Large-scale fungal diversity assessment in the Andean Yungas forests reveals strong community turnover among forest types along an altitudinal gradient

Effects of Climate Change on Subtropical Forests of South America

(2016) Silvia Pacheco et al.   Tropical Conservation Science

Deep Ion Torrent sequencing identifies soil fungal community shifts after frequent prescribed fires in a southeastern US forest ecosystem

(2013) Shawn P. Brown et al.   FEMS MICROBIOLOGY ECOLOGY

Towards a unified paradigm for sequence-based identification of fungi

(2013) Urmas Kõljalg et al.   MOLECULAR ECOLOGY

Fungal community analysis by high-throughput sequencing of amplified markers - a user's guide

(2013) Björn D. Lindahl et al.   NEW PHYTOLOGIST

New penicillin-producing Penicillium species and an overview of section Chrysogena

(2013) J. Houbraken et al.   PERSOONIA

Diaporthe: a genus of endophytic, saprobic and plant pathogenic fungi

(2013) R. R. Gomes et al.   PERSOONIA

DNA barcoding in Mucorales: an inventory of biodiversity

(2013) G. Walther et al.   PERSOONIA

Roots and Associated Fungi Drive Long-Term Carbon Sequestration in Boreal Forest

(2013) K. E. Clemmensen et al.   SCIENCE

Fungal palaeodiversity revealed using high-throughput metabarcoding of ancient DNA from arctic permafrost

(2012) Eva Bellemain et al.   ENVIRONMENTAL MICROBIOLOGY

New primers to amplify the fungal ITS2 region - evaluation by 454-sequencing of artificial and natural communities

(2012) Katarina Ihrmark et al.   FEMS MICROBIOLOGY ECOLOGY

Towards global patterns in the diversity and community structure of ectomycorrhizal fungi

(2012) LEHO TEDERSOO et al.   MOLECULAR ECOLOGY

Towards next-generation biodiversity assessment using DNA metabarcoding

(2012) PIERRE TABERLET et al.   MOLECULAR ECOLOGY

Differential hypogeous sporocarp production from Nothofagus dombeyi and N. pumilio forests in southern Argentina

(2012) Eduardo R. Nouhra et al.   MYCOLOGIA

diversity and systematics of the sequestrate genus Octaviania in Japan: two new subgenera and eleven new species

(2012) T. Orihara et al.   PERSOONIA

Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi

(2012) C. L. Schoch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Fungi: 1, 2, 3 … 5.1 million species?

(2011) Meredith Blackwell   AMERICAN JOURNAL OF BOTANY

Patterns of macromycete community assemblage along an elevation gradient: options for fungal gradient and metacommunity analyse

(2011) Marko Gómez-Hernández et al.   BIODIVERSITY AND CONSERVATION

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Removing Noise From Pyrosequenced Amplicons

(2011) Christopher Quince et al.   BMC BIOINFORMATICS

Massively parallel rRNA gene sequencing exacerbates the potential for biased community diversity comparisons due to variable library sizes

(2011) Thomas M. Gihring et al.   ENVIRONMENTAL MICROBIOLOGY

An arctic community of symbiotic fungi assembled by long-distance dispersers: phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA

(2011) József Geml et al.   JOURNAL OF BIOGEOGRAPHY

Native arbuscular mycorrhizal fungi in the Yungas forests, Argentina

(2011) Alejandra G. Becerra et al.   MYCOLOGIA

Ectomycorrhizal fungi in Mexican Alnus forests support the host co-migration hypothesis and continental-scale patterns in phylogeography

(2011) Peter G. Kennedy et al.   MYCORRHIZA

Regional and local patterns of ectomycorrhizal fungal diversity and community structure along an altitudinal gradient in the Hyrcanian forests of northern Iran

(2011) Mohammad Bahram et al.   NEW PHYTOLOGIST

Arbuscular mycorrhizal fungal diversity along a Tibetan elevation gradient

(2011) J.P. Gai et al.   PEDOBIOLOGIA

Sebacinales Everywhere: Previously Overlooked Ubiquitous Fungal Endophytes

(2011) Michael Weiß et al.   PLoS One

Progress in molecular and morphological taxon discovery in Fungi and options for formal classification of environmental sequences

(2011) David S. Hibbett et al.   Fungal Biology Reviews

Manipulation of FASTQ data with Galaxy

(2010) D. Blankenberg et al.   BIOINFORMATICS

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

High diversity of root associated fungi in both alpine and arctic Dryas octopetala

(2010) Marit Bjorbækmo et al.   BMC PLANT BIOLOGY

Structure and resilience of fungal communities in Alaskan boreal forest soilsThis article is one of a selection of papers from The Dynamics of Change in Alaska’s Boreal Forests: Resilience and Vulnerability in Response to Climate Warming.

(2010) D. Lee Taylor et al.   CANADIAN JOURNAL OF FOREST RESEARCH

A preliminary account of Xylaria in the Tucuman Province, Argentina, with a key to the known species from the Northern Provinces

(2010) Adriana I. Hladki et al.   FUNGAL DIVERSITY

Soil bacterial and fungal communities across a pH gradient in an arable soil

(2010) Johannes Rousk et al.   ISME Journal

Massively parallel 454-sequencing of fungal communities inQuercusspp. ectomycorrhizas indicates seasonal dynamics in urban and rural sites

(2010) ARI JUMPPONEN et al.   MOLECULAR ECOLOGY

Description and identification of Alnus acuminata ectomycorrhizae from Argentinean alder stands

(2010) Karin Pritsch et al.   MYCOLOGIA

Phylogenetic and ecological analyses of soil and sporocarp DNA sequences reveal high diversity and strong habitat partitioning in the boreal ectomycorrhizal genus Russula (Russulales; Basidiomycota)

(2010) József Geml et al.   NEW PHYTOLOGIST

454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases

(2010) Leho Tedersoo et al.   NEW PHYTOLOGIST

The UNITE database for molecular identification of fungi - recent updates and future perspectives

(2010) Kessy Abarenkov et al.   NEW PHYTOLOGIST

Alnus acuminata in dual symbiosis withFrankia and two different ectomycorrhizal fungi (Alpova austroalnicola andAlpova diplophloeus) growing in soilless growth medium

(2010) Alejandra G. Becerra et al.   SYMBIOSIS

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Ascomycetes associated with ectomycorrhizas: molecular diversity and ecology with particular reference to theHelotiales

(2009) Leho Tedersoo et al.   ENVIRONMENTAL MICROBIOLOGY

Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates

(2009) Victor Kunin et al.   ENVIRONMENTAL MICROBIOLOGY

Physiological traits of Penicillium glabrum strain LCP 08.5568, a filamentous fungus isolated from bottled aromatised mineral water

(2009) L. Nevarez et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Aspen succession and nitrogen loading: a case for epiphytic lichens as bioindicators in the Rocky Mountains, USA

(2009) Paul C. Rogers et al.   JOURNAL OF VEGETATION SCIENCE

Molecular phylogenetic biodiversity assessment of arctic and boreal ectomycorrhizalLactariusPers. (Russulales; Basidiomycota) in Alaska, based on soil and sporocarp DNA

(2009) JÓZSEF GEML et al.   MOLECULAR ECOLOGY

Arbuscular mycorrhizae of dominant plant species in Yungas forests, Argentina

(2009) Alejandra G. Becerra et al.   MYCOLOGIA

Ectomycorrhizal lifestyle in fungi: global diversity, distribution, and evolution of phylogenetic lineages

(2009) Leho Tedersoo et al.   MYCORRHIZA

Revisiting ectomycorrhizal fungi of the genus Alnus : differential host specificity, diversity and determinants of the fungal community

(2009) Leho Tedersoo et al.   NEW PHYTOLOGIST

Using heterozygosity to estimate a percentage DNA sequence similarity for environmental species’ delimitation across basidiomycete fungi

(2009) Karen W. Hughes et al.   NEW PHYTOLOGIST

BioVenn – a web application for the comparison and visualization of biological lists using area-proportional Venn diagrams

(2008) Tim Hulsen et al.   BMC GENOMICS

The influence of soil properties on the structure of bacterial and fungal communities across land-use types

(2008) Christian L. Lauber et al.   SOIL BIOLOGY & BIOCHEMISTRY