The advance of tomato disease-related microRNAs

Characterization of miRNAs associated with Botrytis cinerea infection of tomato leaves

(2015) Weibo Jin et al.   BMC PLANT BIOLOGY

Transcriptional control of plant defence responses

(2014) Pierre Buscaill et al.   CURRENT OPINION IN PLANT BIOLOGY

MicroRNA-Based Biotechnology for Plant Improvement

(2014) Baohong Zhang et al.   JOURNAL OF CELLULAR PHYSIOLOGY

Down-regulation of AUXIN RESPONSE FACTORS 6 and 8 by microRNA 167 leads to floral development defects and female sterility in tomato

(2014) Ning Liu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Changes in relative expression levels of viroid-specific small RNAs and microRNAs in tomato plants infected with severe and mild symptom-inducing isolates of Potato spindle tuber viroid

(2014) Daiki Tsushima et al.   JOURNAL OF GENERAL PLANT PATHOLOGY

Identification and functional analysis of novel and conserved microRNAs in tomato

(2014) Yushi Luan et al.   MOLECULAR BIOLOGY REPORTS

Prediction and validation of potential pathogenic microRNAs involved in Phytophthora infestans infection

(2014) Juanjuan Cui et al.   MOLECULAR BIOLOGY REPORTS

MAPK cascades and major abiotic stresses

(2014) Khaled Moustafa et al.   PLANT CELL REPORTS

Role of microRNAs in aluminum stress in plants

(2014) Huyi He et al.   PLANT CELL REPORTS

Using a Viral Vector to Reveal the Role of MicroRNA159 in Disease Symptom Induction by a Severe Strain of Cucumber mosaic virus

(2014) Z. Du et al.   PLANT PHYSIOLOGY

Regulation of Copper Homeostasis and Biotic Interactions by MicroRNA 398b in Common Bean

(2014) Loreto Naya et al.   PLoS One

Plant microRNA-Target Interaction Identification Model Based on the Integration of Prediction Tools and Support Vector Machine

(2014) Jun Meng et al.   PLoS One

Rice miR172 induces flowering by suppressing OsIDS1 and SNB, two AP2 genes that negatively regulate expression of Ehd1 and florigens

(2014) Yang-Seok Lee et al.   Rice

Plant Nucleotide Binding Site–Leucine-Rich Repeat (NBS-LRR) Genes: Active Guardians in Host Defense Responses

(2013) Daniela Marone et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

In Silico Analysis the Complementarity of Tomato MicroRNA/MicroRNA* Sequences with Cucumber Mosaic Virus (CMV) Genomic RNAs

(2013) Junli Feng et al.   JOURNAL OF NANOSCIENCE AND NANOTECHNOLOGY

RNA silencing suppression by plant pathogens: defence, counter-defence and counter-counter-defence

(2013) Nathan Pumplin et al.   NATURE REVIEWS MICROBIOLOGY

Seed coat pigmentation in transgenic soybean expressing the silencing suppressor 2b gene of Cucumber mosaic virus

(2013) Kyoko Takagi et al.   PLANT CELL REPORTS

Phytophthora Have Distinct Endogenous Small RNA Populations That Include Short Interfering and microRNAs

(2013) Noah Fahlgren et al.   PLoS One

Fungal Small RNAs Suppress Plant Immunity by Hijacking Host RNA Interference Pathways

(2013) Arne Weiberg et al.   SCIENCE

miRNA164-directed cleavage of ZmNAC1 confers lateral root development in maize (Zea mays L.)

(2012) Jing Li et al.   BMC PLANT BIOLOGY

Altered Expression of MicroRNAs and Target mRNAs in Tomato Root and Stem Tissues upon Different Viral Infection

(2012) Junli Feng et al.   JOURNAL OF PHYTOPATHOLOGY

Bioinformatics prediction of miRNAs in the Prunus persica genome with validation of their precise sequences by miR-RACE

(2012) Yanping Zhang et al.   JOURNAL OF PLANT PHYSIOLOGY

Alteration of tomato microRNAs expression during fruit development upon Cucumber mosaic virus and Tomato aspermy virus infection

(2012) Junli Feng et al.   MOLECULAR BIOLOGY REPORTS

The tomato genome sequence provides insights into fleshy fruit evolution

(2012)   NATURE

A MicroRNA Superfamily Regulates Nucleotide Binding Site-Leucine-Rich Repeats and Other mRNAs

(2012) P. V. Shivaprasad et al.   PLANT CELL

Small RNAs containing the pathogenic determinant of a chloroplast-replicating viroid guide the degradation of a host mRNA as predicted by RNA silencing

(2012) Beatriz Navarro et al.   PLANT JOURNAL

Evidence for Small RNAs Homologous to Effector-Encoding Genes and Transposable Elements in the Oomycete Phytophthora infestans

(2012) Ramesh R. Vetukuri et al.   PLoS One

Tomato immune receptor Ve1 recognizes effector of multiple fungal pathogens uncovered by genome and RNA sequencing

(2012) R. de Jonge et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

MicroRNA regulation of plant innate immune receptors

(2012) F. Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Computational prediction and experimental verification of miRNAs in Panicum miliaceum L.

(2012) YongJun Wu et al.   Science China-Life Sciences

Transgenic tomato plants expressing artificial microRNAs for silencing the pre-coat and coat proteins of a begomovirus, Tomato leaf curl New Delhi virus, show tolerance to virus infection

(2012) Tien Van Vu et al.   VIRUS RESEARCH

Spatio-temporal expression of miRNAs in tomato tissues upon Cucumber mosaic virus and Tomato aspermy virus infections

(2011) Junli Feng et al.   ACTA BIOCHIMICA ET BIOPHYSICA SINICA

Analytical aspects of microRNA in diagnostics: A review

(2011) Mariàngels de Planell-Saguer et al.   ANALYTICA CHIMICA ACTA

Microarray-based Analysis of Tomato miRNA Regulated by Botrytis cinerea

(2011) Weibo Jin et al.   JOURNAL OF PLANT GROWTH REGULATION

Microarray-based identification of tomato microRNAs and time course analysis of their response to Cucumber mosaic virus infection

(2011) Qiu-lei Lang et al.   Journal of Zhejiang University-SCIENCE B

Differential effects of Cucumber mosaic virus satellite RNAs in the perturbation of microRNA-regulated gene expression in tomato

(2011) Junli Feng et al.   MOLECULAR BIOLOGY REPORTS

MiR398 and plant stress responses

(2011) Cheng Zhu et al.   PHYSIOLOGIA PLANTARUM

Genome-wide profiling of novel and conserved Populus microRNAs involved in pathogen stress response by deep sequencing

(2011) Lei Chen et al.   PLANTA

MicroRNAs in tomato plants

(2011) JinHua Zuo et al.   Science China-Life Sciences

TAPIR, a web server for the prediction of plant microRNA targets, including target mimics

(2010) Eric Bonnet et al.   BIOINFORMATICS

Characterization of plant miRNAs and small RNAs derived from potato spindle tuber viroid (PSTVd) in infected tomato

(2010) Natalie Diermann et al.   BIOLOGICAL CHEMISTRY

Comparing signaling mechanisms engaged in pattern-triggered and effector-triggered immunity

(2010) Kenichi Tsuda et al.   CURRENT OPINION IN PLANT BIOLOGY

Over-expression of sly-miR156a in tomato results in multiple vegetative and reproductive trait alterations and partial phenocopy of thesftmutant

(2010) Xiaohui Zhang et al.   FEBS LETTERS

miR398 regulation in rice of the responses to abiotic and biotic stresses depends onCSD1andCSD2expression

(2010) Yuzhu Lu et al.   FUNCTIONAL PLANT BIOLOGY

Identification, characterization and expression analysis of MicroRNAs and their targets in the potato (Solanum tuberosum)

(2010) Fuliang Xie et al.   GENE

Regulation of flowering time and floral patterning by miR172

(2010) Qian-Hao Zhu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Plant immunity: towards an integrated view of plant–pathogen interactions

(2010) Peter N. Dodds et al.   NATURE REVIEWS GENETICS

Visualizing RAD51-mediated joint molecules: implications for recombination mechanism and the effect of sequence heterology

(2010) D. Ristic et al.   NUCLEIC ACIDS RESEARCH

Temporal Control of Trichome Distribution by MicroRNA156-Targeted SPL Genes in Arabidopsis thaliana

(2010) N. Yu et al.   PLANT CELL

In silico analysis reveals that several tomato microRNA/microRNA∗ sequences exhibit propensity to bind to tomato leaf curl virus (ToLCV) associated genomes and most of their encoded open reading frames (ORFs)

(2010) Afsar Raza Naqvi et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Expression of artificial microRNAs in tomato confers efficient and stable virus resistance in a cell-autonomous manner

(2010) Xiaohui Zhang et al.   TRANSGENIC RESEARCH

MicroRNA profiling of tomato leaf curl new delhi virus (tolcndv) infected tomato leaves indicates that deregulation of mir159/319 and mir172 might be linked with leaf curl disease

(2010) Afsar R Naqvi et al.   Virology Journal

MicroRNAs: Target Recognition and Regulatory Functions

(2009) David P. Bartel   CELL

The quantification of tomato microRNAs response to viral infection by stem-loop real-time RT-PCR

(2009) Junli Feng et al.   GENE

Computational approaches for microRNA studies: a review

(2009) Li Li et al.   MAMMALIAN GENOME

Differential Effects of Mild and Severe Cucumber mosaic virus Strains in the Perturbation of MicroRNA-Regulated Gene Expression in Tomato Map to the 3′ Sequence of RNA 2

(2009) Fabrizio Cillo et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Biotic and abiotic stress down-regulate miR398 expression in Arabidopsis

(2009) Guru Jagadeeswaran et al.   PLANTA

Deep Sequencing of Viroid-Derived Small RNAs from Grapevine Provides New Insights on the Role of RNA Silencing in Plant-Viroid Interaction

(2009) Beatriz Navarro et al.   PLoS One

miR319a targeting ofTCP4is critical for petal growth and development inArabidopsis

(2009) Anwesha Nag et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Repression of Flowering by the miR172 Target SMZ

(2009) Johannes Mathieu et al.   PLOS BIOLOGY

A toolkit for analysing large-scale plant small RNA datasets

(2008) S. Moxon et al.   BIOINFORMATICS

Big impacts by small RNAs in plant development

(2008) George Chuck et al.   CURRENT OPINION IN PLANT BIOLOGY

Identification of conserved microRNAs and their targets from Solanum lycopersicum Mill

(2008) Jianguang Zhang et al.   GENE

Molecular biology of ethylene during tomato fruit development and maturation

(2008) Beatriz Cara et al.   PLANT SCIENCE

Widespread Translational Inhibition by Plant miRNAs and siRNAs

(2008) P. Brodersen et al.   SCIENCE