Design criteria for synthetic riboswitches acting on transcription

Small RNA regulators in bacteria: powerful tools for metabolic engineering and synthetic biology

(2014) Zhen Kang et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

A family of synthetic riboswitches adopts a kinetic trapping mechanism

(2014) Dennis M. Mishler et al.   NUCLEIC ACIDS RESEARCH

The centrality of RNA for engineering gene expression

(2013) James Chappell et al.   Biotechnology Journal

Ligand-Dependent Upregulation of Ribosomal Shunting

(2013) Atsushi Ogawa   CHEMBIOCHEM

Characterization of 582 natural and synthetic terminators and quantification of their design constraints

(2013) Ying-Ja Chen et al.   NATURE METHODS

Measurement and modeling of intrinsic transcription terminators

(2013) Guillaume Cambray et al.   NUCLEIC ACIDS RESEARCH

Engineering modular ‘ON’ RNA switches using biological components

(2013) Pablo Ceres et al.   NUCLEIC ACIDS RESEARCH

Translation rate is controlled by coupled trade-offs between site accessibility, selective RNA unfolding and sliding at upstream standby sites

(2013) Amin Espah Borujeni et al.   NUCLEIC ACIDS RESEARCH

Modularity of Select Riboswitch Expression Platforms Enables Facile Engineering of Novel Genetic Regulatory Devices

(2013) Pablo Ceres et al.   ACS Synthetic Biology

Engineered riboswitches: Expanding researchers' toolbox with synthetic RNA regulators

(2012) Alexander Wittmann et al.   FEBS LETTERS

Thermogenetic tools to monitor temperature-dependent gene expression in bacteria

(2012) Birgit Klinkert et al.   JOURNAL OF BIOTECHNOLOGY

De novo design of a synthetic riboswitch that regulates transcription termination

(2012) M. Wachsmuth et al.   NUCLEIC ACIDS RESEARCH

ViennaRNA Package 2.0

(2011) Ronny Lorenz et al.   Algorithms for Molecular Biology

Engineering Biological Systems with Synthetic RNA Molecules

(2011) Joe C. Liang et al.   MOLECULAR CELL

Prospects for Riboswitch Discovery and Analysis

(2011) Ronald R. Breaker   MOLECULAR CELL

Versatile RNA-sensing transcriptional regulators for engineering genetic networks

(2011) J. B. Lucks et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Emerging Applications of Riboswitches in Chemical Biology

(2010) Shana Topp et al.   ACS Chemical Biology

Genetic control of mammalian T-cell proliferation with synthetic RNA regulatory systems

(2010) Y. Y. Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Riboswitches and the RNA World

(2010) R. R. Breaker   Cold Spring Harbor Perspectives in Biology

A fast and efficient translational control system for conditional expression of yeast genes

(2009) Peter Kötter et al.   NUCLEIC ACIDS RESEARCH

A FACS-Based Approach to Engineering Artificial Riboswitches

(2008) Casey C. Fowler et al.   CHEMBIOCHEM

Riboswitch RNAs: using RNA to sense cellular metabolism

(2008) T. M. Henkin   GENES & DEVELOPMENT

Folding Kinetics of Large RNAs

(2008) Michael Geis et al.   JOURNAL OF MOLECULAR BIOLOGY