Inside the root microbiome: Bacterial root endophytes and plant growth promotion

Structure and Functions of the Bacterial Microbiota of Plants

(2013) Davide Bulgarelli et al.   Annual Review of Plant Biology

Genetically modified Bt maize lines containing cry3Bb1, cry1A105 or cry1Ab2 do not affect the structure and functioning of root-associated endophyte communities

(2012) Michaela Prischl et al.   APPLIED SOIL ECOLOGY

Transcriptomic analysis of responses to exudates reveal genes required for rhizosphere competence of the endophyteAzoarcussp. strain BH72

(2012) Teja Shidore et al.   ENVIRONMENTAL MICROBIOLOGY

Endophytic bacterial communities in three arctic plants from low arctic fell tundra are cold-adapted and host-plant specific

(2012) Riitta M. Nissinen et al.   FEMS MICROBIOLOGY ECOLOGY

Genomic comparison of the endophyte Herbaspirillum seropedicaeSmR1 and the phytopathogen Herbaspirillum rubrisubalbicansM1 by suppressive subtractive hybridization and partial genome sequencing

(2012) Rose A. Monteiro et al.   FEMS MICROBIOLOGY ECOLOGY

Growing Unculturable Bacteria

(2012) E. J. Stewart   JOURNAL OF BACTERIOLOGY

Hcp2, a Secreted Protein of the Phytopathogen Pseudomonas syringae pv. Tomato DC3000, Is Required for Fitness for Competition against Bacteria and Yeasts

(2012) Minna Haapalainen et al.   JOURNAL OF BACTERIOLOGY

A Bacterial–Fungal Metaproteomic Analysis Enlightens an Intriguing Multicomponent Interaction in the Rhizosphere of Lactuca sativa

(2012) Marino Moretti et al.   JOURNAL OF PROTEOME RESEARCH

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota

(2012) Davide Bulgarelli et al.   NATURE

Drought-tolerant endophytic actinobacteria promote growth of wheat (Triticum aestivum) under water stress conditions

(2012) Mahesh S. Yandigeri et al.   PLANT GROWTH REGULATION

Environmental Factors Affecting the Expression of pilAB as Well as the Proteome and Transcriptome of the Grass Endophyte Azoarcus sp. Strain BH72

(2012) Lena Hauberg-Lotte et al.   PLoS One

Methylobacterium-Induced Endophyte Community Changes Correspond with Protection of Plants against Pathogen Attack

(2012) Pavlo Ardanov et al.   PLoS One

The rhizosphere microbiome and plant health

(2012) Roeland L. Berendsen et al.   TRENDS IN PLANT SCIENCE

Distinct Microbial Communities within the Endosphere and Rhizosphere of Populus deltoides Roots across Contrasting Soil Types

(2011) Neil R. Gottel et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Functional genomics analysis of plant growth-promoting rhizobacterial traits involved in rhizosphere competence

(2011) Matthieu Barret et al.   BIOLOGY AND FERTILITY OF SOILS

Symbiosis specificity in the legume - rhizobial mutualism

(2011) Dong Wang et al.   CELLULAR MICROBIOLOGY

Living inside plants: bacterial endophytes

(2011) Barbara Reinhold-Hurek et al.   CURRENT OPINION IN PLANT BIOLOGY

DNA-, rRNA- and mRNA-based stable isotope probing of aerobic methanotrophs in lake sediment

(2011) Marc G. Dumont et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial communities within the rhizosphere and roots of vetiver (Chrysopogon zizanioides (L.) Roberty) sampled at different growth stages

(2011) Juliana M. Monteiro et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Biogeography of symbiotic and other endophytic bacteria isolated from medicinal Glycyrrhiza species in China

(2011) Li Li et al.   FEMS MICROBIOLOGY ECOLOGY

Diversity of endophytic bacteria within nodules of the Sphaerophysa salsula in different regions of Loess Plateau in China

(2011) Zhen Shan Deng et al.   FEMS MICROBIOLOGY ECOLOGY

Rice root-associated bacteria: insights into community structures across 10 cultivars

(2011) Pablo Rodrigo Hardoim et al.   FEMS MICROBIOLOGY ECOLOGY

Sharing of quorum-sensing signals and role of interspecies communities in a bacterial plant disease

(2011) Taha Hosni et al.   ISME Journal

Processing the Interspecies Quorum-sensing Signal Autoinducer-2 (AI-2)

(2011) João C. Marques et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Functional Characteristics of an Endophyte Community Colonizing Rice Roots as Revealed by Metagenomic Analysis

(2011) A. Sessitsch et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Isolation and characterization of root-associated bacteria from agricultural crops in the Kavango region of Namibia

(2011) Jann Lasse Grönemeyer et al.   PLANT AND SOIL

Conservation and Diversity of Seed Associated Endophytes in Zea across Boundaries of Evolution, Ethnography and Ecology

(2011) David Johnston-Monje et al.   PLoS One

Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria

(2011) R. Mendes et al.   SCIENCE

Strategies for bacterial tagging and gene expression in plant-host colonization studies

(2011) Humberto J.O. Ramos et al.   SOIL BIOLOGY & BIOCHEMISTRY

Current molecular biologic techniques for characterizing environmental microbial community

(2011) Dawen Gao et al.   Frontiers of Environmental Science & Engineering

Effect of bacterial inoculation, plant genotype and developmental stage on root-associated and endophytic bacterial communities in potato (Solanum tuberosum)

(2010) Fernando Dini Andreote et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Huanglongbing, a Systemic Disease, Restructures the Bacterial Community Associated with Citrus Roots

(2010) P. Trivedi et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Biodiversity, bioactive natural products and biotechnological potential of plant-associated endophytic actinobacteria

(2010) Sheng Qin et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Temporal dynamics and genetic diversity of chemotactic-competent microbial populations in the rhizosphere

(2010) Alison Buchan et al.   ENVIRONMENTAL MICROBIOLOGY

Soil type affects plant colonization, activity and catabolic gene expression of inoculated bacterial strains during phytoremediation of diesel

(2010) Muhammad Afzal et al.   JOURNAL OF HAZARDOUS MATERIALS

Pyrosequencing Reveals a Highly Diverse and Cultivar-Specific Bacterial Endophyte Community in Potato Roots

(2010) Daniel K. Manter et al.   MICROBIAL ECOLOGY

Quantitative Proteomic Analysis of the Interaction Between the Endophytic Plant-Growth-Promoting BacteriumGluconacetobacter diazotrophicusand Sugarcane

(2010) Letícia M. S. Lery et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Proteomic analysis of rice seedlings infected by Sinorhizobium meliloti 1021

(2010) Feng Chi et al.   PROTEOMICS

Proteomic studies of plant–bacterial interactions

(2010) Zhenyu Cheng et al.   SOIL BIOLOGY & BIOCHEMISTRY

Endophytic Colonization of Potato (Solanum tuberosum L.) by a Novel Competent Bacterial Endophyte, Pseudomonas putida Strain P9, and Its Effect on Associated Bacterial Communities

(2009) F. D. Andreote et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Endophytic colonization of Vitis vinifera L. by Burkholderia phytofirmans strain PsJN: from the rhizosphere to inflorescence tissues

(2009) Stéphane Compant et al.   FEMS MICROBIOLOGY ECOLOGY

Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere

(2009) Gabriele Berg et al.   FEMS MICROBIOLOGY ECOLOGY

The structure of the culturable root bacterial endophyte community of Nicotiana attenuata is organized by soil composition and host plant ethylene production and perception

(2009) Hoang Hoa Long et al.   NEW PHYTOLOGIST

Environmental and spatial characterisation of bacterial community composition in soil to inform sampling strategies

(2009) Kate L. Baker et al.   SOIL BIOLOGY & BIOCHEMISTRY

Plant growth-promoting bacteria in the rhizo- and endosphere of plants: Their role, colonization, mechanisms involved and prospects for utilization

(2009) Stéphane Compant et al.   SOIL BIOLOGY & BIOCHEMISTRY

Genome Survey and Characterization of Endophytic Bacteria Exhibiting a Beneficial Effect on Growth and Development of Poplar Trees

(2008) S. Taghavi et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Effects of plant genotype and growth stage on the structure of bacterial communities associated with potato (Solanum tuberosum L.)

(2008) Leo Van Overbeek et al.   FEMS MICROBIOLOGY ECOLOGY

Endophytic bacterial flora in root and stem tissues of black pepper (Piper nigrumL.) genotype: isolation, identification and evaluation againstPhytophthora capsici

(2008) R. Aravind et al.   LETTERS IN APPLIED MICROBIOLOGY

DNA-based stable isotope probing enables the identification of active bacterial endophytes in potatoes

(2008) Frank Rasche et al.   NEW PHYTOLOGIST

Molecular communication in the rhizosphere

(2008) Denis Faure et al.   PLANT AND SOIL

Ubiquitous presence of normally non-culturable endophytic bacteria in field shoot-tips of banana and their gradual activation to quiescent cultivable form in tissue cultures

(2008) Pious Thomas et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Root-Secreted Malic Acid Recruits Beneficial Soil Bacteria

(2008) T. Rudrappa et al.   PLANT PHYSIOLOGY

Properties of bacterial endophytes and their proposed role in plant growth

(2008) Pablo R. Hardoim et al.   TRENDS IN MICROBIOLOGY

Pseudomonads: major antagonistic endophytic bacteria to suppress bacterial wilt pathogen, Ralstonia solanacearum in the eggplant (Solanum melongena L.)

(2008) R. Ramesh et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY