Insights into the human oral microbiome

Characterisation of the human oral microbiome in patients with coronary artery disease using next-generation sequencing of 16SrRNA amplicons

(2017) Thangam Menon et al.   Indian Journal of Medical Microbiology

A tale of two risks: smoking, diabetes and the subgingival microbiome

(2017) Sukirth M Ganesan et al.   ISME Journal

Association of oral microbiome with type 2 diabetes risk

(2017) J. Long et al.   JOURNAL OF PERIODONTAL RESEARCH

Oral Microbiome: A New Biomarker Reservoir for Oral and Oropharyngeal Cancers

(2017) Yenkai Lim et al.   Theranostics

Characterization of oral and gut microbiome temporal variability in hospitalized cancer patients

(2017) Jessica R. Galloway-Peña et al.   Genome Medicine

Temporal Variations in Cigarette Tobacco Bacterial Community Composition and Tobacco-Specific Nitrosamine Content Are Influenced by Brand and Storage Conditions

(2017) Jessica Chopyk et al.   Frontiers in Microbiology

Candida albicans alters the bacterial microbiome of early in vitro oral biofilms

(2017) M. M. Janus et al.   Journal of Oral Microbiology

Inflammatory bacteriome featuring Fusobacterium nucleatum and Pseudomonas aeruginosa identified in association with oral squamous cell carcinoma

(2017) Nezar Noor Al-hebshi et al.   Scientific Reports

Ecological Effect of Arginine on Oral Microbiota

(2017) Xin Zheng et al.   Scientific Reports

Microbiome therapeutics — Advances and challenges

(2016) Mark Mimee et al.   ADVANCED DRUG DELIVERY REVIEWS

Probing the diversity of healthy oral microbiome with bioinformatics approaches

(2016) Ji-Hoi Moon et al.   BMB Reports

Sensitivity and correlation of hypervariable regions in 16S rRNA genes in phylogenetic analysis

(2016) Bo Yang et al.   BMC BIOINFORMATICS

Phylogenetic and comparative genomics of the family Leptotrichiaceae and introduction of a novel fingerprinting MLVA for Streptobacillus moniliformis

(2016) Tobias Eisenberg et al.   BMC GENOMICS

The oral microbiome – an update for oral healthcare professionals

(2016) M. Kilian et al.   BRITISH DENTAL JOURNAL

High Throughput Sequencing: An Overview of Sequencing Chemistry

(2016) Sheetal Ambardar et al.   INDIAN JOURNAL OF MICROBIOLOGY

Cigarette smoking and the oral microbiome in a large study of American adults

(2016) Jing Wu et al.   ISME Journal

Biofilms: an emergent form of bacterial life

(2016) Hans-Curt Flemming et al.   NATURE REVIEWS MICROBIOLOGY

A practical guide to the oral microbiome and its relation to health and disease

(2016) K Krishnan et al.   ORAL DISEASES

Biogeography of a human oral microbiome at the micron scale

(2016) Jessica L. Mark Welch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Revised Estimates for the Number of Human and Bacteria Cells in the Body

(2016) Ron Sender et al.   PLOS BIOLOGY

Dysbiosis May Trigger Autoimmune Diseases via Inappropriate Post-Translational Modification of Host Proteins

(2016) Aaron Lerner et al.   Frontiers in Microbiology

Metabolic and Community Synergy of Oral Bacteria in Colorectal Cancer

(2016) Kaitlin J. Flynn et al.   mSphere

An Improved Methodology to Overcome Key Issues in Human Fecal Metagenomic DNA Extraction

(2016) Jitendra Kumar et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Bacterial diversity in saliva and oral health-related conditions: the Hisayama Study

(2016) Toru Takeshita et al.   Scientific Reports

Microbiota-based Signature of Gingivitis Treatments: A Randomized Study

(2016) Shi Huang et al.   Scientific Reports

Improvement of oral health-related quality-of-life by use of different kinds of double-crown-retained removable partial dentures

(2015) Thomas Stober et al.   ACTA ODONTOLOGICA SCANDINAVICA

CS-SCORE: Rapid identification and removal of human genome contaminants from metagenomic datasets

(2015) Mohammed Monzoorul Haque et al.   GENOMICS

The oral microbiome in human immunodeficiency virus (HIV)-positive individuals

(2015) James O. Kistler et al.   JOURNAL OF MEDICAL MICROBIOLOGY

Filifactor alocis – a new emerging periodontal pathogen

(2015) A. Wilson Aruni et al.   MICROBES AND INFECTION

Fusobacterium nucleatum, inflammation, and immunity: the fire within human gut

(2015) Arif Bashir et al.   TUMOR BIOLOGY

Comparative analysis of the human saliva microbiome from different climate zones: Alaska, Germany, and Africa

(2014) Jing Li et al.   BMC MICROBIOLOGY

Human Genetics Shape the Gut Microbiome

(2014) Julia K. Goodrich et al.   CELL

The oral microbiome diversity and its relation to human diseases

(2014) Jinzhi He et al.   FOLIA MICROBIOLOGICA

The oral microbiome and the immunobiology of periodontal disease and caries

(2014) Massimo Costalonga et al.   IMMUNOLOGY LETTERS

The subgingival microbiome of clinically healthy current and never smokers

(2014) Matthew R Mason et al.   ISME Journal

The microbiome revolution

(2014) Martin J. Blaser   JOURNAL OF CLINICAL INVESTIGATION

Pyrosequencing Analysis of Oral Microbiota Shifting in Various Caries States in Childhood

(2014) Wen Jiang et al.   MICROBIAL ECOLOGY

Plaque Bacterial Microbiome Diversity in Children Younger than 30 Months with or without Caries Prior to Eruption of Second Primary Molars

(2014) He Xu et al.   PLoS One

Changes in Abundance of Oral Microbiota Associated with Oral Cancer

(2014) Brian L. Schmidt et al.   PLoS One

Microbial Community Profiling of Human Saliva Using Shotgun Metagenomic Sequencing

(2014) Nur A. Hasan et al.   PLoS One

Metatranscriptomics of the Human Oral Microbiome during Health and Disease

(2014) P. Jorth et al.   mBio

The Human Mycobiome

(2014) P. C. Seed   Cold Spring Harbor Perspectives in Medicine

Oral Bacteria and Cancer

(2014) Sarah E. Whitmore et al.   PLoS Pathogens

An estimation of the number of cells in the human body

(2013) Eva Bianconi et al.   ANNALS OF HUMAN BIOLOGY

Oral Bacterial Communities in Individuals with Type 2 Diabetes Who Live in Southern Thailand

(2013) Kanokporn Kampoo et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Salivary Biomarkers: Toward Future Clinical and Diagnostic Utilities

(2013) J. M. Yoshizawa et al.   CLINICAL MICROBIOLOGY REVIEWS

Streptococcus mutans: a new Gram-positive paradigm?

(2013) J. A. Lemos et al.   MICROBIOLOGY-SGM

Medicines from microbiota

(2013) Bernat Olle   NATURE BIOTECHNOLOGY

Duodenal Infusion of Donor Feces for Recurrent Clostridium difficile

(2013) Els van Nood et al.   NEW ENGLAND JOURNAL OF MEDICINE

Composition and development of oral bacterial communities

(2013) Robert J. Palmer Jr   PERIODONTOLOGY 2000

Effect of DNA Extraction Methods and Sampling Techniques on the Apparent Structure of Cow and Sheep Rumen Microbial Communities

(2013) Gemma Henderson et al.   PLoS One

A Method for Selectively Enriching Microbial DNA from Contaminating Vertebrate Host DNA

(2013) George R. Feehery et al.   PLoS One

Comparison of oral microbiota in tumor and non-tumor tissues of patients with oral squamous cell carcinoma

(2012) Smruti Pushalkar et al.   BMC MICROBIOLOGY

Oral microbiome and oral and gastrointestinal cancer risk

(2012) Jiyoung Ahn et al.   CANCER CAUSES & CONTROL

Identifying a healthy oral microbiome through metagenomics

(2012) L.D. Alcaraz et al.   CLINICAL MICROBIOLOGY AND INFECTION

Fretibacterium fastidiosum gen. nov., sp. nov., isolated from the human oral cavity

(2012) S. R. Vartoukian et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

The oral microbiome in health and disease

(2012) William G. Wade   PHARMACOLOGICAL RESEARCH

Deep Sequencing of the Oral Microbiome Reveals Signatures of Periodontal Disease

(2012) Bo Liu et al.   PLoS One

Osteopontin Reduces Biofilm Formation in a Multi-Species Model of Dental Biofilm

(2012) Sebastian Schlafer et al.   PLoS One

Pyrosequencing as a tool for better understanding of human microbiomes

(2012) José F. Siqueira et al.   Journal of Oral Microbiology

Cigarette Smoke, Bacteria, Mold, Microbial Toxins, and Chronic Lung Inflammation

(2012) John L. Pauly et al.   Journal of Oncology

Quality control and preprocessing of metagenomic datasets

(2011) R. Schmieder et al.   BIOINFORMATICS

Exploring the oral microbiota of children at various developmental stages of their dentition in the relation to their oral health

(2011) Wim Crielaard et al.   BMC Medical Genomics

Beyond the Venn diagram: the hunt for a core microbiome

(2011) Ashley Shade et al.   ENVIRONMENTAL MICROBIOLOGY

Distinct and complex bacterial profiles in human periodontitis and health revealed by 16S pyrosequencing

(2011) Ann L Griffen et al.   ISME Journal

The oral metagenome in health and disease

(2011) Pedro Belda-Ferre et al.   ISME Journal

Selective removal of human DNA from metagenomic DNA samples extracted from dental plaque

(2011) Stephanie J. Hunter et al.   JOURNAL OF BASIC MICROBIOLOGY

Exploring Bacterial Diversity of Endodontic Microbiota by Cloning and Sequencing 16S rRNA

(2011) Adriana C. Ribeiro et al.   JOURNAL OF ENDODONTICS

Adherence to Streptococci Facilitates Fusobacterium nucleatum Integration into an Oral Microbial Community

(2011) Xuesong He et al.   MICROBIAL ECOLOGY

Target Region Selection Is a Critical Determinant of Community Fingerprints Generated by 16S Pyrosequencing

(2011) Purnima S. Kumar et al.   PLoS One

CORE: A Phylogenetically-Curated 16S rDNA Database of the Core Oral Microbiome

(2011) Ann L. Griffen et al.   PLoS One

Diabetes, periodontitis, and the subgingival microbiota

(2011) Edward J. Ohlrich et al.   Journal of Oral Microbiology

Cultivation of a Synergistetes strain representing a previously uncultivated lineage

(2010) S. R. Vartoukian et al.   ENVIRONMENTAL MICROBIOLOGY

Acid tolerance mechanisms utilized byStreptococcus mutans

(2010) Robert Matsui et al.   Future Microbiology

Bacterial diversity in the oral cavity of 10 healthy individuals

(2010) Elisabeth M Bik et al.   ISME Journal

Central Role of the Early Colonizer Veillonella sp. in Establishing Multispecies Biofilm Communities with Initial, Middle, and Late Colonizers of Enamel

(2010) S. Periasamy et al.   JOURNAL OF BACTERIOLOGY

The Human Oral Microbiome

(2010) F. E. Dewhirst et al.   JOURNAL OF BACTERIOLOGY

Bacterial 16S Sequence Analysis of Severe Caries in Young Permanent Teeth

(2010) E. L. Gross et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Virulence Factors of the Oral Spirochete Treponema denticola

(2010) S.G. Dashper et al.   JOURNAL OF DENTAL RESEARCH

Analysis of Oral Microbiota in Children with Dental Caries by PCR-DGGE and Barcoded Pyrosequencing

(2010) Zongxin Ling et al.   MICROBIAL ECOLOGY

The bacterial microbiota in the oral mucosa of rural Amerindians

(2010) M. Contreras et al.   MICROBIOLOGY-SGM

Community and gene composition of a human dental plaque microbiota obtained by metagenomic sequencing

(2010) G. Xie et al.   Molecular Oral Microbiology

The road to ruin: the formation of disease-associated oral biofilms

(2010) NS Jakubovics et al.   ORAL DISEASES

Oral cancer: Clinical features

(2010) Jose Bagan et al.   ORAL ONCOLOGY

Oral Biofilm Architecture on Natural Teeth

(2010) Vincent Zijnge et al.   PLoS One

The Human Oral Microbiome Database: a web accessible resource for investigating oral microbe taxonomic and genomic information

(2010) T. Chen et al.   Database-The Journal of Biological Databases and Curation

Characterization of the Oral Fungal Microbiome (Mycobiome) in Healthy Individuals

(2010) Mahmoud A. Ghannoum et al.   PLoS Pathogens

Diversity and Morphology of Members of the Phylum "Synergistetes" in Periodontal Health and Disease

(2009) S. R. Vartoukian et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Defining the healthy "core microbiome" of oral microbial communities

(2009) Egija Zaura et al.   BMC MICROBIOLOGY

The Isolation of Bifidobacteria from Occlusal Carious Lesions in Children and Adults

(2009) M. Mantzourani et al.   CARIES RESEARCH

Microbiology of Odontogenic Bacteremia: beyond Endocarditis

(2009) N. B. Parahitiyawa et al.   CLINICAL MICROBIOLOGY REVIEWS

Human Pathogens Abundant in the Bacterial Metagenome of Cigarettes

(2009) Amy R. Sapkota et al.   ENVIRONMENTAL HEALTH PERSPECTIVES

Pyramidobacter piscolens gen. nov., sp. nov., a member of the phylum 'Synergistetes' isolated from the human oral cavity

(2009) J. Downes et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Description of 'Synergistetes' phyl. nov. and emended description of the phylum 'Deferribacteres' and of the family Syntrophomonadaceae, phylum 'Firmicutes'

(2009) E. Jumas-Bilak et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Pyrosequencing analysis of the Oral Microflora of healthy adults

(2009) B.J.F. Keijser et al.   JOURNAL OF DENTAL RESEARCH

The microbiology of the acute dental abscess

(2009) D. Robertson et al.   JOURNAL OF MEDICAL MICROBIOLOGY

Human DNA methylomes at base resolution show widespread epigenomic differences

(2009) Ryan Lister et al.   NATURE

Oral squamous cell carcinoma: overview of current understanding of aetiopathogenesis and clinical implications

(2009) C Scully et al.   ORAL DISEASES

Fusobacterium nucleatumenhances invasion of human gingival epithelial and aortic endothelial cells byPorphyromonas gingivalis

(2008) Atsushi Saito et al.   FEMS IMMUNOLOGY AND MEDICAL MICROBIOLOGY

Regulation of Gene Expression in a Mixed-Genus Community: Stabilized Arginine Biosynthesis in Streptococcus gordonii by Coaggregation with Actinomyces naeslundii

(2008) N. S. Jakubovics et al.   JOURNAL OF BACTERIOLOGY

TheFusobacterium nucleatumouter membrane protein RadD is an arginine-inhibitable adhesin required for inter-species adherence and the structured architecture of multispecies biofilm

(2008) Christopher W. Kaplan et al.   MOLECULAR MICROBIOLOGY

Microbiological diversity of generalized aggressive periodontitis by 16S rRNA clonal analysis

(2008) M. Faveri et al.   Oral microbiology and immunology

Molecular analysis of the root canal microbiota associated with endodontic treatment failures

(2008) M. Sakamoto et al.   Oral microbiology and immunology

Association betweenBifidobacteriaceaeand the clinical severity of root caries lesions

(2008) M. Mantzourani et al.   Oral microbiology and immunology