标题
Insights into the Human Virome Using CRISPR Spacers from Microbiomes
作者
关键词
-
出版物
Viruses-Basel
Volume 10, Issue 9, Pages 479
出版商
MDPI AG
发表日期
2018-09-07
DOI
10.3390/v10090479
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Insights into the human oral microbiome
- (2018) Digvijay Verma et al. ARCHIVES OF MICROBIOLOGY
- Structural insights into the inactivation of CRISPR-Cas systems by diverse anti-CRISPR proteins
- (2018) Yuwei Zhu et al. BMC BIOLOGY
- Phages of life - the path to pharma
- (2018) Amanda Forde et al. BRITISH JOURNAL OF PHARMACOLOGY
- Gut microbial composition in patients with psoriasis
- (2018) Francisco M. Codoñer et al. Scientific Reports
- Host genetic variation and its microbiome interactions within the Human Microbiome Project
- (2018) Raivo Kolde et al. Genome Medicine
- Biogeography and environmental conditions shape bacteriophage-bacteria networks across the human microbiome
- (2018) Geoffrey D. Hannigan et al. PLoS Computational Biology
- Applications for Bacteriophage Therapy during Pregnancy and the Perinatal Period
- (2018) Lucy L. Furfaro et al. Frontiers in Microbiology
- Skin microbiome before development of atopic dermatitis: Early colonization with commensal staphylococci at 2 months is associated with a lower risk of atopic dermatitis at 1 year
- (2017) Elizabeth A. Kennedy et al. JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY
- Molecular characterization of Salmonella Typhimurium isolated in Brazil by CRISPR-MVLST
- (2017) Fernanda Almeida et al. JOURNAL OF MICROBIOLOGICAL METHODS
- Dynamics of Escherichia coli type I-E CRISPR spacers over 42 000 years
- (2017) Ekaterina Savitskaya et al. MOLECULAR ECOLOGY
- Anti-CRISPR: discovery, mechanism and function
- (2017) April Pawluk et al. NATURE REVIEWS MICROBIOLOGY
- Ménage à trois in the human gut: interactions between host, bacteria and phages
- (2017) Mohammadali Khan Mirzaei et al. NATURE REVIEWS MICROBIOLOGY
- Genetic analysis of Salmonella enterica serovar Gallinarum biovar Pullorum based on characterization and evolution of CRISPR sequence
- (2017) Xiaolei Xie et al. VETERINARY MICROBIOLOGY
- Intestinal Microbiota and Weight-Gain in Preterm Neonates
- (2017) Silvia Arboleya et al. Frontiers in Microbiology
- CRISPR: A Useful Genetic Feature to Follow Vaginal Carriage of Group B Streptococcus
- (2017) Clémence Beauruelle et al. Frontiers in Microbiology
- Characterization and Exploitation of CRISPR Loci in Bifidobacterium longum
- (2017) Claudio Hidalgo-Cantabrana et al. Frontiers in Microbiology
- Maternal inheritance of bifidobacterial communities and bifidophages in infants through vertical transmission
- (2017) Sabrina Duranti et al. Microbiome
- Discovery of an expansive bacteriophage family that includes the most abundant viruses from the human gut
- (2017) Natalya Yutin et al. Nature Microbiology
- Chromosomal Targeting by the Type III-A CRISPR-Cas System Can Reshape Genomes in Staphylococcus aureus
- (2017) Jing Guan et al. mSphere
- The microbiome and atopic eczema: More than skin deep
- (2016) Charlotte L Thomas et al. AUSTRALASIAN JOURNAL OF DERMATOLOGY
- Computational prediction of CRISPR cassettes in gut metagenome samples from Chinese type-2 diabetic patients and healthy controls
- (2016) Tatiana C. Mangericao et al. BMC Systems Biology
- CRISPR Diversity and Microevolution inClostridium difficile
- (2016) Joakim M. Andersen et al. Genome Biology and Evolution
- Requirements for Pseudomonas aeruginosa Type I-F CRISPR-Cas Adaptation Determined Using a Biofilm Enrichment Assay
- (2016) Gary E. Heussler et al. JOURNAL OF BACTERIOLOGY
- Cutaneous microbiome effects of fluticasone propionate cream and adjunctive bleach baths in childhood atopic dermatitis
- (2016) Mercedes E. Gonzalez et al. JOURNAL OF THE AMERICAN ACADEMY OF DERMATOLOGY
- Characterization of CRISPR-Cas system in clinical Staphylococcus epidermidis strains revealed its potential association with bacterial infection sites
- (2016) Qiuchun Li et al. MICROBIOLOGICAL RESEARCH
- Quorum sensing controls thePseudomonas aeruginosaCRISPR-Cas adaptive immune system
- (2016) Nina M. Høyland-Kroghsbo et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Two Novel Myoviruses from the North of Iraq Reveal Insights into Clostridium difficile Phage Diversity and Biology
- (2016) Srwa Rashid et al. Viruses-Basel
- The healthy human microbiome
- (2016) Jason Lloyd-Price et al. Genome Medicine
- Gut Bifidobacteria Populations in Human Health and Aging
- (2016) Silvia Arboleya et al. Frontiers in Microbiology
- An Enrichment of CRISPR and Other Defense-Related Features in Marine Sponge-Associated Microbial Metagenomes
- (2016) Hannes Horn et al. Frontiers in Microbiology
- Whole metagenome profiling reveals skin microbiome-dependent susceptibility to atopic dermatitis flare
- (2016) Kern Rei Chng et al. Nature Microbiology
- Microbial biofilms and the human skin microbiome
- (2016) Michael Brandwein et al. npj Biofilms and Microbiomes
- Genomes of Gardnerella Strains Reveal an Abundance of Prophages within the Bladder Microbiome
- (2016) Kema Malki et al. PLoS One
- The balance of metagenomic elements shapes the skin microbiome in acne and health
- (2016) Emma Barnard et al. Scientific Reports
- Analysis of the features of 45 identified CRISPR loci in 32 Staphylococcus aureus
- (2015) Siyu Yang et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- Dynamics and Stabilization of the Human Gut Microbiome during the First Year of Life
- (2015) Fredrik Bäckhed et al. Cell Host & Microbe
- The diversity and host interactions of Propionibacterium acnes bacteriophages on human skin
- (2015) Jared Liu et al. ISME Journal
- Characterization and evolution of Salmonella CRISPR-Cas systems
- (2015) MICROBIOLOGY-SGM
- Occurrence and activity of a type II CRISPR-Cas system in Lactobacillus gasseri
- (2015) MICROBIOLOGY-SGM
- Early life dynamics of the human gut virome and bacterial microbiome in infants
- (2015) Efrem S Lim et al. NATURE MEDICINE
- CRISPR Diversity in E. coli Isolates from Australian Animals, Humans and Environmental Waters
- (2015) Maxim S. Sheludchenko et al. PLoS One
- Phylogenetic Distribution of CRISPR-Cas Systems in Antibiotic-Resistant Pseudomonas aeruginosa
- (2015) Alex van Belkum et al. mBio
- Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera
- (2015) Zhihong Sun et al. Nature Communications
- Occurrence and Diversity of CRISPR-Cas Systems in the Genus Bifidobacterium
- (2015) Alexandra E. Briner et al. PLoS One
- Comparative analysis of CRISPR cassettes from the human gut metagenomic contigs
- (2014) Anna A Gogleva et al. BMC GENOMICS
- Genome analysis and CRISPR typing of Salmonella enterica serovar Virchow
- (2014) Nathan L Bachmann et al. BMC GENOMICS
- Conservation of streptococcal CRISPRs on human skin and saliva
- (2014) Refugio Robles-Sikisaka et al. BMC MICROBIOLOGY
- Characterization of bacteriophage communities and CRISPR profiles from dental plaque
- (2014) Mayuri Naidu et al. BMC MICROBIOLOGY
- The Integrative Human Microbiome Project: Dynamic Analysis of Microbiome-Host Omics Profiles during Periods of Human Health and Disease
- (2014) Cell Host & Microbe
- CRISPR-Cas Systems: Prokaryotes Upgrade to Adaptive Immunity
- (2014) Rodolphe Barrangou et al. MOLECULAR CELL
- Biogeography and individuality shape function in the human skin metagenome
- (2014) Julia Oh et al. NATURE
- Exploiting CRISPR-Cas nucleases to produce sequence-specific antimicrobials
- (2014) David Bikard et al. NATURE BIOTECHNOLOGY
- Structures of CRISPR Cas3 offer mechanistic insights into Cascade-activated DNA unwinding and degradation
- (2014) Yanwu Huo et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Structures of Cas9 Endonucleases Reveal RNA-Mediated Conformational Activation
- (2014) M. Jinek et al. SCIENCE
- Altered Oral Viral Ecology in Association with Periodontal Disease
- (2014) M. Ly et al. mBio
- Abundant and Diverse Clustered Regularly Interspaced Short Palindromic Repeat Spacers in Clostridium difficile Strains and Prophages Target Multiple Phage Types within This Pathogen
- (2014) K. R. Hargreaves et al. mBio
- A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes
- (2014) Bas E. Dutilh et al. Nature Communications
- The Skin Microbiome: A Focus on Pathogens and Their Association with Skin Disease
- (2014) Keisha Findley et al. PLoS Pathogens
- CRISPR-MVLST subtyping of Salmonella enterica subsp. enterica serovars Typhimurium and Heidelberg and application in identifying outbreak isolates
- (2013) Nikki Shariat et al. BMC MICROBIOLOGY
- Uropathogenic Escherichia coli are less likely than paired fecal E. coli to have CRISPR loci
- (2013) Trang Nguyen Doan Dang et al. INFECTION GENETICS AND EVOLUTION
- Propionibacterium acnes Strain Populations in the Human Skin Microbiome Associated with Acne
- (2013) Sorel Fitz-Gibbon et al. JOURNAL OF INVESTIGATIVE DERMATOLOGY
- A bacteriophage encodes its own CRISPR/Cas adaptive response to evade host innate immunity
- (2013) Kimberley D. Seed et al. NATURE
- Rapid evolution of the human gut virome
- (2013) S. Minot et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The tracrRNA and Cas9 families of type II CRISPR-Cas immunity systems
- (2013) Krzysztof Chylinski et al. RNA Biology
- Structure and function of the human skin microbiome
- (2013) Nina N. Schommer et al. TRENDS IN MICROBIOLOGY
- CRISPR-Cas systems target a diverse collection of invasive mobile genetic elements in human microbiomes
- (2013) Quan Zhang et al. GENOME BIOLOGY
- Insights into the CRISPR/Cas system of Gardnerella vaginalis
- (2012) Milda Pleckaityte et al. BMC MICROBIOLOGY
- CRISPR targeting reveals a reservoir of common phages associated with the human gut microbiome
- (2012) A. Stern et al. GENOME RESEARCH
- The CRISPR/Cas Adaptive Immune System of Pseudomonas aeruginosa Mediates Resistance to Naturally Occurring and Engineered Phages
- (2012) K. C. Cady et al. JOURNAL OF BACTERIOLOGY
- Human gut microbiome viewed across age and geography
- (2012) Tanya Yatsunenko et al. NATURE
- CRISPR/cas Loci of Type II Propionibacterium acnes Confer Immunity against Acquisition of Mobile Elements Present in Type I P. acnes
- (2012) Holger Brüggemann et al. PLoS One
- A Metagenomic Approach to Characterization of the Vaginal Microbiome Signature in Pregnancy
- (2012) Kjersti Aagaard et al. PLoS One
- A Programmable Dual-RNA-Guided DNA Endonuclease in Adaptive Bacterial Immunity
- (2012) M. Jinek et al. SCIENCE
- Diverse CRISPRs Evolving in Human Microbiomes
- (2012) Mina Rho et al. PLoS Genetics
- Composition of the adult digestive tract bacterial microbiome based on seven mouth surfaces, tonsils, throat and stool samples
- (2012) Nicola Segata et al. GENOME BIOLOGY
- The human gut virome: Inter-individual variation and dynamic response to diet
- (2011) S. Minot et al. GENOME RESEARCH
- Evidence of a robust resident bacteriophage population revealed through analysis of the human salivary virome
- (2011) David T Pride et al. ISME Journal
- CRISPR Distribution within the Escherichia coli Species Is Not Suggestive of Immunity-Associated Diversifying Selection
- (2011) M. Touchon et al. JOURNAL OF BACTERIOLOGY
- The skin microbiome
- (2011) Elizabeth A. Grice et al. NATURE REVIEWS MICROBIOLOGY
- Analysis of streptococcal CRISPRs from human saliva reveals substantial sequence diversity within and between subjects over time
- (2010) D. T. Pride et al. GENOME RESEARCH
- Diversity of CRISPR loci in Escherichia coli
- (2010) MICROBIOLOGY-SGM
- Viruses in the faecal microbiota of monozygotic twins and their mothers
- (2010) Alejandro Reyes et al. NATURE
- Comparative Analyses of Prophage-Like Elements Present in Bifidobacterial Genomes
- (2009) M. Ventura et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Diversity of Prophages in Dominant Staphylococcus aureus Clonal Lineages
- (2009) C. Goerke et al. JOURNAL OF BACTERIOLOGY
- Short motif sequences determine the targets of the prokaryotic CRISPR defence system
- (2009) MICROBIOLOGY-SGM
- Interaction between Bacteriophage DMS3 and Host CRISPR Region Inhibits Group Behaviors of Pseudomonas aeruginosa
- (2008) M. E. Zegans et al. JOURNAL OF BACTERIOLOGY
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started