Impact of a phytoplankton bloom on the diversity of the active bacterial community in the southern North Sea as revealed by metatranscriptomic approaches

Planktomarina temperata gen. nov., sp. nov., belonging to the globally distributed RCA cluster of the marine Roseobacter clade, isolated from the German Wadden Sea

(2013) H.-A. Giebel et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Pattern and synchrony of gene expression among sympatric marine microbial populations

(2013) E. A. Ottesen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Differential effects of hydrographic and biogeochemical properties on the SAR11 clade and Roseobacter RCA cluster in the North Sea

(2012) M Sperling et al.   AQUATIC MICROBIAL ECOLOGY

Community analysis of high- and low-nucleic acid-containing bacteria in NW Mediterranean coastal waters using 16S rDNA pyrosequencing

(2012) Maria Vila-Costa et al.   ENVIRONMENTAL MICROBIOLOGY

Temporal dynamics in the free-living bacterial community composition in the coastal North Sea

(2012) Eva Sintes et al.   FEMS MICROBIOLOGY ECOLOGY

Patterns of marine bacterioplankton biodiversity in the surface waters of the Scotia Arc, Southern Ocean

(2012) Rachel E. Jamieson et al.   FEMS MICROBIOLOGY ECOLOGY

The metatranscriptome of a deep-sea hydrothermal plume is dominated by water column methanotrophs and lithotrophs

(2012) Ryan A Lesniewski et al.   ISME Journal

Expression patterns reveal niche diversification in a marine microbial assemblage

(2012) Scott M Gifford et al.   ISME Journal

Genome Sequence of Strain HIMB55, a Novel Marine Gammaproteobacterium of the OM60/NOR5 Clade

(2012) M. J. Huggett et al.   JOURNAL OF BACTERIOLOGY

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

(2012) Anna Klindworth et al.   NUCLEIC ACIDS RESEARCH

Substrate-Controlled Succession of Marine Bacterioplankton Populations Induced by a Phytoplankton Bloom

(2012) H. Teeling et al.   SCIENCE

Physiological diversity of Roseobacter clade bacteria co-occurring during a phytoplankton bloom in the North Sea

(2012) Sarah Hahnke et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

RNA-Based Assessment of Diversity and Composition of Active Archaeal Communities in the German Bight

(2012) Bernd Wemheuer et al.   ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL

Regional patterns of bacterial community composition and biogeochemical properties in the southern North Sea

(2011) B Rink et al.   AQUATIC MICROBIAL ECOLOGY

Genome content of uncultivated marine Roseobacters in the surface ocean

(2011) Haiwei Luo et al.   ENVIRONMENTAL MICROBIOLOGY

Pyrosequencing-Based Assessment of Bacterial Community Structure Along Different Management Types in German Forest and Grassland Soils

(2011) Heiko Nacke et al.   PLoS One

Horizon-Specific Bacterial Community Composition of German Grassland Soils, as Revealed by Pyrosequencing-Based Analysis of 16S rRNA Genes

(2010) C. Will et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The structure of bacterial communities in the western Arctic Ocean as revealed by pyrosequencing of 16S rRNA genes

(2010) David L. Kirchman et al.   ENVIRONMENTAL MICROBIOLOGY

Distribution of Roseobacter RCA and SAR11 lineages in the North Sea and characteristics of an abundant RCA isolate

(2010) Helge-Ansgar Giebel et al.   ISME Journal

Genome characteristics of a generalist marine bacterial lineage

(2010) Ryan J Newton et al.   ISME Journal

Distinct flavobacterial communities in contrasting water masses of the North Atlantic Ocean

(2010) Paola R Gómez-Pereira et al.   ISME Journal

Quantitative analysis of a deeply sequenced marine microbial metatranscriptome

(2010) Scott M Gifford et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Microbial community transcriptomes reveal microbes and metabolic pathways associated with dissolved organic matter turnover in the sea

(2010) J. McCarren et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Distribution ofRoseobacterRCA and SAR11 lineages and distinct bacterial communities from the subtropics to the Southern Ocean

(2009) Helge-Ansgar Giebel et al.   ENVIRONMENTAL MICROBIOLOGY

Helgoland Roads, North Sea: 45 Years of Change

(2009) Karen Helen Wiltshire et al.   Estuaries and Coasts

Diversity, ecology, and genomics of the Roseobacter clade: a short overview

(2008) Thorsten Brinkhoff et al.   ARCHIVES OF MICROBIOLOGY

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS

Major differences of bacterial diversity and activity inside and outside of a natural iron-fertilized phytoplankton bloom in the Southern Ocean

(2008) Nyree J. West et al.   ENVIRONMENTAL MICROBIOLOGY

Microbial community gene expression in ocean surface waters

(2008) J. Frias-Lopez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA