Genomic resolution of linkages in carbon, nitrogen, and sulfur cycling among widespread estuary sediment bacteria
出版年份 2015 全文链接
标题
Genomic resolution of linkages in carbon, nitrogen, and sulfur cycling among widespread estuary sediment bacteria
作者
关键词
Estuary, Sediment, Metagenome, Sulfur, Nitrogen, Carbon, Candidate phyla, Anaerobic respiration, Sulfate reduction
出版物
Microbiome
Volume 3, Issue 1, Pages -
出版商
Springer Nature
发表日期
2015-04-03
DOI
10.1186/s40168-015-0077-6
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Environmental controls on intragroup diversity of the uncultured benthicarchaeaof the miscellaneous Crenarchaeotal group lineage naturally enriched in anoxic sediments of the White Oak River estuary (North Carolina, USA)
- (2015) Cassandre Sara Lazar et al. ENVIRONMENTAL MICROBIOLOGY
- Refined NrfA Phylogeny Improves PCR-BasednrfAGene Detection
- (2014) Allana Welsh et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Metabolic interdependencies between phylogenetically novel fermenters and respiratory organisms in an unconfined aquifer
- (2014) Kelly C Wrighton et al. ISME Journal
- PhyloSift: phylogenetic analysis of genomes and metagenomes
- (2014) Aaron E. Darling et al. PeerJ
- Genome sequencing of a single cell of the widely distributed marine subsurface Dehalococcoidia, phylum Chloroflexi
- (2013) Kenneth Wasmund et al. ISME Journal
- Sulfide oxidation, nitrate respiration, carbon acquisition, and electron transport pathways suggested by the draft genome of a single orange Guaymas Basin Beggiatoa (Cand. Maribeggiatoa) sp. filament
- (2013) Barbara J. MacGregor et al. Marine Genomics
- Predominant archaea in marine sediments degrade detrital proteins
- (2013) Karen G. Lloyd et al. NATURE
- The changing carbon cycle of the coastal ocean
- (2013) James E. Bauer et al. NATURE
- The carbohydrate-active enzymes database (CAZy) in 2013
- (2013) Vincent Lombard et al. NUCLEIC ACIDS RESEARCH
- Bacterial Community Composition of South China Sea Sediments through Pyrosequencing-Based Analysis of 16S rRNA Genes
- (2013) Daochen Zhu et al. PLoS One
- Rapid electron exchange between surface-exposed bacterial cytochromes and Fe(III) minerals
- (2013) G. F. White et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Extraordinary phylogenetic diversity and metabolic versatility in aquifer sediment
- (2013) Cindy J. Castelle et al. Nature Communications
- Links between metabolic plasticity and functional redundancy in freshwater bacterioplankton communities
- (2013) Jérôme Comte et al. Frontiers in Microbiology
- Community genomic analyses constrain the distribution of metabolic traits across the Chloroflexi phylum and indicate roles in sediment carbon cycling
- (2013) Laura A Hug et al. Microbiome
- Phylogenetic Distribution of Potential Cellulases in Bacteria
- (2012) Renaud Berlemont et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
- (2012) Y. Peng et al. BIOINFORMATICS
- Time series community genomics analysis reveals rapid shifts in bacterial species, strains, and phage during infant gut colonization
- (2012) I. Sharon et al. GENOME RESEARCH
- Salt marsh sediment diversity: a test of the variability of the rare biosphere among environmental replicates
- (2012) Jennifer L Bowen et al. ISME Journal
- Archaea of the Miscellaneous Crenarchaeotal Group are abundant, diverse and widespread in marine sediments
- (2012) Kyoko Kubo et al. ISME Journal
- Microbial Community Analysis of a Coastal Salt Marsh Affected by the Deepwater Horizon Oil Spill
- (2012) Melanie J. Beazley et al. PLoS One
- Surface multiheme c-type cytochromes from Thermincola potens and implications for respiratory metal reduction by Gram-positive bacteria
- (2012) H. K. Carlson et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Fermentation, Hydrogen, and Sulfur Metabolism in Multiple Uncultivated Bacterial Phyla
- (2012) K. C. Wrighton et al. SCIENCE
- Reconstruction of Extracellular Respiratory Pathways for Iron(III) Reduction in Shewanella Oneidensis Strain MR-1
- (2012) Dan Coursolle et al. Frontiers in Microbiology
- Stratification of Archaeal communities in shallow sediments of the Pearl River Estuary, Southern China
- (2011) Lijing Jiang et al. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
- IMG: the integrated microbial genomes database and comparative analysis system
- (2011) V. M. Markowitz et al. NUCLEIC ACIDS RESEARCH
- EMIRGE: reconstruction of full-length ribosomal genes from microbial community short read sequencing data
- (2011) Christopher S Miller et al. GENOME BIOLOGY
- Estuarine and Coastal Ocean Carbon Paradox: CO2 Sinks or Sites of Terrestrial Carbon Incineration?
- (2010) Wei-Jun Cai Annual Review of Marine Science
- Microbial Extracellular Enzymes and the Marine Carbon Cycle
- (2010) Carol Arnosti Annual Review of Marine Science
- Genomic Insights into Syntrophy: The Paradigm for Anaerobic Metabolic Cooperation
- (2010) Jessica R. Sieber et al. Annual Review of Microbiology
- Hitherto Unknown [Fe-Fe]-Hydrogenase Gene Diversity in Anaerobes and Anoxic Enrichments from a Moderately Acidic Fen
- (2010) O. Schmidt et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Novel groups of Gammaproteobacteria catalyse sulfur oxidation and carbon fixation in a coastal, intertidal sediment
- (2010) Sabine Lenk et al. ENVIRONMENTAL MICROBIOLOGY
- Targeted Discovery of Glycoside Hydrolases from a Switchgrass-Adapted Compost Community
- (2010) Martin Allgaier et al. PLoS One
- Regulation of dsr genes encoding proteins responsible for the oxidation of stored sulfur in Allochromatium vinosum
- (2009) F. Grimm et al. MICROBIOLOGY-SGM
- Community-wide analysis of microbial genome sequence signatures
- (2009) Gregory J Dick et al. GENOME BIOLOGY
- Reverse dissimilatory sulfite reductase as phylogenetic marker for a subgroup of sulfur-oxidizing prokaryotes
- (2008) Alexander Loy et al. ENVIRONMENTAL MICROBIOLOGY
- Thermodesulfovibrio aggregans sp. nov. and Thermodesulfovibrio thiophilus sp. nov., anaerobic, thermophilic, sulfate-reducing bacteria isolated from thermophilic methanogenic sludge, and emended description of the genus Thermodesulfovibrio
- (2008) Y. Sekiguchi et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environment
- (2008) J. F. Biddle et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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