标题
Exploring the metabolic state of microorganisms using metabolomics
作者
关键词
-
出版物
Bioanalysis
Volume 3, Issue 21, Pages 2443-2458
出版商
Future Science, LTD
发表日期
2011-11-10
DOI
10.4155/bio.11.248
参考文献
相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。- Current medical research with the application of coupled techniques with mass spectrometry
- (2013) Joanna Kałużna-Czaplińska MEDICAL SCIENCE MONITOR
- Expanding Coverage of the Metabolome for Global Metabolite Profiling
- (2011) Oscar Yanes et al. ANALYTICAL CHEMISTRY
- PeakML/mzMatch: A File Format, Java Library, R Library, and Tool-Chain for Mass Spectrometry Data Analysis
- (2011) Richard A. Scheltema et al. ANALYTICAL CHEMISTRY
- Riboneogenesis in Yeast
- (2011) Michelle F. Clasquin et al. CELL
- Algorithms and tools for the preprocessing of LC–MS metabolomics data
- (2011) Sandra Castillo et al. CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS
- Specific biomarkers for stochastic division patterns and starvation-induced quiescence under limited glucose levels in fission yeast
- (2011) Tomáš Pluskal et al. FEBS Journal
- Impact ofSalmonellaInfection on Host Hormone Metabolism Revealed by Metabolomics
- (2011) L. Caetano M. Antunes et al. INFECTION AND IMMUNITY
- Metabolomics, Pathway Regulation, and Pathway Discovery
- (2011) Guo-Fang Zhang et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Mass Spectrometry Strategies in Metabolomics
- (2011) Zhentian Lei et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- 1H NMR-based Metabolomic Profiling in Mice Infected withMycobacterium tuberculosis
- (2011) Ji-Hyun Shin et al. JOURNAL OF PROTEOME RESEARCH
- Advantages of Tandem LC−MS for the Rapid Assessment of Tissue-Specific Metabolic Complexity Using a Pentafluorophenylpropyl Stationary Phase
- (2011) Haitao Lv et al. JOURNAL OF PROTEOME RESEARCH
- Bioinformatics tools for cancer metabolomics
- (2011) Grigoriy Blekherman et al. Metabolomics
- A metabolomics and proteomics study of the adaptation of Staphylococcus aureus to glucose starvation
- (2011) Manuel Liebeke et al. Molecular BioSystems
- A genome-wide association study of metabolic traits in human urine
- (2011) Karsten Suhre et al. NATURE GENETICS
- Advances in mass spectrometry applied to pharmaceutical metabolomics
- (2010) Dieter M. Drexler et al. ANALYTICAL AND BIOANALYTICAL CHEMISTRY
- Towards an unbiased metabolic profiling of protozoan parasites: optimisation of a Leishmania sampling protocol for HILIC-orbitrap analysis
- (2010) Ruben t’Kindt et al. ANALYTICAL AND BIOANALYTICAL CHEMISTRY
- Quantitative liquid chromatography–tandem mass spectrometry profiling of activated methyl cycle metabolites involved in LuxS-dependent quorum sensing in Escherichia coli
- (2010) N.M. Halliday et al. ANALYTICAL BIOCHEMISTRY
- Optimization and Evaluation of Metabolite Extraction Protocols for Untargeted Metabolic Profiling of Liver Samples by UPLC-MS
- (2010) Perrine Masson et al. ANALYTICAL CHEMISTRY
- Ultrahigh Performance Liquid Chromatography−Tandem Mass Spectrometry Method for Fast and Robust Quantification of Anionic and Aromatic Metabolites
- (2010) Joerg Martin Buescher et al. ANALYTICAL CHEMISTRY
- Link between Phosphate Starvation and Glycogen Metabolism in Corynebacterium glutamicum, Revealed by Metabolomics
- (2010) H. M. Woo et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Metabolomic Characterization of the Salt Stress Response in Streptomyces coelicolor
- (2010) S. Kol et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Metabolic fluxes and beyond—systems biology understanding and engineering of microbial metabolism
- (2010) Michael Kohlstedt et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data
- (2010) Tomáš Pluskal et al. BMC BIOINFORMATICS
- Systems level studies of mammalian metabolomes: the roles of mass spectrometry and nuclear magnetic resonance spectroscopy
- (2010) Warwick B. Dunn et al. CHEMICAL SOCIETY REVIEWS
- Metabolomics of Mycobacterium tuberculosis Reveals Compartmentalized Co-Catabolism of Carbon Substrates
- (2010) Luiz Pedro S. de Carvalho et al. CHEMISTRY & BIOLOGY
- From fluxes and isotope labeling patterns towards in silico cells
- (2010) Michael Dauner CURRENT OPINION IN BIOTECHNOLOGY
- Metabolomics in systems microbiology
- (2010) Marshall Louis Reaves et al. CURRENT OPINION IN BIOTECHNOLOGY
- Systems biology of microbial metabolism
- (2010) Matthias Heinemann et al. CURRENT OPINION IN MICROBIOLOGY
- Differential glucose repression in common yeast strains in response to HXK2 deletion
- (2010) Anne Kümmel et al. FEMS YEAST RESEARCH
- Alternative Route for Glyoxylate Consumption during Growth on Two-Carbon Compounds by Methylobacterium extorquens AM1
- (2010) Y. Okubo et al. JOURNAL OF BACTERIOLOGY
- Streamlined pentafluorophenylpropyl column liquid chromatography–tandem quadrupole mass spectrometry and global 13C-labeled internal standards improve performance for quantitative metabolomics in bacteria
- (2010) Song Yang et al. JOURNAL OF CHROMATOGRAPHY A
- Dealing with the unknown: Metabolomics and Metabolite Atlases
- (2010) Benjamin P. Bowen et al. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY
- Control of ATP homeostasis during the respiro-fermentative transition in yeast
- (2010) Thomas Walther et al. Molecular Systems Biology
- What is flux balance analysis?
- (2010) Jeffrey D Orth et al. NATURE BIOTECHNOLOGY
- A protocol for generating a high-quality genome-scale metabolic reconstruction
- (2010) Ines Thiele et al. Nature Protocols
- Exploiting plug-and-play synthetic biology for drug discovery and production in microorganisms
- (2010) Marnix H. Medema et al. NATURE REVIEWS MICROBIOLOGY
- EcoCyc: a comprehensive database of Escherichia coli biology
- (2010) I. M. Keseler et al. NUCLEIC ACIDS RESEARCH
- The potential of metabolomics for Leishmania research in the post-genomics era
- (2010) RICHARD A. SCHELTEMA et al. PARASITOLOGY
- A Global Metabolic Shift Is Linked to Salmonella Multicellular Development
- (2010) Aaron P. White et al. PLoS One
- Yeast Biological Networks Unfold the Interplay of Antioxidants, Genome and Phenotype, and Reveal a Novel Regulator of the Oxidative Stress Response
- (2010) Jose M. Otero et al. PLoS One
- Prediction of metabolic fluxes by incorporating genomic context and flux-converging pattern analyses
- (2010) J. M. Park et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Transcriptional patterns in both host and bacterium underlie a daily rhythm of anatomical and metabolic change in a beneficial symbiosis
- (2010) A. M. Wier et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Simultaneous quantification of free nucleotides in complex biological samples using ion pair reversed phase liquid chromatography isotope dilution tandem mass spectrometry
- (2009) Reza M. Seifar et al. ANALYTICAL BIOCHEMISTRY
- Cross-Platform Comparison of Methods for Quantitative Metabolomics of Primary Metabolism
- (2009) Jörg Martin Büscher et al. ANALYTICAL CHEMISTRY
- High-Throughput Quantitative Metabolomics: Workflow for Cultivation, Quenching, and Analysis of Yeast in a Multiwell Format
- (2009) Jennifer Christina Ewald et al. ANALYTICAL CHEMISTRY
- Quantitative Evaluation of Intracellular Metabolite Extraction Techniques for Yeast Metabolomics
- (2009) André B. Canelas et al. ANALYTICAL CHEMISTRY
- Connecting extracellular metabolomic measurements to intracellular flux states in yeast
- (2009) Monica L Mo et al. BMC Systems Biology
- Host-Parasite Interactions Revealed by Plasmodium falciparum Metabolomics
- (2009) Kellen L. Olszewski et al. Cell Host & Microbe
- The Application of Chromatography-Mass Spectrometry: Methods to Metabonomics
- (2009) Zeming Wu et al. CHROMATOGRAPHIA
- What can metabolomics learn from genomics and proteomics?
- (2009) Masanori Arita CURRENT OPINION IN BIOTECHNOLOGY
- Novel biological insights through metabolomics and 13C-flux analysis
- (2009) Nicola Zamboni et al. CURRENT OPINION IN MICROBIOLOGY
- Liquid chromatography–tandem quadrupole mass spectrometry and comprehensive two-dimensional gas chromatography–time-of-flight mass spectrometry measurement of targeted metabolites of Methylobacterium extorquens AM1 grown on two different carbon sources
- (2009) Song Yang et al. JOURNAL OF CHROMATOGRAPHY A
- Mass-spectrometry-based metabolomics: limitations and recommendations for future progress with particular focus on nutrition research
- (2009) Augustin Scalbert et al. Metabolomics
- A metabolomic and multivariate statistical process to assess the effects of genotoxins in Saccharomycescerevisiae
- (2009) Christopher M. Titman et al. Molecular BioSystems
- The ethanolamine branch of the Kennedy pathway is essential in the bloodstream form ofTrypanosoma brucei
- (2009) Federica Gibellini et al. MOLECULAR MICROBIOLOGY
- Metabolomics-driven quantitative analysis of ammonia assimilation in E. coli
- (2009) Jie Yuan et al. Molecular Systems Biology
- Absolute metabolite concentrations and implied enzyme active site occupancy in Escherichia coli
- (2009) Bryson D Bennett et al. Nature Chemical Biology
- System-wide molecular evidence for phenotypic buffering in Arabidopsis
- (2009) Jingyuan Fu et al. NATURE GENETICS
- Use of reverse-phase liquid chromatography, linked to tandem mass spectrometry, to profile the Calvin cycle and other metabolic intermediates in Arabidopsis rosettes at different carbon dioxide concentrations
- (2009) Stéphanie Arrivault et al. PLANT JOURNAL
- Demonstration of the ethylmalonyl-CoA pathway by using 13C metabolomics
- (2009) R. Peyraud et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Mass spectrometry-based technologies for high-throughput metabolomics
- (2009) Jun Han et al. Bioanalysis
- Metabolomics approach for determining growth-specific metabolites based on Fourier transform ion cyclotron resonance mass spectrometry
- (2008) Hiroki Takahashi et al. ANALYTICAL AND BIOANALYTICAL CHEMISTRY
- Quantitative metabolome analysis using liquid chromatography–high-resolution mass spectrometry
- (2008) Patrick Kiefer et al. ANALYTICAL BIOCHEMISTRY
- Development and application of a differential method for reliable metabolome analysis in Escherichia coli
- (2008) Hilal Taymaz-Nikerel et al. ANALYTICAL BIOCHEMISTRY
- Global Metabolic Profiling ofEscherichia coliCultures: an Evaluation of Methods for Quenching and Extraction of Intracellular Metabolites
- (2008) Catherine L. Winder et al. ANALYTICAL CHEMISTRY
- Metabolic Phenotyping in Health and Disease
- (2008) Elaine Holmes et al. CELL
- Development of a quantitative, validated Capillary electrophoresis-time of flight – mass spectrometry method with integrated high-confidence analyte identification for metabolomics
- (2008) Birgit Timischl et al. ELECTROPHORESIS
- A combination of metabolome and transcriptome analyses reveals new targets of the Corynebacterium glutamicum nitrogen regulator AmtR
- (2008) Sebastian Buchinger et al. JOURNAL OF BIOTECHNOLOGY
- Analysis of hydrophilic metabolites by high-performance liquid chromatography–mass spectrometry using a silica hydride-based stationary phase
- (2008) Joseph J. Pesek et al. JOURNAL OF CHROMATOGRAPHY A
- Phenotype differentiation of three E. coli strains by GC-FID and GC–MS based metabolomics
- (2008) Jing Tian et al. JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES
- Metabolic profiling of serum using Ultra Performance Liquid Chromatography and the LTQ-Orbitrap mass spectrometry system
- (2008) Warwick B. Dunn et al. JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES
- Mass spectrometry in systems biology: An overview
- (2008) Xiaojun Feng et al. MASS SPECTROMETRY REVIEWS
- Comprehensive analysis of the metabolome of Pseudomonas putida S12 grown on different carbon sources
- (2008) Mariët J. van der Werf et al. Molecular BioSystems
- Absolute quantitation of intracellular metabolite concentrations by an isotope ratio-based approach
- (2008) Bryson D Bennett et al. Nature Protocols
- Reconstruction of biochemical networks in microorganisms
- (2008) Adam M. Feist et al. NATURE REVIEWS MICROBIOLOGY
- Increasing the mass accuracy of high-resolution LC-MS data using background ions - a case study on the LTQ-Orbitrap
- (2008) Richard A. Scheltema et al. PROTEOMICS
- Perceiving molecular evolution processes in Escherichia coli by comprehensive metabolite and gene expression profiling
- (2008) Chandran Vijayendran et al. GENOME BIOLOGY
- New surveyor tools for charting microbial metabolic maps
- (2007) Rainer Breitling et al. NATURE REVIEWS MICROBIOLOGY
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now