Characterization of 582 natural and synthetic terminators and quantification of their design constraints

Synthetic circuits integrating logic and memory in living cells

(2013) Piro Siuti et al.   NATURE BIOTECHNOLOGY

Measurement and modeling of intrinsic transcription terminators

(2013) Guillaume Cambray et al.   NUCLEIC ACIDS RESEARCH

Genetic programs constructed from layered logic gates in single cells

(2012) Tae Seok Moon et al.   NATURE

Ribozyme-based insulator parts buffer synthetic circuits from genetic context

(2012) Chunbo Lou et al.   NATURE BIOTECHNOLOGY

Modular control of multiple pathways using engineered orthogonal T7 polymerases

(2012) Karsten Temme et al.   NUCLEIC ACIDS RESEARCH

Bacterial Transcription Terminators: The RNA 3′-End Chronicles

(2011) Jason M. Peters et al.   JOURNAL OF MOLECULAR BIOLOGY

RNIE: genome-wide prediction of bacterial intrinsic terminators

(2011) P. P. Gardner et al.   NUCLEIC ACIDS RESEARCH

mRNA pseudoknot structures can act as ribosomal roadblocks

(2011) Jesper Tholstrup et al.   NUCLEIC ACIDS RESEARCH

Structural Energetics of the Adenine Tract from an Intrinsic Transcription Terminator

(2010) Yuegao Huang et al.   JOURNAL OF MOLECULAR BIOLOGY

Attenuation regulation of the amino acid and aminoacyl-tRNA biosynthesis operons in bacteria: A comparative genomic analysis

(2010) K. V. Lopatovskaya et al.   MOLECULAR BIOLOGY

WebGeSTer DB—a transcription terminator database

(2010) Anirban Mitra et al.   NUCLEIC ACIDS RESEARCH

RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units)

(2010) S. Gama-Castro et al.   NUCLEIC ACIDS RESEARCH

Designing and engineering evolutionary robust genetic circuits

(2010) Sean C Sleight et al.   Journal of Biological Engineering

Dynamics and Stability of Individual Base Pairs in Two Homologous RNA−DNA Hybrids

(2009) Yuegao Huang et al.   BIOCHEMISTRY

Occurrence, divergence and evolution of intrinsic terminators across Eubacteria

(2009) Anirban Mitra et al.   GENOMICS

Applied Force Reveals Mechanistic and Energetic Details of Transcription Termination

(2008) Matthew H. Larson et al.   CELL