Genome-scale data suggest reclassifications in the Leisingera-Phaeobacter cluster including proposals for Sedimentitalea gen. nov. and Pseudophaeobacter gen. nov.
出版年份 2014 全文链接
标题
Genome-scale data suggest reclassifications in the Leisingera-Phaeobacter cluster including proposals for Sedimentitalea gen. nov. and Pseudophaeobacter gen. nov.
作者
关键词
-
出版物
Frontiers in Microbiology
Volume 5, Issue -, Pages -
出版商
Frontiers Media SA
发表日期
2014-08-11
DOI
10.3389/fmicb.2014.00416
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Phaeobacter aquaemixtae sp. nov., isolated from the junction between the ocean and a freshwater spring
- (2014) S. Park et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Puniceibacterium antarcticum gen. nov., sp. nov., isolated from seawater
- (2014) C. Liu et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Taxonomic use of DNA G+C content and DNA–DNA hybridization in the genomic age
- (2014) Jan P. Meier-Kolthoff et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Complete genome sequence of the Phaeobacter gallaeciensis type strain CIP 105210T (= DSM 26640T = BS107T)
- (2014) Oliver Frank et al. Standards in Genomic Sciences
- Genome sequence and emended description of Leisingera nanhaiensis strain DSM 24252T isolated from marine sediment
- (2014) Sven Breider et al. Standards in Genomic Sciences
- Genome sequence-based species delimitation with confidence intervals and improved distance functions
- (2013) Jan P Meier-Kolthoff et al. BMC BIOINFORMATICS
- Phaeobacter leonis sp. nov., an alphaproteobacterium from Mediterranean Sea sediments
- (2013) F. Gaboyer et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Molecular and phenotypic analyses reveal the non-identity of the Phaeobacter gallaeciensis type strain deposits CIP 105210T and DSM 17395
- (2013) N. Buddruhs et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Genome sequence of Phaeobacter daeponensis type strain (DSM 23529T), a facultatively anaerobic bacterium isolated from marine sediment, and emendation of Phaeobacter daeponensis
- (2013) Marco Dogs et al. Standards in Genomic Sciences
- Complete genome sequence of the marine methyl-halide oxidizing Leisingera methylohalidivorans type strain (DSM 14336T), a representative of the Roseobacter clade
- (2013) Nora Buddruhs et al. Standards in Genomic Sciences
- Genome sequence of the Leisingera aquimarina type strain (DSM 24565T), a member of the marine Roseobacter clade rich in extrachromosomal elements
- (2013) Thomas Riedel et al. Standards in Genomic Sciences
- Genome sequence of the phage-gene rich marine Phaeobacter arcticus type strain DSM 23566T
- (2013) Heike M. Freese et al. Standards in Genomic Sciences
- Genome sequence of Phaeobacter inhibens type strain (T5T), a secondary metabolite producing representative of the marine Roseobacter clade, and emendation of the species description of Phaeobacter inhibens
- (2013) Marco Dogs et al. Standards in Genomic Sciences
- Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1T), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta, and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov., Treponema stenostrepta comb. nov., and Treponema zuelzerae comb. nov., and emendation of the genus Treponema
- (2013) Birte Abt et al. Standards in Genomic Sciences
- Phylogeny-driven target selection for large-scale genome-sequencing (and other) projects
- (2013) Markus Göker et al. Standards in Genomic Sciences
- Genome sequence of Phaeobacter caeruleus type strain (DSM 24564T), a surface-associated member of the marine Roseobacter clade
- (2013) Paul G. Beyersmann et al. Standards in Genomic Sciences
- Comparative genomics of methylated amine utilization by marine Roseobacter clade bacteria and development of functional gene markers (tmm, gmaS)
- (2012) Yin Chen ENVIRONMENTAL MICROBIOLOGY
- Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1T), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus Sphaerochaeta
- (2012) Birte Abt et al. Standards in Genomic Sciences
- Tropicibacter multivorans sp. nov., an aerobic alphaproteobacterium isolated from surface seawater
- (2011) T. Lucena et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Tropodithietic Acid Production in Phaeobacter gallaeciensis Is Regulated by N-Acyl Homoserine Lactone-Mediated Quorum Sensing
- (2011) M. Berger et al. JOURNAL OF BACTERIOLOGY
- Novel Insights into the Diversity of Catabolic Metabolism from Ten Haloarchaeal Genomes
- (2011) Iain Anderson et al. PLoS One
- Codivergence of Mycoviruses with Their Hosts
- (2011) Markus Göker et al. PLoS One
- Release LTPs104 of the All-Species Living Tree
- (2011) Raúl Munoz et al. SYSTEMATIC AND APPLIED MICROBIOLOGY
- Litorimicrobium taeanense gen. nov., sp. nov., isolated from a sandy beach
- (2010) H. M. Jin et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Genome characteristics of a generalist marine bacterial lineage
- (2010) Ryan J Newton et al. ISME Journal
- How Many Bootstrap Replicates Are Necessary?
- (2010) Nicholas D. Pattengale et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- A Phylogenomic Approach to Resolve the Arthropod Tree of Life
- (2010) K. Meusemann et al. MOLECULAR BIOLOGY AND EVOLUTION
- En route to a genome-based classification of Archaea and Bacteria?
- (2010) H.-P. Klenk et al. SYSTEMATIC AND APPLIED MICROBIOLOGY
- Standard operating procedure for calculating genome-to-genome distances based on high-scoring segment pairs
- (2010) Alexander F. Auch et al. Standards in Genomic Sciences
- Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison
- (2010) Alexander F. Auch et al. Standards in Genomic Sciences
- The Genome Sequence ofMethanohalophilus mahiiSLPTReveals Differences in the Energy Metabolism among Members of theMethanosarcinaceaeInhabiting Freshwater and Saline Environments
- (2010) Stefan Spring et al. ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL
- Leisingera nanhaiensis sp. nov., isolated from marine sediment
- (2009) F. Sun et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Seohaeicola saemankumensis gen. nov., sp. nov., isolated from a tidal flat
- (2009) J.-H. Yoon et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Phaeobacter caeruleus sp. nov., a blue-coloured, colony-forming bacterium isolated from a marine electroactive biofilm
- (2009) I. Vandecandelaere et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Evidence, Content and Corroboration and the Tree of Life
- (2008) E. Kurt Lienau et al. ACTA BIOTHEORETICA
- Genetic Dissection of Tropodithietic Acid Biosynthesis by Marine Roseobacters
- (2008) H. Geng et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Diversity, ecology, and genomics of the Roseobacter clade: a short overview
- (2008) Thorsten Brinkhoff et al. ARCHIVES OF MICROBIOLOGY
- Leisingera aquimarina sp. nov., isolated from a marine electroactive biofilm, and emended descriptions of Leisingera methylohalidivorans Schaefer et al. 2002, Phaeobacter daeponensis Yoon et al. 2007 and Phaeobacter inhibens Martens et al. 2006
- (2008) I. Vandecandelaere et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Phaeobacter arcticus sp. nov., a psychrophilic bacterium isolated from the Arctic
- (2008) D.-C. Zhang et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Pelagicola litoralis gen. nov., sp. nov., isolated from coastal water in Korea
- (2008) Y.-G. Kim et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Wohlfahrtiimonas chitiniclastica gen. nov., sp. nov., a new gammaproteobacterium isolated from Wohlfahrtia magnifica (Diptera: Sarcophagidae)
- (2008) E. M. Toth et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- An Improved General Amino Acid Replacement Matrix
- (2008) S. Q. Le et al. MOLECULAR BIOLOGY AND EVOLUTION
- A Rapid Bootstrap Algorithm for the RAxML Web Servers
- (2008) Alexandros Stamatakis et al. SYSTEMATIC BIOLOGY
- A simple, fast, and accurate method of phylogenomic inference
- (2008) Martin Wu et al. GENOME BIOLOGY
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started