Characterization of miRNAs associated with Botrytis cinerea infection of tomato leaves

Tomato SlMKK2 and SlMKK4 contribute to disease resistance against Botrytis cinerea

(2014) Xiaohui Li et al.   BMC PLANT BIOLOGY

Dicer-like 3 produces transposable element-associated 24-nt siRNAs that control agricultural traits in rice

(2014) L. Wei et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Identification of miRNAs and their targets using high-throughput sequencing and degradome analysis in cytoplasmic male-sterile and its maintainer fertile lines of brassica juncea

(2013) Jinghua Yang et al.   BMC GENOMICS

miR394 and LCR are involved in Arabidopsis salt and drought stress responses in an abscisic acid-dependent manner

(2013) Jian Song et al.   BMC PLANT BIOLOGY

Constitutive Expression of a miR319 Gene Alters Plant Development and Enhances Salt and Drought Tolerance in Transgenic Creeping Bentgrass

(2013) M. Zhou et al.   PLANT PHYSIOLOGY

Fungal Small RNAs Suppress Plant Immunity by Hijacking Host RNA Interference Pathways

(2013) Arne Weiberg et al.   SCIENCE

siRNA-mediated DNA methylation and H3K9 dimethylation in plants

(2013) Chi Xu et al.   Protein & Cell

Genome-wide identification and expression analysis of heat-responsive and novel microRNAs in Populus tomentosa

(2012) Lei Chen et al.   GENE

Genome-wide identification of Brassica napus microRNAs and their targets in response to cadmium

(2012) Zhao Sheng Zhou et al.   JOURNAL OF EXPERIMENTAL BOTANY

Regulation of Leaf Morphology by MicroRNA394 and its Target LEAF CURLING RESPONSIVENESS

(2012) J. B. Song et al.   PLANT AND CELL PHYSIOLOGY

A MicroRNA Superfamily Regulates Nucleotide Binding Site-Leucine-Rich Repeats and Other mRNAs

(2012) P. V. Shivaprasad et al.   PLANT CELL

MicroRNA regulation of plant innate immune receptors

(2012) F. Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Characterization of statistical features for plant microRNA prediction

(2011) Vivek Thakur et al.   BMC GENOMICS

Identification of drought-responsive microRNAs in Medicago truncatula by genome-wide high-throughput sequencing

(2011) Tianzuo Wang et al.   BMC GENOMICS

MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs

(2011) J. Zhai et al.   GENES & DEVELOPMENT

Identification of conserved and novel microRNAs that are responsive to heat stress in Brassica rapa

(2011) Xiang Yu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Microarray-based Analysis of Tomato miRNA Regulated by Botrytis cinerea

(2011) Weibo Jin et al.   JOURNAL OF PLANT GROWTH REGULATION

Massive Analysis of Rice Small RNAs: Mechanistic Implications of Regulated MicroRNAs and Variants for Differential Target RNA Cleavage

(2011) D.-H. Jeong et al.   PLANT CELL

A set of miRNAs from Brassica napus in response to sulphate deficiency and cadmium stress

(2010) Si Qi Huang et al.   PLANT BIOTECHNOLOGY JOURNAL

Identification of iron-deficiency responsive microRNA genes and cis-elements in Arabidopsis

(2010) Wei Wei Kong et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Genome-Wide Medicago truncatula Small RNA Analysis Revealed Novel MicroRNAs and Isoforms Differentially Regulated in Roots and Nodules

(2009) C. Lelandais-Briere et al.   PLANT CELL

Uncovering Small RNA-Mediated Responses to Phosphate Deficiency in Arabidopsis by Deep Sequencing

(2009) L.-C. Hsieh et al.   PLANT PHYSIOLOGY

miR319a targeting ofTCP4is critical for petal growth and development inArabidopsis

(2009) Anwesha Nag et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

CleaveLand: a pipeline for using degradome data to find cleaved small RNA targets

(2008) C. Addo-Quaye et al.   BIOINFORMATICS

Endogenous siRNA and miRNA Targets Identified by Sequencing of the Arabidopsis Degradome

(2008) Charles Addo-Quaye et al.   CURRENT BIOLOGY

Tandem repeats upstream of the Arabidopsis endogene SDC recruit non-CG DNA methylation and initiate siRNA spreading

(2008) I. R. Henderson et al.   GENES & DEVELOPMENT

A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains

(2008) Q.-H. Zhu et al.   GENOME RESEARCH

Criteria for Annotation of Plant MicroRNAs

(2008) B. C. Meyers et al.   PLANT CELL

Stress-responsive microRNAs inPopulus

(2008) Shanfa Lu et al.   PLANT JOURNAL

Microarray-based analysis of stress-regulated microRNAs in Arabidopsis thaliana

(2008) H.-H. Liu et al.   RNA

Control of Jasmonate Biosynthesis and Senescence by miR319 Targets

(2008) Carla Schommer et al.   PLOS BIOLOGY

Small RNA-Directed Epigenetic Natural Variation in Arabidopsis thaliana

(2008) Jixian Zhai et al.   PLoS Genetics