Transcriptome Sequencing and Metabolism Analysis Reveals the role of Cyanidin Metabolism in Dark-red Onion (Allium cepa L.) Bulbs

Quantification and analysis of anthocyanin and flavonoids compositions, and antioxidant activities in onions with three different colors

(2016) Shi-lin ZHANG et al.   Journal of Integrative Agriculture

Transcriptome Analysis of Sucrose Metabolism during Bulb Swelling and Development in Onion (Allium cepa L.)

(2016) Chunsha Zhang et al.   Frontiers in Plant Science

Comparative Transcriptome Analysis of White and Purple Potato to Identify Genes Involved in Anthocyanin Biosynthesis

(2015) Yuhui Liu et al.   PLoS One

Variation of anthocyanins and flavonols in Vaccinium uliginosum berry in Lesser Khingan Mountains and its antioxidant activity

(2014) Li-Jin Wang et al.   FOOD CHEMISTRY

Transcriptional control of floral anthocyanin pigmentation in monkeyflowers (Mimulus)

(2014) Yao-Wu Yuan et al.   NEW PHYTOLOGIST

Total phenolics, antioxidant and xanthine oxidase inhibitory activity of three colored onions (Allium cepaL.)

(2014) Shivraj Hariram Nile et al.   Frontiers in Life Science

EBSeq: an empirical Bayes hierarchical model for inference in RNA-seq experiments

(2013) Ning Leng et al.   BIOINFORMATICS

Flower colour and cytochromes P450

(2013) Y. Tanaka et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Introduction of apple ANR genes into tobacco inhibits expression of both CHI and DFR genes in flowers, leading to loss of anthocyanin

(2012) Yuepeng Han et al.   JOURNAL OF EXPERIMENTAL BOTANY

MdCOP1 Ubiquitin E3 Ligases Interact with MdMYB1 to Regulate Light-Induced Anthocyanin Biosynthesis and Red Fruit Coloration in Apple

(2012) Y.-Y. Li et al.   PLANT PHYSIOLOGY

A systems approach to identifying correlated gene targets for the loss of colour pigmentation in plants

(2011) Sangaalofa T Clark et al.   BMC BIOINFORMATICS

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Anthocyanin Accumulation and Expression of Anthocyanin Biosynthetic Genes in Radish (Raphanus sativus)

(2011) Nam Il Park et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Gene Loss and Parallel Evolution Contribute to Species Difference in Flower Color

(2011) S. D. Smith et al.   MOLECULAR BIOLOGY AND EVOLUTION

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases

(2011) Chen Xie et al.   NUCLEIC ACIDS RESEARCH

Recent advances on the regulation of anthocyanin synthesis in reproductive organs

(2011) Katia Petroni et al.   PLANT SCIENCE

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Identification of anthocyanins in muscadine grapes with HPLC-ESI-MS

(2008) Zhiliang Huang et al.   LWT-FOOD SCIENCE AND TECHNOLOGY

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Biosynthesis of plant pigments: anthocyanins, betalains and carotenoids

(2008) Yoshikazu Tanaka et al.   PLANT JOURNAL