaseous product stoichiometry in growth experiments with extracted bacteria from soil
- (2015) Kristof Brenzinger et al. Frontiers in Microbiology
- The green impact: bacterioplankton response toward a phytoplankton spring bloom in the southern North Sea assessed by comparative metagenomic and metatranscriptomic approaches
- (2015) Bernd Wemheuer et al. Frontiers in Microbiology
- Impact of Lowland Rainforest Transformation on Diversity and Composition of Soil Prokaryotic Communities in Sumatra (Indonesia)
- (2015) Dominik Schneider et al. Frontiers in Microbiology
- Differential Response of Acidobacteria Subgroups to Forest-to-Pasture Conversion and Their Biogeographic Patterns in the Western Brazilian Amazon
- (2015) Acacio A. Navarrete et al. Frontiers in Microbiology
- Shotgun Metagenomic Sequencing Reveals Functional Genes and Microbiome Associated with Bovine Digital Dermatitis
- (2015) Martin Zinicola et al. PLoS One
- Effects of Fertilization and Sampling Time on Composition and Diversity of Entire and Active Bacterial Communities in German Grassland Soils
- (2015) Sarah Herzog et al. PLoS One
- Biofertilizers function as key player in sustainable agriculture by improving soil fertility, plant tolerance and crop productivity
- (2014) Deepak Bhardwaj et al. Microbial Cell Factories
- pH as a Driver for Ammonia-Oxidizing Archaea in Forest Soils
- (2014) Barbara Stempfhuber et al. MICROBIAL ECOLOGY
- Soil pH Determines Microbial Diversity and Composition in the Park Grass Experiment
- (2014) Kateryna Zhalnina et al. MICROBIAL ECOLOGY
- Drivers shaping the diversity and biogeography of total and active bacterial communities in the South China Sea
- (2014) Yao Zhang et al. MOLECULAR ECOLOGY
- Key components of the eight classes of type IV secretion systems involved in bacterial conjugation or protein secretion
- (2014) Julien Guglielmini et al. NUCLEIC ACIDS RESEARCH
- Relationships between ammonia oxidizers and N2O and CH4fluxes in agricultural fields with different soil types
- (2014) Hiroko Akiyama et al. SOIL SCIENCE AND PLANT NUTRITION
- Consequences of tropical land use for multitrophic biodiversity and ecosystem functioning
- (2014) Andrew D. Barnes et al. Nature Communications
- Impact of Logging and Forest Conversion to Oil Palm Plantations on Soil Bacterial Communities in Borneo
- (2013) Larisa Lee-Cruz et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Ecoenzymatic stoichiometry of microbial nutrient acquisition in tropical soils
- (2013) Bonnie Grace Waring et al. BIOGEOCHEMISTRY
- Determinants ofAcidobacteriaactivity inferred from the relative abundances of 16S rRNA transcripts in German grassland and forest soils
- (2013) Bärbel U. Foesel et al. ENVIRONMENTAL MICROBIOLOGY
- Ammonium induces differential expression of methane and nitrogen metabolism-related genes inMethylocystissp. strain SC2
- (2013) Bomba Dam et al. ENVIRONMENTAL MICROBIOLOGY
- Impact of a phytoplankton bloom on the diversity of the active bacterial community in the southern North Sea as revealed by metatranscriptomic approaches
- (2013) Bernd Wemheuer et al. FEMS MICROBIOLOGY ECOLOGY
- Review on iron availability in soil: interaction of Fe minerals, plants, and microbes
- (2013) Claudio Colombo et al. JOURNAL OF SOILS AND SEDIMENTS
- Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
- (2013) Morgan G I Langille et al. NATURE BIOTECHNOLOGY
- The Variability of the 16S rRNA Gene in Bacterial Genomes and Its Consequences for Bacterial Community Analyses
- (2013) Tomáš Větrovský et al. PLoS One
- Analysis of Nitrification Efficiency and Microbial Community in a Membrane Bioreactor Fed with Low COD/N-Ratio Wastewater
- (2013) Jinxing Ma et al. PLoS One
- Navjot's nightmare revisited: logging, agriculture, and biodiversity in Southeast Asia
- (2013) David S. Wilcove et al. TRENDS IN ECOLOGY & EVOLUTION
- High abundance of ammonia-oxidizing archaea in acidified subtropical forest soils in southern China after long-term N deposition
- (2012) Kazuo Isobe et al. FEMS MICROBIOLOGY ECOLOGY
- Pre-exposure to drought increases the resistance of tropical forest soil bacterial communities to extended drought
- (2012) Nicholas J Bouskill et al. ISME Journal
- Structure, fluctuation and magnitude of a natural grassland soil metagenome
- (2012) Tom O Delmont et al. ISME Journal
- Tropical Soil Bacterial Communities in Malaysia: pH Dominates in the Equatorial Tropics Too
- (2012) Binu M. Tripathi et al. MICROBIAL ECOLOGY
- Fast, accurate error-correction of amplicon pyrosequences using Acacia
- (2012) Lauren Bragg et al. NATURE METHODS
- Structural biology of type VI secretion systems
- (2012) E. Cascales et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- RNA-Based Assessment of Diversity and Composition of Active Archaeal Communities in the German Bight
- (2012) Bernd Wemheuer et al. ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL
- UCHIME improves sensitivity and speed of chimera detection
- (2011) Robert C. Edgar et al. BIOINFORMATICS
- The Effects of Soil Bacterial Community Structure on Decomposition in a Tropical Rain Forest
- (2011) Jonathan W. Leff et al. ECOSYSTEMS
- Endosymbiotic bacteria associated with nematodes, ticks and amoebae
- (2011) Mark Taylor et al. FEMS IMMUNOLOGY AND MEDICAL MICROBIOLOGY
- Remotely sensed evidence of tropical peatland conversion to oil palm
- (2011) L. P. Koh et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Soil beneficial bacteria and their role in plant growth promotion: a review
- (2010) Rifat Hayat et al. ANNALS OF MICROBIOLOGY
- Influence of Soil Characteristics on the Diversity of Bacteria in the Southern Brazilian Atlantic Forest
- (2010) H. Faoro et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Accessing the Soil Metagenome for Studies of Microbial Diversity
- (2010) Tom O. Delmont et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- UniFrac: an effective distance metric for microbial community comparison
- (2010) Catherine Lozupone et al. ISME Journal
- Soil bacterial and fungal communities across a pH gradient in an arable soil
- (2010) Johannes Rousk et al. ISME Journal
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- A Nitrospira metagenome illuminates the physiology and evolution of globally important nitrite-oxidizing bacteria
- (2010) S. Lucker et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Quantification of Key Genes Steering the Microbial Nitrogen Cycle in the Rhizosphere of Sorghum Cultivars in Tropical Agroecosystems
- (2009) B. Hai et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Phylogenetic and functional marker genes to study ammonia-oxidizing microorganisms (AOM) in the environment
- (2009) Pilar Junier et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Bacterial competition: surviving and thriving in the microbial jungle
- (2009) Michael E. Hibbing et al. NATURE REVIEWS MICROBIOLOGY
- Conservative Fragments in Bacterial 16S rRNA Genes and Primer Design for 16S Ribosomal DNA Amplicons in Metagenomic Studies
- (2009) Yong Wang et al. PLoS One
- Temporal shifts in diversity and quantity of nirS and nirK in a rice paddy field soil
- (2009) Megumi Yoshida et al. SOIL BIOLOGY & BIOCHEMISTRY
- Changes in Bacterial and Archaeal Community Structure and Functional Diversity along a Geochemically Variable Soil Profile
- (2008) C. M. Hansel et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Molybdenum limitation of asymbiotic nitrogen fixation in tropical forest soils
- (2008) Alexander R. Barron et al. Nature Geoscience
- Simultaneous Assessment of Soil Microbial Community Structure and Function through Analysis of the Meta-Transcriptome
- (2008) Tim Urich et al. PLoS One
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started