Viral and metabolic controls on high rates of microbial sulfur and carbon cycling in wetland ecosystems
出版年份 2018 全文链接
标题
Viral and metabolic controls on high rates of microbial sulfur and carbon cycling in wetland ecosystems
作者
关键词
Sulfate reduction, Methane, Wetlands, Viruses, Alcohols, C1 metabolism
出版物
Microbiome
Volume 6, Issue 1, Pages -
出版商
Springer Nature America, Inc
发表日期
2018-08-08
DOI
10.1186/s40168-018-0522-4
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Expanded diversity of microbial groups that shape the dissimilatory sulfur cycle
- (2018) Karthik Anantharaman et al. ISME Journal
- Large but variable methane production in anoxic freshwater sediment upon addition of allochthonous and autochthonous organic matter
- (2018) Charlotte Grasset et al. LIMNOLOGY AND OCEANOGRAPHY
- The deep-subsurface sulfate reducer Desulfotomaculum kuznetsovii employs two methanol-degrading pathways
- (2018) Diana Z. Sousa et al. Nature Communications
- Mimicking microbial interactions under nitrate-reducing conditions in an anoxic bioreactor: enrichment of novel Nitrospirae bacteria distantly related to Thermodesulfovibrio
- (2017) Arslan Arshad et al. ENVIRONMENTAL MICROBIOLOGY
- Abundant carbon substrates drive extremely high sulfate reduction rates and methane fluxes in Prairie Pothole Wetlands
- (2017) Paula Dalcin Martins et al. GLOBAL CHANGE BIOLOGY
- Potential for microbial H2 and metal transformations associated with novel bacteria and archaea in deep terrestrial subsurface sediments
- (2017) Alex W Hernsdorf et al. ISME Journal
- Disguised as a Sulfate Reducer: Growth of the Deltaproteobacterium Desulfurivibrio alkaliphilus by Sulfide Oxidation with Nitrate
- (2017) Casper Thorup et al. mBio
- Growth Characteristics of Methanomassiliicoccus luminyensis and Expression of Methyltransferase Encoding Genes
- (2017) Lena Kröninger et al. ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL
- vConTACT: an iVirus tool to classify double-stranded DNA viruses that infect Archaea and Bacteria
- (2017) Benjamin Bolduc et al. PeerJ
- Viruses in Soil Ecosystems: An Unknown Quantity Within an Unexplored Territory
- (2017) Kurt E. Williamson et al. Annual Review of Virology
- New roles in hemicellulosic sugar fermentation for the uncultivated Bacteroidetes family BS11
- (2016) Lindsey M Solden et al. ISME Journal
- Chasing the elusive Euryarchaeota class WSA2: genomes reveal a uniquely fastidious methyl-reducing methanogen
- (2016) Masaru Konishi Nobu et al. ISME Journal
- Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses
- (2016) Simon Roux et al. NATURE
- Uncovering Earth’s virome
- (2016) David Paez-Espino et al. NATURE
- Large contribution to inland water CO2 and CH4 emissions from very small ponds
- (2016) Meredith A. Holgerson et al. Nature Geoscience
- Alignment-free $d_2^*$ oligonucleotide frequency dissimilarity measure improves prediction of hosts from metagenomically-derived viral sequences
- (2016) Nathan A. Ahlgren et al. NUCLEIC ACIDS RESEARCH
- Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees
- (2016) Ivica Letunic et al. NUCLEIC ACIDS RESEARCH
- IMG/M: integrated genome and metagenome comparative data analysis system
- (2016) I-Min A. Chen et al. NUCLEIC ACIDS RESEARCH
- Temperature and Hydrology Affect Methane Emissions from Prairie Pothole Wetlands
- (2016) Sheel Bansal et al. WETLANDS
- The iPlant Collaborative: Cyberinfrastructure for Enabling Data to Discovery for the Life Sciences
- (2016) Nirav Merchant et al. PLOS BIOLOGY
- Viruses as Winners in the Game of Life
- (2016) Ana Georgina Cobián Güemes et al. Annual Review of Virology
- Novel Insights into the Distribution of Reduced Sulfur Species in Prairie Pothole Wetland Pore Waters Provided by Bismuth Film Electrodes
- (2016) Brandon C. McAdams et al. Environmental Science & Technology Letters
- Microbial metabolisms in a 2.5-km-deep ecosystem created by hydraulic fracturing in shales
- (2016) Rebecca A. Daly et al. Nature Microbiology
- MaxBin 2.0: an automated binning algorithm to recover genomes from multiple metagenomic datasets
- (2015) Yu-Wei Wu et al. BIOINFORMATICS
- MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph
- (2015) Dinghua Li et al. BIOINFORMATICS
- The isolation and characterization of two Stenotrophomonas maltophilia bacteriophages capable of cross-taxonomic order infectivity
- (2015) Danielle L. Peters et al. BMC GENOMICS
- Unravelling the one-carbon metabolism of the acetogen S poromusa strain An4 by genome and proteome analysis
- (2015) Michael Visser et al. ENVIRONMENTAL MICROBIOLOGY
- CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
- (2015) Donovan H. Parks et al. GENOME RESEARCH
- Measuring biogeochemical heterogeneity at the micro scale in soils and sediments
- (2015) Lasse L. Pedersen et al. SOIL BIOLOGY & BIOCHEMISTRY
- Effects of viruses on bacterial functions under contrasting nutritional conditions for four species of bacteria isolated from Hong Kong waters
- (2015) Hao Liu et al. Scientific Reports
- Niche distribution and influence of environmental parameters in marine microbial communities: a systematic review
- (2015) Felipe H. Coutinho et al. PeerJ
- VirSorter: mining viral signal from microbial genomic data
- (2015) Simon Roux et al. PeerJ
- MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
- (2015) Dongwan D. Kang et al. PeerJ
- Genomic resolution of linkages in carbon, nitrogen, and sulfur cycling among widespread estuary sediment bacteria
- (2015) Brett J Baker et al. Microbiome
- The “bacterial heterodisulfide” DsrC is a key protein in dissimilatory sulfur metabolism
- (2014) S.S. Venceslau et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- Hydrogeochemistry of prairie pothole region wetlands: Role of long-term critical zone processes
- (2014) Martin B. Goldhaber et al. CHEMICAL GEOLOGY
- Methanosarcina spelaei sp. nov., a methanogenic archaeon isolated from a floating biofilm of a subsurface sulphurous lake
- (2014) L. Ganzert et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Correlation between viral production and carbon mineralization under nitrate-reducing conditions in aquifer sediment
- (2014) Donald Pan et al. ISME Journal
- Response of Bacterial Metabolic Activity to Riverine Dissolved Organic Carbon and Exogenous Viruses in Estuarine and Coastal Waters: Implications for CO2 Emission
- (2014) Jie Xu et al. PLoS One
- A nonpyrrolysine member of the widely distributed trimethylamine methyltransferase family is a glycine betaine methyltransferase
- (2014) T. Ticak et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Improved Assemblies Using a Source-Agnostic Pipeline for MetaGenomic Assembly by Merging (MeGAMerge) of Contigs
- (2014) Matthew Scholz et al. Scientific Reports
- Microscale Characterization of Sulfur Speciation in Lake Sediments
- (2013) Teng Zeng et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Sources and composition of sediment pore-water dissolved organic matter in prairie pothole lakes
- (2013) Kate L. Ziegelgruber et al. LIMNOLOGY AND OCEANOGRAPHY
- Crass: identification and reconstruction of CRISPR from unassembled metagenomic data
- (2013) Connor T. Skennerton et al. NUCLEIC ACIDS RESEARCH
- Regulation of bacterial metabolic activity by dissolved organic carbon and viruses
- (2013) Jie Xu et al. Journal of Geophysical Research-Biogeosciences
- Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
- (2012) M. Kearse et al. BIOINFORMATICS
- Potential for Abiotic Reduction of Pesticides in Prairie Pothole Porewaters
- (2012) Teng Zeng et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Correction to Pesticide Processing Potential in Prairie Pothole Porewaters
- (2012) Teng Zeng et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Fermentation, Hydrogen, and Sulfur Metabolism in Multiple Uncultivated Bacterial Phyla
- (2012) K. C. Wrighton et al. SCIENCE
- Marine Microbes See a Sea of Gradients
- (2012) R. Stocker SCIENCE
- Determining Host Metabolic Limitations on Viral Replication via Integrated Modeling and Experimental Perturbation
- (2012) Elsa W. Birch et al. PLoS Computational Biology
- ProtTest 3: fast selection of best-fit models of protein evolution
- (2011) Diego Darriba et al. BIOINFORMATICS
- Prodigal: prokaryotic gene recognition and translation initiation site identification
- (2010) Doug Hyatt et al. BMC BIOINFORMATICS
- Methanosarcina horonobensis sp. nov., a methanogenic archaeon isolated from a deep subsurface Miocene formation
- (2010) S. Shimizu et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Effect of top-down control on cell-specific activity and diversity of active marine bacterioplankton
- (2009) K Longnecker et al. AQUATIC MICROBIAL ECOLOGY
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Wet and Wonderful: The World's Largest Wetlands Are Conservation Priorities
- (2009) Paul A. Keddy et al. BIOSCIENCE
- Methanofollis ethanolicus sp. nov., an ethanol-utilizing methanogen isolated from a lotus field
- (2009) H. Imachi et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Niche differentiation among sulfur-oxidizing bacterial populations in cave waters
- (2008) Jennifer L Macalady et al. ISME Journal
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