The root microbiota—a fingerprint in the soil?

Intercontinental Dispersal of Bacteria and Archaea by Transpacific Winds

(2012) David J. Smith et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Modeling microbial community structure and functional diversity across time and space

(2012) Peter E. Larsen et al.   FEMS MICROBIOLOGY LETTERS

The role of local environment and geographical distance in determining community composition of arbuscular mycorrhizal fungi at the landscape scale

(2012) Christina Hazard et al.   ISME Journal

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota

(2012) Davide Bulgarelli et al.   NATURE

Structure, function and diversity of the healthy human microbiome

(2012)   NATURE

Senescence, ageing and death of the whole plant

(2012) Howard Thomas   NEW PHYTOLOGIST

Dispersal may limit the occurrence of specialist wood decay fungi already at small spatial scales

(2012) Veera Norros et al.   OIKOS

Harnessing the rhizosphere microbiome through plant breeding and agricultural management

(2012) Matthew G. Bakker et al.   PLANT AND SOIL

The Application of Ecological Theory Toward an Understanding of the Human Microbiome

(2012) E. K. Costello et al.   SCIENCE

The rhizosphere microbiome and plant health

(2012) Roeland L. Berendsen et al.   TRENDS IN PLANT SCIENCE

Dispersal limitation and the assembly of soilActinobacteriacommunities in a long-term chronosequence

(2012) Sarah D. Eisenlord et al.   Ecology and Evolution

Impact of root exudates and plant defense signaling on bacterial communities in the rhizosphere. A review

(2011) Rogier F. Doornbos et al.   Agronomy for Sustainable Development

Hidden Fungi, Emergent Properties: Endophytes and Microbiomes

(2011) Andrea Porras-Alfaro et al.   Annual Review of Phytopathology

Sources of Bacteria in Outdoor Air across Cities in the Midwestern United States

(2011) Robert M. Bowers et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Community assembly: alternative stable states or alternative transient states?

(2011) Tadashi Fukami et al.   ECOLOGY LETTERS

Our microbial selves: what ecology can teach us

(2011) Antonio Gonzalez et al.   EMBO REPORTS

Fungal and bacterial growth responses to N fertilization and pH in the 150-year ‘Park Grass’ UK grassland experiment

(2011) Johannes Rousk et al.   FEMS MICROBIOLOGY ECOLOGY

Distal gut microbiota of adolescent children is different from that of adults

(2011) Richard Agans et al.   FEMS MICROBIOLOGY ECOLOGY

Defining seasonal marine microbial community dynamics

(2011) Jack A Gilbert et al.   ISME Journal

Bacterial Communities Associated with Chenopodium album and Stellaria media Seeds from Arable Soils

(2011) Leonard S. van Overbeek et al.   MICROBIAL ECOLOGY

Endophytes of Grapevine Flowers, Berries, and Seeds: Identification of Cultivable Bacteria, Comparison with Other Plant Parts, and Visualization of Niches of Colonization

(2011) Stéphane Compant et al.   MICROBIAL ECOLOGY

Microbial Diversity Inside Pumpkins: Microhabitat-Specific Communities Display a High Antagonistic Potential Against Phytopathogens

(2011) Michael Fürnkranz et al.   MICROBIAL ECOLOGY

Flowers as Islands: Spatial Distribution of Nectar-Inhabiting Microfungi among Plants of Mimulus aurantiacus, a Hummingbird-Pollinated Shrub

(2011) Melinda Belisle et al.   MICROBIAL ECOLOGY

Modulation of Host Immunity by Beneficial Microbes

(2011) Christos Zamioudis et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Unravelling the effects of the environment and host genotype on the gut microbiome

(2011) Aymé Spor et al.   NATURE REVIEWS MICROBIOLOGY

Distinct seasonal assemblages of arbuscular mycorrhizal fungi revealed by massively parallel pyrosequencing

(2011) Alex J. Dumbrell et al.   NEW PHYTOLOGIST

Evolutionary ecology of plant-microbe interactions: soil microbial structure alters selection on plant traits

(2011) Jennifer A. Lau et al.   NEW PHYTOLOGIST

Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria

(2011) R. Mendes et al.   SCIENCE

Rhizosphere interactions between microorganisms and plants govern iron and phosphorus acquisition along the root axis – model and research methods

(2011) Petra Marschner et al.   SOIL BIOLOGY & BIOCHEMISTRY

Investigation on diversity and population succession dynamics of indigenous bacteria of the maize spermosphere

(2011) Yang Liu et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Soil microbes drive the classic plant diversity–productivity pattern

(2010) Stefan A. Schnitzer et al.   ECOLOGY

A meta-analysis of context-dependency in plant response to inoculation with mycorrhizal fungi

(2010) Jason D. Hoeksema et al.   ECOLOGY LETTERS

Assembly history dictates ecosystem functioning: evidence from wood decomposer communities

(2010) Tadashi Fukami et al.   ECOLOGY LETTERS

Nutritional ecology of arbuscular mycorrhizal fungi

(2010) A. Hodge et al.   Fungal Ecology

Soil bacterial and fungal communities across a pH gradient in an arable soil

(2010) Johannes Rousk et al.   ISME Journal

Effects of Jasmonic Acid, Ethylene, and Salicylic Acid Signaling on the Rhizosphere Bacterial Community ofArabidopsis thaliana

(2010) Rogier F. Doornbos et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Gut Microbiota in Health and Disease

(2010) Inna Sekirov et al.   PHYSIOLOGICAL REVIEWS

Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors

(2010) A. K. Benson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Succession of microbial consortia in the developing infant gut microbiome

(2010) J. E. Koenig et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Changes through time: integrating microorganisms into the study of succession

(2010) Noah Fierer et al.   RESEARCH IN MICROBIOLOGY

Soil type and land use intensity determine the composition of arbuscular mycorrhizal fungal communities

(2010) Fritz Oehl et al.   SOIL BIOLOGY & BIOCHEMISTRY

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Root tip competition among ectomycorrhizal fungi: Are priority effects a rule or an exception?

(2009) Peter G. Kennedy et al.   ECOLOGY

Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere

(2009) Gabriele Berg et al.   FEMS MICROBIOLOGY ECOLOGY

Microbial diversity in alpine tundra soils correlates with snow cover dynamics

(2009) Lucie Zinger et al.   ISME Journal

Relative roles of niche and neutral processes in structuring a soil microbial community

(2009) Alex J Dumbrell et al.   ISME Journal

Weights in the Balance: Jasmonic Acid and Salicylic Acid Signaling in Root-Biotroph Interactions

(2009) Caroline Gutjahr et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Resource stoichiometry elucidates the structure and function of arbuscular mycorrhizas across scales

(2009) Nancy Collins Johnson   NEW PHYTOLOGIST

Plant root growth, architecture and function

(2009) Angela Hodge et al.   PLANT AND SOIL

The rhizosphere zoo: An overview of plant-associated communities of microorganisms, including phages, bacteria, archaea, and fungi, and of some of their structuring factors

(2009) M. Buée et al.   PLANT AND SOIL

Regulation and function of root exudates

(2009) DAYAKAR V. BADRI et al.   PLANT CELL AND ENVIRONMENT

Plant growth-promoting bacteria in the rhizo- and endosphere of plants: Their role, colonization, mechanisms involved and prospects for utilization

(2009) Stéphane Compant et al.   SOIL BIOLOGY & BIOCHEMISTRY

PLANT–SOIL–MICROORGANISM INTERACTIONS: HERITABLE RELATIONSHIP BETWEEN PLANT GENOTYPE AND ASSOCIATED SOIL MICROORGANISMS

(2008) Jennifer A. Schweitzer et al.   ECOLOGY

The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems

(2008) Marcel G. A. van der Heijden et al.   ECOLOGY LETTERS

Examining the fungal and bacterial niche overlap using selective inhibitors in soil

(2008) Johannes Rousk et al.   FEMS MICROBIOLOGY ECOLOGY

Influence of plant developmental stage on microbial community structure and activity in the rhizosphere of three field crops

(2008) Ashley Houlden et al.   FEMS MICROBIOLOGY ECOLOGY

Community analysis of arbuscular mycorrhizal fungi and bacteria in the maize mycorrhizosphere in a long-term fertilization trial

(2008) Jonas F. Toljander et al.   FEMS MICROBIOLOGY ECOLOGY

More than 400 million years of evolution and some plants still can't make it on their own: plant stress tolerance via fungal symbiosis

(2008) R. Rodriguez et al.   JOURNAL OF EXPERIMENTAL BOTANY

Bacterial effects on arbuscular mycorrhizal fungi and mycorrhiza development as influenced by the bacteria, fungi, and host plant

(2008) Barbara Pivato et al.   MYCORRHIZA

A core gut microbiome in obese and lean twins

(2008) Peter J. Turnbaugh et al.   NATURE

The rhizosphere: a playground and battlefield for soilborne pathogens and beneficial microorganisms

(2008) Jos M. Raaijmakers et al.   PLANT AND SOIL

Plant-driven selection of microbes

(2008) Anton Hartmann et al.   PLANT AND SOIL

Resistance, resilience, and redundancy in microbial communities

(2008) S. D. Allison et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA