Phytohormone treatment induces generation of cryptic peptides with antimicrobial activity in the Moss Physcomitrella patens

Proteolytic ectodomain shedding of membrane proteins in mammals—hardware, concepts, and recent developments

(2018) Stefan F Lichtenthaler et al.   EMBO JOURNAL

Danger-Associated Peptides Close Stomata by OST1-Independent Activation of Anion Channels in Guard Cells

(2018) Xiaojiang Zheng et al.   PLANT CELL

Bacteria Exploit Autophagy for Proteasome Degradation and Enhanced Virulence in Plants

(2018) Suayib Üstün et al.   PLANT CELL

The host cell proteome of Physcomitrella patens harbours proteases and protease inhibitors under bioproduction conditions

(2018) Sebastian N. W. Hoernstein et al.   JOURNAL OF PROTEOME RESEARCH

Antifungal plant defensins: increased insight in their mode of action as a basis for their use to combat fungal infections

(2017) Tanne L Cools et al.   Future Microbiology

Generation of monoclonal antibodies against mitocryptide-2: toward a new strategy to investigate the biological roles of cryptides

(2017) Tatsuya Hattori et al.   JOURNAL OF PEPTIDE SCIENCE

Diverse Peptide Hormones Affecting Root Growth Identified in theMedicago truncatulaSecreted Peptidome

(2017) Neha Patel et al.   MOLECULAR & CELLULAR PROTEOMICS

Multiplexed Temporal Quantification of the Exercise-regulated Plasma Peptidome

(2017) Benjamin L. Parker et al.   MOLECULAR & CELLULAR PROTEOMICS

Limited and digestive proteolysis: crosstalk between evolutionary conserved pathways

(2017) Elena A. Minina et al.   NEW PHYTOLOGIST

Mass Spectrometry Analysis of the Extracellular Peptidome of Lactococcus lactis: Lines of Evidence for the Coexistence of Extracellular Protein Hydrolysis and Intracellular Peptide Excretion

(2016) Alain Guillot et al.   JOURNAL OF PROTEOME RESEARCH

mTORC1 and muscle regeneration are regulated by the LINC00961-encoded SPAR polypeptide

(2016) Akinobu Matsumoto et al.   NATURE

The Perseus computational platform for comprehensive analysis of (prote)omics data

(2016) Stefka Tyanova et al.   NATURE METHODS

The MaxQuant computational platform for mass spectrometry-based shotgun proteomics

(2016) Stefka Tyanova et al.   Nature Protocols

Specific pools of endogenous peptides are present in gametophore, protonema, and protoplast cells of the moss Physcomitrella patens

(2015) Igor A Fesenko et al.   BMC PLANT BIOLOGY

Leaf proteome rebalancing inNicotiana benthamianafor upstream enrichment of a transiently expressed recombinant protein

(2015) Stéphanie Robert et al.   PLANT BIOTECHNOLOGY JOURNAL

The Plant Peptidome: An Expanding Repertoire of Structural Features and Biological Functions

(2015) Patrizia Tavormina et al.   PLANT CELL

Surveying the potential of secreted antimicrobial peptides to enhance plant disease resistance

(2015) Susan Breen et al.   Frontiers in Plant Science

Posttranslationally Modified Small-Peptide Signals in Plants

(2014) Yoshikatsu Matsubayashi   Annual Review of Plant Biology

Proteomic analysis ofPhyscomitrella patenstreated with 12-oxo-phytodienoic acid, an important oxylipin in plants

(2014) Erika Toshima et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Antimicrobial function of the GAPDH-related antimicrobial peptide in the skin of skipjack tuna, Katsuwonus pelamis

(2014) Jung-Kil Seo et al.   FISH & SHELLFISH IMMUNOLOGY

Quantitative Peptidomics Study Reveals That a Wound-Induced Peptide from PR-1 Regulates Immune Signaling in Tomato

(2014) Y.-L. Chen et al.   PLANT CELL

Proteasome Inhibitors Alter Levels of Intracellular Peptides in HEK293T and SH-SY5Y Cells

(2014) Sayani Dasgupta et al.   PLoS One

Identification of novel GAPDH-derived antimicrobial peptides secreted by Saccharomyces cerevisiae and involved in wine microbial interactions

(2013) Patrícia Branco et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Plant secretome — From cellular process to biological activity

(2013) Cornelia Krause et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Analysis of peptides secreted from cultured mouse brain tissue

(2013) Julia S. Gelman et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Message in a bottle: small signalling peptide outputs during growth and development

(2013) Nathan Czyzewicz et al.   JOURNAL OF EXPERIMENTAL BOTANY

Peptides as triggers of plant defence

(2013) Markus Albert   JOURNAL OF EXPERIMENTAL BOTANY

Protein Secretome of Moss Plants (Physcomitrella patens) with Emphasis on Changes Induced by a Fungal Elicitor

(2013) Mikko T. Lehtonen et al.   JOURNAL OF PROTEOME RESEARCH

Alterations of the Intracellular Peptidome in Response to the Proteasome Inhibitor Bortezomib

(2013) Julia S. Gelman et al.   PLoS One

Small open reading frames associated with morphogenesis are hidden in plant genomes

(2013) K. Hanada et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Quantitative structure–retention relationships applied to liquid chromatography gradient elution method for the determination of carbonyl-2,4-dinitrophenylhydrazone compounds

(2012) Elisenda Cirera-Domènech et al.   JOURNAL OF CHROMATOGRAPHY A

The plant defensin RsAFP2 induces cell wall stress, septin mislocalization and accumulation of ceramides in Candida albicans

(2012) Karin Thevissen et al.   MOLECULAR MICROBIOLOGY

Physcomitrella patens activates reinforcement of the cell wall, programmed cell death and accumulation of evolutionary conserved defence signals, such as salicylic acid and 12-oxo-phytodienoic acid, but not jasmonic acid, upon Botrytis cinerea infection

(2012) INÉS PONCE DE LEÓN et al.   MOLECULAR PLANT PATHOLOGY

Probing Protein Sequences as Sources for Encrypted Antimicrobial Peptides

(2012) Guilherme D. Brand et al.   PLoS One

Analyzing the Cryptome: Uncovering Secret Sequences

(2011) Parimal Samir et al.   AAPS Journal

VennDiagram: a package for the generation of highly-customizable Venn and Euler diagrams in R

(2011) Hanbo Chen et al.   BMC BIOINFORMATICS

A plant alternative to animal caspases: subtilisin-like proteases

(2011) A B Vartapetian et al.   CELL DEATH AND DIFFERENTIATION

Border sequences of Medicago truncatula CLE36 are specifically cleaved by endoproteases common to the extracellular fluids of Medicago and soybean

(2011) Michael A. Djordjevic et al.   JOURNAL OF EXPERIMENTAL BOTANY

GmPep914, an Eight-Amino Acid Peptide Isolated from Soybean Leaves, Activates Defense-Related Genes

(2011) Y. Yamaguchi et al.   PLANT PHYSIOLOGY

Antifungal Activity of PvD1 Defensin Involves Plasma Membrane Permeabilization, Inhibition of Medium Acidification, and Induction of ROS in Fungi Cells

(2010) Erica O. Mello et al.   CURRENT MICROBIOLOGY

Phytaspase, a relocalisable cell death promoting plant protease with caspase specificity

(2010) Nina V Chichkova et al.   EMBO JOURNAL

Analysis of mouse brain peptides using mass spectrometry-based peptidomics: implications for novel functions ranging from non-classical neuropeptides to microproteins

(2010) Lloyd D. Fricker   Molecular BioSystems

Mitogen-Activated Protein Kinase Regulated by the CLAVATA Receptors Contributes to Shoot Apical Meristem Homeostasis

(2010) Shigeyuki Betsuyaku et al.   PLANT AND CELL PHYSIOLOGY

Characterization of a CLE processing activity

(2010) Jun Ni et al.   PLANT MOLECULAR BIOLOGY

A subtilisin-like protein from soybean contains an embedded, cryptic signal that activates defense-related genes

(2010) G. Pearce et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

CLE peptide signaling during plant development

(2009) Guodong Wang et al.   PROTOPLASMA

Peptidase substrates via global peptide profiling

(2008) Debarati M Tagore et al.   Nature Chemical Biology

Agar and broth dilution methods to determine the minimal inhibitory concentration (MIC) of antimicrobial substances

(2008) Irith Wiegand et al.   Nature Protocols

The Receptor Kinase CORYNE of Arabidopsis Transmits the Stem Cell-Limiting Signal CLAVATA3 Independently of CLAVATA1

(2008) R. Muller et al.   PLANT CELL

Effect of methyl jasmonate in combination with carbohydrates on gene expression of PR proteins, stilbene and anthocyanin accumulation in grapevine cell cultures

(2008) Assia Belhadj et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY