标题
An update on LNCipedia: a database for annotated human lncRNA sequences
作者
关键词
-
出版物
NUCLEIC ACIDS RESEARCH
Volume 43, Issue D1, Pages D174-D180
出版商
Oxford University Press (OUP)
发表日期
2014-11-07
DOI
10.1093/nar/gku1060
参考文献
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注意：仅列出部分参考文献，下载原文获取全部文献信息。- Identification of small ORFs in vertebrates using ribosome footprinting and evolutionary conservation
- (2014) A. A. Bazzini et al. EMBO JOURNAL
- Ribosome profiling reveals resemblance between long non-coding RNAs and 5′ leaders of coding RNAs
- (2013) Guo-Liang Chew et al. DEVELOPMENT
- Pride-asap: Automatic fragment ion annotation of identified PRIDE spectra
- (2013) Niels Hulstaert et al. Journal of Proteomics
- RefSeq: an update on mammalian reference sequences
- (2013) Kim D. Pruitt et al. NUCLEIC ACIDS RESEARCH
- CPAT: Coding-Potential Assessment Tool using an alignment-free logistic regression model
- (2013) Liguo Wang et al. NUCLEIC ACIDS RESEARCH
- NONCODEv4: exploring the world of long non-coding RNA genes
- (2013) Chaoyong Xie et al. NUCLEIC ACIDS RESEARCH
- Distributed computing and data storage in proteomics: Many hands make light work, and a stronger memory
- (2013) Kenneth Verheggen et al. PROTEOMICS
- Identification of expressed and conserved human noncoding RNAs
- (2013) M. M. Nielsen et al. RNA
- Pervasive Transcription of the Human Genome Produces Thousands of Previously Unidentified Long Intergenic Noncoding RNAs
- (2013) Matthew J. Hangauer et al. PLoS Genetics
- Pinstripe: a suite of programs for integrating transcriptomic and proteomic datasets identifies novel proteins and improves differentiation of protein-coding and non-coding genes
- (2012) Dennis K. Gascoigne et al. BIOINFORMATICS
- STAR: ultrafast universal RNA-seq aligner
- (2012) Alexander Dobin et al. BIOINFORMATICS
- Current methods for global proteome identification
- (2012) Marc Vaudel et al. Expert Review of Proteomics
- Peptidomic discovery of short open reading frame–encoded peptides in human cells
- (2012) Sarah A Slavoff et al. Nature Chemical Biology
- LNCipedia: a database for annotated human lncRNA transcript sequences and structures
- (2012) Pieter-Jan Volders et al. NUCLEIC ACIDS RESEARCH
- The Proteomics Identifications (PRIDE) database and associated tools: status in 2013
- (2012) Juan Antonio Vizcaíno et al. NUCLEIC ACIDS RESEARCH
- DIANA-LncBase: experimentally verified and computationally predicted microRNA targets on long non-coding RNAs
- (2012) Maria D. Paraskevopoulou et al. NUCLEIC ACIDS RESEARCH
- Ensembl 2013
- (2012) Paul Flicek et al. NUCLEIC ACIDS RESEARCH
- LncRNADisease: a database for long-non-coding RNA-associated diseases
- (2012) Geng Chen et al. NUCLEIC ACIDS RESEARCH
- Global mapping of translation initiation sites in mammalian cells at single-nucleotide resolution
- (2012) S. Lee et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The evolution of RNAs with multiple functions
- (2011) Marcel E. Dinger et al. BIOCHIMIE
- PhyloCSF: a comparative genomics method to distinguish protein coding and non-coding regions
- (2011) M. F. Lin et al. BIOINFORMATICS
- compomics-utilities: an open-source Java library for computational proteomics
- (2011) Harald Barsnes et al. BMC BIOINFORMATICS
- Ribosome Profiling of Mouse Embryonic Stem Cells Reveals the Complexity and Dynamics of Mammalian Proteomes
- (2011) Nicholas T. Ingolia et al. CELL
- Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses
- (2011) M. N. Cabili et al. GENES & DEVELOPMENT
- Analysis of the Resolution Limitations of Peptide Identification Algorithms
- (2011) Niklaas Colaert et al. JOURNAL OF PROTEOME RESEARCH
- The functional role of long non-coding RNA in human carcinomas
- (2011) Ewan A Gibb et al. Molecular Cancer
- The Polycomb complex PRC2 and its mark in life
- (2011) Raphaël Margueron et al. NATURE
- NONCODE v3.0: integrative annotation of long noncoding RNAs
- (2011) D. Bu et al. NUCLEIC ACIDS RESEARCH
- Peptide identification quality control
- (2011) Marc Vaudel et al. PROTEOMICS
- SearchGUI: An open-source graphical user interface for simultaneous OMSSA and X!Tandem searches
- (2011) Marc Vaudel et al. PROTEOMICS
- PHAST and RPHAST: phylogenetic analysis with space/time models
- (2010) M. J. Hubisz et al. BRIEFINGS IN BIOINFORMATICS
- Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis
- (2010) Rajnish A. Gupta et al. NATURE
- lncRNAdb: a reference database for long noncoding RNAs
- (2010) Paulo P. Amaral et al. NUCLEIC ACIDS RESEARCH
- Long Noncoding RNA as Modular Scaffold of Histone Modification Complexes
- (2010) M.-C. Tsai et al. SCIENCE
- Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals
- (2009) Mitchell Guttman et al. NATURE
- Long non-coding RNAs: insights into functions
- (2009) Tim R. Mercer et al. NATURE REVIEWS GENETICS
- The PSI-MOD community standard for representation of protein modification data
- (2008) Luisa Montecchi-Palazzi et al. NATURE BIOTECHNOLOGY
- Differentiating Protein-Coding and Noncoding RNA: Challenges and Ambiguities
- (2008) Marcel E. Dinger et al. PLoS Computational Biology
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