Translational biomarker discovery in clinical metabolomics: an introductory tutorial

Metabolomics and first-trimester prediction of early-onset preeclampsia

(2012) Ray O. Bahado-Singh et al.   Journal of Maternal-Fetal & Neonatal Medicine

Toward interoperable bioscience data

(2012) Susanna-Assunta Sansone et al.   NATURE GENETICS

The importance of experimental design and QC samples in large-scale and MS-driven untargeted metabolomic studies of humans

(2012) Warwick B Dunn et al.   Bioanalysis

MPEA—metabolite pathway enrichment analysis

(2011) Matti Kankainen et al.   BIOINFORMATICS

Caveats and pitfalls of ROC analysis in clinical microarray research (and how to avoid them)

(2011) D. Berrar et al.   BRIEFINGS IN BIOINFORMATICS

Double-check: validation of diagnostic statistics for PLS-DA models in metabolomics studies

(2011) Ewa Szymańska et al.   Metabolomics

State-of-the art data normalization methods improve NMR-based metabolomic analysis

(2011) Stefanie M. Kohl et al.   Metabolomics

Web-based inference of biological patterns, functions and pathways from metabolomic data using MetaboAnalyst

(2011) Jianguo Xia et al.   Nature Protocols

Metscape: a Cytoscape plug-in for visualizing and interpreting metabolomic data in the context of human metabolic networks

(2010) Jing Gao et al.   BIOINFORMATICS

MetPA: a web-based metabolomics tool for pathway analysis and visualization

(2010) J. Xia et al.   BIOINFORMATICS

Systems level studies of mammalian metabolomes: the roles of mass spectrometry and nuclear magnetic resonance spectroscopy

(2010) Warwick B. Dunn et al.   CHEMICAL SOCIETY REVIEWS

Robust and classical PLS regression compared

(2010) Bettina Liebmann et al.   JOURNAL OF CHEMOMETRICS

MSEA: a web-based tool to identify biologically meaningful patterns in quantitative metabolomic data

(2010) J. Xia et al.   NUCLEIC ACIDS RESEARCH

Independent filtering increases detection power for high-throughput experiments

(2010) R. Bourgon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Filtering for increased power for microarray data analysis

(2009) Amber J Hackstadt et al.   BMC BIOINFORMATICS

Repeated double cross validation

(2009) Peter Filzmoser et al.   JOURNAL OF CHEMOMETRICS

How does multiple testing correction work?

(2009) William S Noble   NATURE BIOTECHNOLOGY

Receiver-operating characteristic curve analysis in diagnostic, prognostic and predictive biomarker research

(2008) K. Soreide   JOURNAL OF CLINICAL PATHOLOGY

Assessment of PLSDA cross validation

(2008) Johan A. Westerhuis et al.   Metabolomics