4.5 Article

Common variants in or near FGF5, CYP17A1 and MTHFR genes are associated with blood pressure and hypertension in Chinese Hans

期刊

JOURNAL OF HYPERTENSION
卷 29, 期 1, 页码 70-75

出版社

LIPPINCOTT WILLIAMS & WILKINS
DOI: 10.1097/HJH.0b013e32833f60ab

关键词

diastolic blood pressure; hypertension; systolic blood pressure

资金

  1. Chinese Academy of Sciences [SIBS2008006]
  2. Major Projects of Knowledge Innovation Program [KSCX2-YW-R-116, KSCX1-YW-02]
  3. National Natural Science Foundation of China [30930081]
  4. Ministry of Science and Technology of China [2009AA022704, 2007AA02Z332]
  5. International Collaboration Program [2008DFA31960]
  6. MRC [MC_U106188470] Funding Source: UKRI
  7. Medical Research Council [MC_U106188470] Funding Source: researchfish

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Objectives Recent genome-wide association studies have identified a number of variants influencing blood pressure. We aimed to examine whether these associations can be replicated in Chinese. Methods We genotyped eight of these variants (in or near FGF5, CYP17A1, MTHFR, ZNF652, PLCD3, ATP2B1, c10orf107) in a population-based cohort of Chinese Hans (N=3210). Logistics regression and generalized linear analyses were applied to test for association of each variant with hypertension risk and blood pressure (BP), BMI, waistline and high-sensitivity C-reactive protein (hsCRP), respectively. Results Six variants showed directionally consistent association with blood pressure and risk of hypertension, of which four (FGF5, two in CYP17A1, MTHFR) reached significance. The associations were most pronounced for FGF-rs 16998073 [SBP: beta=1.97 mmHg/allele, P=0.0006; DBP: beta=0.95 mmHg/allele, P=0.0008, hypertension: odds ratio (OR) 1.36/allele, P=0.0001]. Effect size of FGF5-rs16998073 on SBP and hypertension were significantly more pronounced in Han Chinese compared to white Europeans. None of these variants was associated with BMI, waistline or hsCRP that are the well established risk factors for hypertension. The genetic risk score, calculated as the sum of BP-increasing alleles of FGF5-rs16998073, CYP17A1-rs11191548, CYP17A1-rs1004467 and MTHFR-rs17367504, was significantly associated with increased SBP (1.16 mmHg/allele, P=9.01E-5), DBP (0.51mmHg/allele, P=4.40E-4) and hypertension risk (OR=1.22/allele, P=2.74E-7). Conclusion Variants in or near FGF5, CYP17A1 and MTHFR contributed to variation in BP and hypertension risk. Effect sizes of these three loci tended to be larger in Chinese than in white Europeans, but more studies with larger sample size are required for a definitive conclusion. J Hypertens 29:70-75 (C) 2010 Wolters Kluwer Health | Lippincott Williams & Wilkins.

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Article Genetics & Heredity

Genome-wide association analyses define pathogenic signaling pathways and prioritize drug targets for IgA nephropathy

Krzysztof Kiryluk, Elena Sanchez-Rodriguez, Xu-Jie Zhou, Francesca Zanoni, Lili Liu, Nikol Mladkova, Atlas Khan, Maddalena Marasa, Jun Y. Zhang, Olivia Balderes, Simone Sanna-Cherchi, Andrew S. Bomback, Pietro A. Canetta, Gerald B. Appel, Jai Radhakrishnan, Hernan Trimarchi, Ben Sprangers, Daniel C. Cattran, Heather Reich, York Pei, Pietro Ravani, Kresimir Galesic, Dita Maixnerova, Vladimir Tesar, Benedicte Stengel, Marie Metzger, Guillaume Canaud, Nicolas Maillard, Francois Berthoux, Laureline Berthelot, Evangeline Pillebout, Renato Monteiro, Raoul Nelson, Robert J. Wyatt, William Smoyer, John Mahan, Al-Akash Samhar, Guillermo Hidalgo, Alejandro Quiroga, Patricia Weng, Raji Sreedharan, David Selewski, Keefe Davis, Mahmoud Kallash, Tetyana L. Vasylyeva, Michelle Rheault, Aftab Chishti, Daniel Ranch, Scott E. Wenderfer, Dmitry Samsonov, Donna J. Claes, Oleh Akchurin, Dimitrios Goumenos, Maria Stangou, Judit Nagy, Tibor Kovacs, Enrico Fiaccadori, Antonio Amoroso, Cristina Barlassina, Daniele Cusi, Lucia Del Vecchio, Giovanni Giorgio Battaglia, Monica Bodria, Emanuela Boer, Luisa Bono, Giuliano Boscutti, Gianluca Caridi, Francesca Lugani, GianMarco Ghiggeri, Rosanna Coppo, Licia Peruzzi, Vittoria Esposito, Ciro Esposito, Sandro Feriozzi, Rosaria Polci, Giovanni Frasca, Marco Galliani, Maurizio Garozzo, Adele Mitrotti, Loreto Gesualdo, Simona Granata, Gianluigi Zaza, Francesco Londrino, Riccardo Magistroni, Isabella Pisani, Andrea Magnano, Carmelita Marcantoni, Piergiorgio Messa, Renzo Mignani, Antonello Pani, Claudio Ponticelli, Dario Roccatello, Maurizio Salvadori, Erica Salvi, Domenico Santoro, Guido Gembillo, Silvana Savoldi, Donatella Spotti, Pasquale Zamboli, Claudia Izzi, Federico Alberici, Elisa Delbarba, Michal Florczak, Natalia Krata, Krzysztof Mucha, Leszek Paczek, Stanislaw Niemczyk, Barbara Moszczuk, Malgorzata Panczyk-Tomaszewska, Malgorzata Mizerska-Wasiak, Agnieszka Perkowska-Ptasinska, Teresa Baczkowska, Magdalena Durlik, Krzysztof Pawlaczyk, Przemyslaw Sikora, Marcin Zaniew, Dorota Kaminska, Magdalena Krajewska, Izabella Kuzmiuk-Glembin, Zbigniew Heleniak, Barbara Bullo-Piontecka, Tomasz Liberek, Alicja Debska-Slizien, Tomasz Hryszko, Anna Materna-Kiryluk, Monika Miklaszewska, Maria Szczepanska, Katarzyna Dyga, Edyta Machura, Katarzyna Siniewicz-Luzenczyk, Monika Pawlak-Bratkowska, Marcin Tkaczyk, Dariusz Runowski, Norbert Kwella, Dorota Drozdz, Ireneusz Habura, Florian Kronenberg, Larisa Prikhodina, David van Heel, Bertrand Fontaine, Chris Cotsapas, Cisca Wijmenga, Andre Franke, Vito Annese, Peter K. Gregersen, Sreeja Parameswaran, Matthew Weirauch, Leah Kottyan, John B. Harley, Hitoshi Suzuki, Ichiei Narita, Shin Goto, Hajeong Lee, Dong Ki Kim, Yon Su Kim, Jin-Ho Park, BeLong Cho, Murim Choi, Ans Van Wijk, Ana Huerta, Elisabet Ars, Jose Ballarin, Sigrid Lundberg, Bruno Vogt, Laila-Yasmin Mani, Yasar Caliskan, Jonathan Barratt, Thilini Abeygunaratne, Philip A. Kalra, Daniel P. Gale, Ulf Panzer, Thomas Rauen, Juergen Floege, Pascal Schlosser, Arif B. Ekici, Kai-Uwe Eckardt, Nan Chen, Jingyuan Xie, Richard P. Lifton, Ruth J. F. Loos, Eimear E. Kenny, Iuliana Ionita-Laza, Anna Koettgen, Bruce A. Julian, Jan Novak, Francesco Scolari, Hong Zhang, Ali G. Gharavi

Summary: Genome-wide association analyses have identified 30 risk loci for IgA nephropathy, a progressive form of kidney disease. Functional annotations of potential causal genes suggest inflammatory signaling pathways and cytokine ligand-receptor pairs as potential new drug targets. These findings provide valuable insights into the genetic basis of IgA nephropathy and offer potential avenues for developing therapeutic interventions.

NATURE GENETICS (2023)

Article Cardiac & Cardiovascular Systems

Oligogenic Architecture of Rare Noncoding Variants Distinguishes 4 Congenital Heart Disease Phenotypes

Mengyao Yu, Matthew Aguirre, Meiwen Jia, Ketrin Gjoni, Aldo Cordova-Palomera, Chad Munger, Dulguun Amgalan, X. Rosa Ma, Alexandre Pereira, Catherine Tcheandjieu, Christine Seidman, Jonathan Seidman, Martin Tristani-Firouzi, Wendy Chung, Elizabeth Goldmuntz, Deepak Srivastava, Ruth J. F. Loos, Nathalie Chami, Heather Cordell, Martina Dressen, Bertram Mueller-Myhsok, Harald Lahm, Markus Krane, Katherine S. Pollard, Jesse M. Engreitz, Sarah Gagliano A. Taliun, Bruce D. Gelb, James R. Priest

Summary: This study identified rare noncoding variants associated with specific types of congenital heart malformations and linked them to genes governing cardiac development. The results suggest that the genetic basis of congenital heart disease may be linked to rare variants outside protein-coding regions, and the risk for different types of congenital heart malformations is separate and independent.

CIRCULATION-GENOMIC AND PRECISION MEDICINE (2023)

Article Endocrinology & Metabolism

Elucidating pathways to pediatric obesity: a study evaluating obesity polygenic risk scores related to appetitive traits in children

Timothy J. Renier, Dabin Yeum, Jennifer A. Emond, Reina K. Lansigan, Grace A. Ballarino, Delaina D. Carlson, Ruth J. F. Loos, Diane Gilbert-Diamond

Summary: This study found an association between genetic obesity risk and appetitive traits in children, and appetitive traits partially mediated the association between genetic obesity risk and BMI.

INTERNATIONAL JOURNAL OF OBESITY (2023)

Article Genetics & Heredity

GWAS of random glucose in 476,326 individuals provide insights into diabetes pathophysiology, complications and treatment stratification

Vasiliki Lagou, Longda Jiang, Anna Ulrich, Liudmila Zudina, Karla Sofia Gutierrez Gonzalez, Zhanna Balkhiyarova, Alessia Faggian, Jared G. Maina, Shiqian Chen, Petar V. Todorov, Sodbo Sharapov, Alessia David, Letizia Marullo, Reedik Magi, Roxana-Maria Rujan, Emma Ahlqvist, Gudmar Thorleifsson, He Gao, Evangelos Evangelou, Beben Benyamin, Robert A. Scott, Aaron Isaacs, Jing Hua Zhao, Sara M. Willems, Toby Johnson, Christian Gieger, Harald Grallert, Christa Meisinger, Martina Mueller-Nurasyid, Rona J. Strawbridge, Anuj Goel, Denis Rybin, Eva Albrecht, Anne U. Jackson, Heather M. Stringham, Ivan R. Correa, Eric Farber-Eger, Valgerdur Steinthorsdottir, Andre G. Uitterlinden, Patricia B. Munroe, Morris J. Brown, Julian Schmidberger, Oddgeir Holmen, Barbara Thorand, Kristian Hveem, Tom Wilsgaard, Karen L. Mohlke, Zhe Wang, Aleksey Shmeliov, Marcel den Hoed, Ruth J. F. Loos, Wolfgang Kratzer, Mark Haenle, Wolfgang Koenig, Bernhard O. Boehm, Tricia M. Tan, Alejandra Tomas, Victoria Salem, Ines Barroso, Jaakko Tuomilehto, Michael Boehnke, Jose C. Florez, Anders Hamsten, Hugh Watkins, Inger Njolstad, H. -Erich Wichmann, Mark J. Caulfield, Kay-Tee Khaw, Cornelia M. van Duijn, Albert Hofman, Nicholas J. Wareham, Claudia Langenberg, John B. Whitfield, Nicholas G. Martin, Grant Montgomery, Chiara Scapoli, Ioanna Tzoulaki, Paul Elliott, Unnur Thorsteinsdottir, Kari Stefansson, Evan L. Brittain, Mark I. McCarthy, Philippe Froguel, Patrick M. Sexton, Denise Wootten, Leif Groop, Josee Dupuis, James B. Meigs, Giuseppe Deganutti, Ayse Demirkan, Tune H. Pers, Christopher A. Reynolds, Yurii S. Aulchenko, Marika A. Kaakinen, Ben Jones, Inga Prokopenko

Summary: GWAS meta-analysis of glucose measurements under nonstandardized conditions allows the discovery of new loci related to blood glucose levels and uncovers the important role of the gastrointestinal tract in glucose regulation. It also provides evidence for genetic stratification in individualized treatment and confirms the association between lung function and blood glucose regulation.

NATURE GENETICS (2023)

Review Environmental Sciences

PFAS Exposures and the Human Metabolome: A Systematic Review of Epidemiological Studies

Sandra India-Aldana, Meizhen Yao, Vishal Midya, Elena Colicino, Leda Chatzi, Jaime Chu, Chris Gennings, Dean P. Jones, Ruth J. F. Loos, Veronica W. Setiawan, Mathew Ryan Smith, Ryan W. Walker, Dinesh Barupal, Douglas I. Walker, Damaskini Valvi

Summary: There is an increasing interest in exploring the health effects of exposure to per- and polyfluoroalkyl substances (PFAS) through the examination of the human metabolome. This systematic review identified consistent associations between PFAS exposure and metabolomic signatures based on 28 observational studies. The most common PFAS exposure evaluated was legacy long-chain PFAS, and the associations were found between PFAS and various metabolites including amino acids, fatty acids, glycerophospholipids, and bile acids. These findings suggest that PFAS can disrupt lipid and amino acid metabolism, potentially affecting energy and cell membrane function.

CURRENT POLLUTION REPORTS (2023)

Article Cardiac & Cardiovascular Systems

Ancestral diversity in lipoprotein(a) studies helps address evidence gaps

Moa P. Lee, Sofia F. Dimos, Laura M. Raffield, Zhe Wang, Anna F. Ballou, Carolina G. Downie, Christopher H. Arehart, Adolfo Correa, Paul S. de Vries, Zhaohui Du, Christopher R. Gignoux, Penny Gordon-Larsen, Xiuqing Guo, Jeffrey Haessler, Annie Green Howard, Yao Hu, Helina Kassahun, Shia T. Kent, J. Antonio G. Lopez, Keri L. Monda, Kari E. North, Ulrike Peters, Michael H. Preuss, Stephen S. Rich, Shannon L. Rhodes, Jie Yao, Rina Yarosh, Michael Y. Tsai, Jerome Rotter, Charles L. Kooperberg, Ruth J. F. Loos, Christie Ballantyne, Christy L. Avery, Mariaelisa Graff

Summary: This study examined the genetic architecture and phenotypic effects of lipoprotein(a) (Lp(a)) using data from ancestrally diverse populations. It identified genome-wide significant loci associated with Lp(a) and constructed polygenic risk scores (PRS) that could accurately predict Lp(a) levels in different populations. The study also found associations between Lp(a) PRS and coronary atherosclerosis and ischaemic heart disease in Hispanic/Latino populations.

OPEN HEART (2023)

Letter Urology & Nephrology

Genome-Wide Polygenic Risk Score for CKD in Individuals with APOL1 High-Risk Genotypes

Ha My T. Vy, Steven G. Coca, Ashwin Sawant, Ankit Sakhuja, Orlando M. Gutierrez, Richard Cooper, Ruth J. F. Loos, Carol R. Horowitz, Ron Do, Girish N. Nadkarni

CLINICAL JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY (2023)

Article Cell Biology

Global Biobank analyses provide lessons for developing polygenic risk scores across diverse cohorts

Ying Wang, Shinichi Namba, Esteban Lopera, Sini Kerminen, Kristin Tsuo, Kristi Lall, Masahiro Kanai, Wei Zhou, Kuan-Han Wu, Marie-Julie Fave, Laxmi Bhatta, Philip Awadalla, Ben Brumpton, Patrick Deelen, Kristian Hveem, Valeria Lo Faro, Reedik Magi, Yoshinori Murakami, Serena Sanna, Jordan W. Smoller, Jasmina Uzunovic, Cristen Willer, Eric R. Gamazon, Nancy J. Cox, Ida Surakka, Yukinori Okada, Alicia R. Martin, Jibril Hirbo

Summary: This study utilized data from GBMI to explore methodological considerations and performance of PRS for 14 disease endpoints across global populations. The study provides lessons for PRS construction, evaluation, and interpretation and highlights the importance of PRS in the biobank-scale genomics era.

CELL GENOMICS (2023)

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