Metabolic functions of Pseudomonas fluorescens strains from Populus deltoides depend on rhizosphere or endosphere isolation compartment

Plant hormone cross-talk: the pivot of root growth

(2015) Elena Pacifici et al.   JOURNAL OF EXPERIMENTAL BOTANY

Bacteria and fungi controlling plant growth by manipulating auxin: Balance between development and defense

(2015) Jutta Ludwig-Müller   JOURNAL OF PLANT PHYSIOLOGY

BrassicaSeed Meal Soil Amendments Transform the Rhizosphere Microbiome and Improve Apple Production Through Resistance to Pathogen Reinfestation

(2015) Mark Mazzola et al.   PHYTOPATHOLOGY

The Effect of Phylogenetically Different Bacteria on the Fitness of Pseudomonas fluorescens in Sand Microcosms

(2015) Olaf Tyc et al.   PLoS One

What lies beneath: belowground defense strategies in plants

(2015) Barbara De Coninck et al.   TRENDS IN PLANT SCIENCE

Ralstonia solanacearum Uses Inorganic Nitrogen Metabolism for Virulence, ATP Production, and Detoxification in the Oxygen-Limited Host Xylem Environment

(2015) Beth L. Dalsing et al.   mBio

Transcriptional Responses to Sucrose Mimic the Plant-Associated Life Style of the Plant Growth Promoting Endophyte Enterobacter sp. 638

(2015) Safiyh Taghavi et al.   PLoS One

Evaluation and validation of de novo and hybrid assembly techniques to derive high-quality genome sequences

(2014) Sagar M. Utturkar et al.   BIOINFORMATICS

Populus deltoides females are more selective in nitrogen assimilation than males under different nitrogen forms supply

(2014) Junyu Li et al.   TREES-STRUCTURE AND FUNCTION

Root traits and microbial community interactions in relation to phosphorus availability and acquisition, with particular reference to Brassica

(2014) Paul J. Hunter et al.   Frontiers in Plant Science

Inside the root microbiome: Bacterial root endophytes and plant growth promotion

(2013) Jonathan R. Gaiero et al.   AMERICAN JOURNAL OF BOTANY

Structure and Functions of the Bacterial Microbiota of Plants

(2013) Davide Bulgarelli et al.   Annual Review of Plant Biology

The role of auxin in shaping shoot architecture

(2013) Andrea Gallavotti   JOURNAL OF EXPERIMENTAL BOTANY

Speak, friend and enter: signalling systems that promote beneficial symbiotic associations in plants

(2013) Giles E. D. Oldroyd   NATURE REVIEWS MICROBIOLOGY

Modelling root–soil interactions using three–dimensional models of root growth, architecture and function

(2013) Vanessa M. Dunbabin et al.   PLANT AND SOIL

Linking Plant Nutritional Status to Plant-Microbe Interactions

(2013) Lilia C. Carvalhais et al.   PLoS One

A Multifactor Analysis of Fungal and Bacterial Community Structure in the Root Microbiome of Mature Populus deltoides Trees

(2013) Migun Shakya et al.   PLoS One

Genome-scale metabolic reconstructions of multiple Escherichia coli strains highlight strain-specific adaptations to nutritional environments

(2013) J. M. Monk et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phosphate solubilization of Paenibacillus polymyxa and Paenibacillus macerans from mycorrhizal and non-mycorrhizal cucumber plants

(2012) Yanli Wang   African Journal of Microbiology Research

Is l-arabinose important for the endophytic lifestyle of Pseudomonas spp.?

(2012) Natalia Malfanova et al.   ARCHIVES OF MICROBIOLOGY

Aerobic degradation of aromatic compounds

(2012) Eduardo Díaz et al.   CURRENT OPINION IN BIOTECHNOLOGY

Analysis of the plant growth-promoting properties encoded by the genome of the rhizobacteriumPseudomonas putida BIRD-1

(2012) Amalia Roca et al.   ENVIRONMENTAL MICROBIOLOGY

Degradation of 2,3-Dihydroxybenzoate by a Novel meta-Cleavage Pathway

(2012) M. Marin et al.   JOURNAL OF BACTERIOLOGY

Twenty-One Genome Sequences from Pseudomonas Species and 19 Genome Sequences from Diverse Bacteria Isolated from the Rhizosphere and Endosphere of Populus deltoides

(2012) S. D. Brown et al.   JOURNAL OF BACTERIOLOGY

Effects of Bacterial ACC Deaminase on Brassica napus Gene Expression

(2012) Jennifer C. Stearns et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Pseudomonas fluorescensInduces Strain-Dependent and Strain-Independent Host Plant Responses in Defense Networks, Primary Metabolism, Photosynthesis, and Fitness

(2012) David J. Weston et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Biological nitrogen fixation and phosphate solubilization by bacteria isolated from tropical soils

(2012) Leandro Marciano Marra et al.   PLANT AND SOIL

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Modeling Phosphorus Uptake by a Growing and Exuding Root System

(2012) A. Schnepf et al.   VADOSE ZONE JOURNAL

Comparative Genomics of Plant-Associated Pseudomonas spp.: Insights into Diversity and Inheritance of Traits Involved in Multitrophic Interactions

(2012) Joyce E. Loper et al.   PLoS Genetics

Distinct Microbial Communities within the Endosphere and Rhizosphere of Populus deltoides Roots across Contrasting Soil Types

(2011) Neil R. Gottel et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Plant protection and growth stimulation by microorganisms: biotechnological applications of Bacilli in agriculture

(2011) Alejandro Pérez-García et al.   CURRENT OPINION IN BIOTECHNOLOGY

Genotypic variation in aluminum resistance, cellular aluminum fractions, callose and pectin formation and organic acid accumulation in roots of Populus hybrids

(2011) Ernest Smith et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Extreme genome reduction in symbiotic bacteria

(2011) John P. McCutcheon et al.   NATURE REVIEWS MICROBIOLOGY

Structure and Evolution of Streptomyces Interaction Networks in Soil and In Silico

(2011) Kalin Vetsigian et al.   PLOS BIOLOGY

PhyloChip hybridization uncovered an enormous bacterial diversity in the rhizosphere of different potato cultivars: many common and few cultivar-dependent taxa

(2010) Nicole Weinert et al.   FEMS MICROBIOLOGY ECOLOGY

Root exudation of sugars, amino acids, and organic acids by maize as affected by nitrogen, phosphorus, potassium, and iron deficiency

(2010) Lilia C. Carvalhais et al.   JOURNAL OF PLANT NUTRITION AND SOIL SCIENCE

Unravelling the gallic acid degradation pathway in bacteria: the gal cluster from Pseudomonas putida

(2010) Juan Nogales et al.   MOLECULAR MICROBIOLOGY

Pyrosequencing reveals a contrasted bacterial diversity between oak rhizosphere and surrounding soil

(2010) Stéphane Uroz et al.   Environmental Microbiology Reports

Organic acid production in vitro and plant growth promotion in maize under controlled environment by phosphate-solubilizing fluorescent Pseudomonas

(2009) Pratibha Vyas et al.   BMC MICROBIOLOGY

Genomics of Secondary Metabolism inPopulus: Interactions with Biotic and Abiotic Environments

(2009) Feng Chen et al.   CRITICAL REVIEWS IN PLANT SCIENCES

Phosphate solubilization by Rhizobium strains

(2009) M. Sridevi et al.   INDIAN JOURNAL OF MICROBIOLOGY

Recent advances and emerging trends in plant hormone signalling

(2009) Aaron Santner et al.   NATURE

Soil properties are key determinants for the development of exudate gradients in a rhizosphere simulation model

(2009) Xavier Raynaud   SOIL BIOLOGY & BIOCHEMISTRY

Plant growth-promoting bacteria in the rhizo- and endosphere of plants: Their role, colonization, mechanisms involved and prospects for utilization

(2009) Stéphane Compant et al.   SOIL BIOLOGY & BIOCHEMISTRY

Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens

(2009) Mark W Silby et al.   GENOME BIOLOGY

Genome Survey and Characterization of Endophytic Bacteria Exhibiting a Beneficial Effect on Growth and Development of Poplar Trees

(2008) S. Taghavi et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Regulation of ferulic catabolic genes in Pseudomonas fluorescens BF13: involvement of a MarR family regulator

(2008) C. Calisti et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Discovery of a bacterial gene cluster for catabolism of the plant hormone indole 3-acetic acid

(2008) Johan H.J. Leveau et al.   FEMS MICROBIOLOGY ECOLOGY

Selective progressive response of soil microbial community to wild oat roots

(2008) Kristen M DeAngelis et al.   ISME Journal

Plant-driven selection of microbes

(2008) Anton Hartmann et al.   PLANT AND SOIL