Analysis of the Skin Transcriptome in Two Oujiang Color Varieties of Common Carp

Deep sequencing for de novo construction of a marine fish (Sparus aurata) transcriptome database with a large coverage of protein-coding transcripts

(2013) Josep A Calduch-Giner et al.   BMC GENOMICS

Transcriptome Analysis of Crucian Carp (Carassius auratus), an Important Aquaculture and Hypoxia-Tolerant Species

(2013) Xiaolin Liao et al.   PLoS One

RNA-seq analysis of mucosal immune responses reveals signatures of intestinal barrier disruption and pathogen entry following Edwardsiella ictaluri infection in channel catfish, Ictalurus punctatus

(2012) Chao Li et al.   FISH & SHELLFISH IMMUNOLOGY

High Throughput Mining and Characterization of Microsatellites from Common Carp Genome

(2012) Peifeng Ji et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Transcriptome-Based Differentiation of Closely-Related Miscanthus Lines

(2012) Philippe Chouvarine et al.   PLoS One

RNA-Seq Identifies SNP Markers for Growth Traits in Rainbow Trout

(2012) Mohamed Salem et al.   PLoS One

Identification of Genes Related to White and Black Plumage Formation by RNA-Seq from White and Black Feather Bulbs in Ducks

(2012) Shijun Li et al.   PLoS One

Characterization of Common Carp Transcriptome: Sequencing, De Novo Assembly, Annotation and Comparative Genomics

(2012) Peifeng Ji et al.   PLoS One

Transcriptome Analysis of the Oriental River Prawn, Macrobrachium nipponense Using 454 Pyrosequencing for Discovery of Genes and Markers

(2012) Keyi Ma et al.   PLoS One

High-Throughput Sequence Analysis of Turbot (Scophthalmus maximus) Transcriptome Using 454-Pyrosequencing for the Discovery of Antiviral Immune Genes

(2012) Patricia Pereiro et al.   PLoS One

A fast and accurate SNP detection algorithm for next-generation sequencing data

(2012) Feng Xu et al.   Nature Communications

Genetic differentiation of wild and hatchery Oujiang color common carp: potential application to the identification of escapees

(2011) Yuqing Ma et al.   FISHERIES SCIENCE

Transcriptomic Analysis of the Clam Meretrix meretrix on Different Larval Stages

(2011) Pin Huan et al.   MARINE BIOTECHNOLOGY

Ensembl 2012

(2011) P. Flicek et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database

(2011) M. Punta et al.   NUCLEIC ACIDS RESEARCH

Transcriptomics of the Bed Bug (Cimex lectularius)

(2011) Xiaodong Bai et al.   PLoS One

Transcriptome Analysis of the Oriental Fruit Fly (Bactrocera dorsalis)

(2011) Guang-Mao Shen et al.   PLoS One

Colour change and assortment in the western rainbowfish

(2010) Gwendolen M. Rodgers et al.   ANIMAL BEHAVIOUR

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

Characterization of the rainbow trout transcriptome using Sanger and 454-pyrosequencing approaches

(2010) Mohamed Salem et al.   BMC GENOMICS

Transcriptome and expression profiling analysis revealed changes of multiple signaling pathways involved in immunity in the large yellow croaker during Aeromonas hydrophila infection

(2010) Yinnan Mu et al.   BMC GENOMICS

Transcriptional profiling of fibroblasts from patients with mutations in MCT8 and comparative analysis with the human brain transcriptome

(2010) W. Edward Visser et al.   HUMAN MOLECULAR GENETICS

Mining transcriptome sequences towards identifying adaptive single nucleotide polymorphisms in lake whitefish species pairs (Coregonusspp. Salmonidae)

(2010) SÉBASTIEN RENAUT et al.   MOLECULAR ECOLOGY

Molecular genetic structure and relationship of Chinese and Hungarian common carp (Cyprinus carpio L.) strains based on mitochondrial sequence

(2009) Chenghui Wang et al.   AQUACULTURE RESEARCH

Pigmentation Pathway Evolution after Whole-Genome Duplication in Fish

(2009) Ingo Braasch et al.   Genome Biology and Evolution

PROSITE, a protein domain database for functional characterization and annotation

(2009) Christian J. A. Sigrist et al.   NUCLEIC ACIDS RESEARCH

Pigmentary function and evolution oftyrp1gene duplicates in fish

(2009) Ingo Braasch et al.   Pigment Cell & Melanoma Research

mc1r Pathway Regulation of Zebrafish Melanosome Dispersion

(2009) Jennifer Richardson et al.   Zebrafish

Evolution of Coloration Patterns

(2008) Meredith E. Protas et al.   Annual Review of Cell and Developmental Biology

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS