Deep sequencing for de novo construction of a marine fish (Sparus aurata) transcriptome database with a large coverage of protein-coding transcripts

Fast skeletal muscle transcriptome of the Gilthead sea bream (Sparus aurata) determined by next generation sequencing

(2012) Daniel Garcia de la serrana et al.   BMC GENOMICS

Dietary vegetable oils do not alter the intestine transcriptome of gilthead sea bream (Sparus aurata), but modulate the transcriptomic response to infection with Enteromyxum leei

(2012) Josep A Calduch-Giner et al.   BMC GENOMICS

Transcriptome Analysis of Silver Carp (Hypophthalmichthys molitrix) by Paired-End RNA Sequencing

(2012) B. Fu et al.   DNA RESEARCH

Characterization of rainbow trout gonad, brain and gill deep cDNA repertoires using a Roche 454-Titanium sequencing approach

(2012) Aurélie Le Cam et al.   GENE

Effects of Chronic Cortisol Administration on Global Expression of GR and the Liver Transcriptome in Sparus aurata

(2012) Mariana Teles et al.   MARINE BIOTECHNOLOGY

Performance comparison of benchtop high-throughput sequencing platforms

(2012) Nicholas J Loman et al.   NATURE BIOTECHNOLOGY

High-Throughput Sequence Analysis of Turbot (Scophthalmus maximus) Transcriptome Using 454-Pyrosequencing for the Discovery of Antiviral Immune Genes

(2012) Patricia Pereiro et al.   PLoS One

Transcriptome Analysis and SSR/SNP Markers Information of the Blunt Snout Bream (Megalobrama amblycephala)

(2012) Zexia Gao et al.   PLoS One

Ten Years of Pathway Analysis: Current Approaches and Outstanding Challenges

(2012) Purvesh Khatri et al.   PLoS Computational Biology

Constructing a fish metabolic network model

(2012) Shuzhao Li et al.   GENOME BIOLOGY

HMM-FRAME: accurate protein domain classification for metagenomic sequences containing frameshift errors

(2011) Yuan Zhang et al.   BMC BIOINFORMATICS

Skin healing and scale regeneration in fed and unfed sea bream, Sparus auratus

(2011) Florbela A Vieira et al.   BMC GENOMICS

The central role of RNA in human development and cognition

(2011) John S. Mattick   FEBS LETTERS

Transcriptomic Characterization of the Larval Stage in Gilthead Seabream (Sparus aurata) by 454 Pyrosequencing

(2011) Manuel Yúfera et al.   MARINE BIOTECHNOLOGY

Molecular profiling of the gilthead sea bream (Sparus aurata L.) response to chronic exposure to the myxosporean parasite Enteromyxum leei

(2011) Grace C. Davey et al.   MOLECULAR IMMUNOLOGY

The Pfam protein families database

(2011) M. Punta et al.   NUCLEIC ACIDS RESEARCH

Characteristics of 454 pyrosequencing data--enabling realistic simulation with flowsim

(2010) S. Balzer et al.   BIOINFORMATICS

An EST resource for tilapia based on 17 normalized libraries and assembly of 116,899 sequence tags

(2010) Bo-Young Lee et al.   BMC GENOMICS

Use of microarray technology to assess the time course of liver stress response after confinement exposure in gilthead sea bream (Sparus aurata L.)

(2010) Josep A Calduch-Giner et al.   BMC GENOMICS

Characterization of the rainbow trout transcriptome using Sanger and 454-pyrosequencing approaches

(2010) Mohamed Salem et al.   BMC GENOMICS

Gilthead sea bream (Sparus auratus) and European sea bass (Dicentrarchus labrax) expressed sequence tags: Characterization, tissue-specific expression and gene markers

(2010) Bruno Louro et al.   Marine Genomics

The Gypsy Database (GyDB) of mobile genetic elements: release 2.0

(2010) C. Llorens et al.   NUCLEIC ACIDS RESEARCH

Temporal pattern of loss/persistence of duplicate genes involved in signal transduction and metabolic pathways after teleost-specific genome duplication

(2009) Yukuto Sato et al.   BMC EVOLUTIONARY BIOLOGY

Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlx

(2009) Eli Meyer et al.   BMC GENOMICS

Next-generation DNA sequencing techniques

(2009) Wilhelm J. Ansorge   New Biotechnology

How important is intestinal cytochrome P450 3A metabolism?

(2009) Antonius E. van Herwaarden et al.   TRENDS IN PHARMACOLOGICAL SCIENCES

Development and validation of a gene expression oligo microarray for the gilthead sea bream (Sparus aurata)

(2008) Serena Ferraresso et al.   BMC GENOMICS

Expressed sequence tags (ESTs) from immune tissues of turbot (Scophthalmus maximus) challenged with pathogens

(2008) Belén G Pardo et al.   BMC Veterinary Research