Use of genotyping by sequencing data to develop a high-throughput and multifunctional SNP panel for conservation applications in Pacific lamprey

Single-nucleotide polymorphisms (SNPs) identified through genotyping-by-sequencing improve genetic stock identification of Chinook salmon (Oncorhynchus tshawytscha) from western Alaska

(2014) Wesley A. Larson et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Monitoring Stock-Specific Abundance, Run Timing, and Straying of Chinook Salmon in the Columbia River Using Genetic Stock Identification (GSI)

(2014) Jon E. Hess et al.   NORTH AMERICAN JOURNAL OF FISHERIES MANAGEMENT

Genetic-Based Estimates of Adult Chinook Salmon Spawner Abundance from Carcass Surveys and Juvenile Out-Migrant Traps

(2014) Daniel J. Rawding et al.   TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY

Distribution of Pacific LampreyEntosphenus tridentatusin Watersheds of Puget Sound Based on Smolt Monitoring Data

(2013) Michael C. Hayes et al.   NORTHWEST SCIENCE

Factors affecting dam passage and upstream distribution of adult Pacific lamprey in the interior Columbia River basin

(2012) Matthew L. Keefer et al.   ECOLOGY OF FRESHWATER FISH

Translocating Adult Pacific Lamprey within the Columbia River Basin: State of the Science

(2012) David L. Ward et al.   FISHERIES

Genetic diversity, endemism and phylogeny of lampreys within the genusLampetra sensu stricto(Petromyzontiformes: Petromyzontidae) in western North America

(2012) D. A. Boguski et al.   JOURNAL OF FISH BIOLOGY

Neither philopatric nor panmictic: microsatellite and mtDNA evidence suggests lack of natal homing but limits to dispersal in Pacific lamprey

(2012) ERIN K. SPICE et al.   MOLECULAR ECOLOGY

Genome-wide association reveals genetic basis for the propensity to migrate in wild populations of rainbow and steelhead trout

(2012) Benjamin C. Hecht et al.   MOLECULAR ECOLOGY

Environmental DNA

(2012) PIERRE TABERLET et al.   MOLECULAR ECOLOGY

Population genomics of Pacific lamprey: adaptive variation in a highly dispersive species

(2012) Jon E. Hess et al.   MOLECULAR ECOLOGY

RAD sequencing yields a high success rate for westslope cutthroat and rainbow trout species-diagnostic SNP assays

(2012) STEPHEN J. AMISH et al.   Molecular Ecology Resources

Use of Night Video to Enumerate Adult Pacific Lamprey Passage at Hydroelectric Dams: Challenges and Opportunities to Improve Escapement Estimates

(2012) Tami S. Clabough et al.   NORTH AMERICAN JOURNAL OF FISHERIES MANAGEMENT

Identification of putative migratory pheromones from Pacific lamprey (Lampetra tridentata)

(2011) Sang-Seon Yun et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Assessing the benefits and risks of translocations in changing environments: a genetic perspective

(2011) Andrew R. Weeks et al.   Evolutionary Applications

Short Communication Characterization of 12 microsatellite loci for the Pacific lamprey, Entosphenus tridentatus (Petromyzontidae), and cross-amplification in five other lamprey species

(2011) E.K. Spice et al.   GENETICS AND MOLECULAR RESEARCH

Genotype and SNP calling from next-generation sequencing data

(2011) Rasmus Nielsen et al.   NATURE REVIEWS GENETICS

Resolving Adaptive and Demographic Divergence among Chinook Salmon Populations in the Columbia River Basin

(2011) Andrew P. Matala et al.   TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY

Similarities, Differences, and Unknowns in Biology and Management of Three Parasitic Lampreys of North America

(2010) Benjamin J. Clemens et al.   FISHERIES

Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

(2010) LAURENT EXCOFFIER et al.   Molecular Ecology Resources

PASSaGE: Pattern Analysis, Spatial Statistics and Geographic Exegesis. Version 2

(2010) Michael S. Rosenberg et al.   Methods in Ecology and Evolution

A new method for estimating effective population sizes from a single sample of multilocus genotypes

(2009) JINLIANG WANG   MOLECULAR ECOLOGY

COLONY: a program for parentage and sibship inference from multilocus genotype data

(2009) OWEN R. JONES et al.   Molecular Ecology Resources

Effects of Body Size and River Environment on the Upstream Migration of Adult Pacific Lampreys

(2009) Matthew L. Keefer et al.   NORTH AMERICAN JOURNAL OF FISHERIES MANAGEMENT

Localized Genetic Structure Persists in Wild Populations of Chinook Salmon in the John Day River Despite Gene Flow from Outside Sources

(2009) Shawn R. Narum et al.   TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY

LOSITAN: A workbench to detect molecular adaptation based on a Fst-outlier method

(2008) Tiago Antao et al.   BMC BIOINFORMATICS

Mitochondrial DNA evidence for high levels of gene flow among populations of a widely distributed anadromous lamprey Entosphenus tridentatus (Petromyzontidae)

(2008) D. H. Goodman et al.   JOURNAL OF FISH BIOLOGY

Spatial analysis method (sam): a software tool combining molecular and environmental data to identify candidate loci for selection

(2008) STÉPHANE JOOST et al.   Molecular Ecology Resources

Amplified Fragment Length Polymorphism Assessment of Genetic Diversity in Pacific Lampreys

(2008) Binbin Lin et al.   NORTH AMERICAN JOURNAL OF FISHERIES MANAGEMENT