标题
Regulation of mammalian transcription and splicing by Nuclear RNAi
作者
关键词
-
出版物
NUCLEIC ACIDS RESEARCH
Volume 44, Issue 2, Pages 524-537
出版商
Oxford University Press (OUP)
发表日期
2015-11-27
DOI
10.1093/nar/gkv1305
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- How eukaryotic genes are transcribed
- (2016) Bryan J. Venters et al. CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY
- An overview of microRNAs
- (2015) Scott M. Hammond ADVANCED DRUG DELIVERY REVIEWS
- Regulation of Alternative Splicing Through Coupling with Transcription and Chromatin Structure
- (2015) Shiran Naftelberg et al. Annual Review of Biochemistry
- Functions of BET proteins in erythroid gene expression
- (2015) Aaron J. Stonestrom et al. BLOOD
- A chromatin code for alternative splicing involving a putative association between CTCF and HP1α proteins
- (2015) Eneritz Agirre et al. BMC BIOLOGY
- Single-Molecule Imaging Reveals that Argonaute Reshapes the Binding Properties of Its Nucleic Acid Guides
- (2015) William E. Salomon et al. CELL
- Argonautes team up to silence transposable elements in Arabidopsis
- (2015) C. J. Underwood et al. EMBO JOURNAL
- DICER/AGO-dependent epigenetic silencing of D4Z4 repeats enhanced by exogenous siRNA suggests mechanisms and therapies for FSHD
- (2015) Jong-Won Lim et al. HUMAN MOLECULAR GENETICS
- Argonaute 2 Binds Directly to tRNA Genes and Promotes Gene Repression incis
- (2015) Jessica L. Woolnough et al. MOLECULAR AND CELLULAR BIOLOGY
- Condensin I and II Complexes License Full Estrogen Receptor α-Dependent Enhancer Activation
- (2015) Wenbo Li et al. MOLECULAR CELL
- BET Bromodomain Inhibition Suppresses the Function of Hematopoietic Transcription Factors in Acute Myeloid Leukemia
- (2015) Jae-Seok Roe et al. MOLECULAR CELL
- The Paf1 complex represses small-RNA-mediated epigenetic gene silencing
- (2015) Katarzyna Maria Kowalik et al. NATURE
- Quantification of nascent transcription by bromouridine immunocapture nuclear run-on RT-qPCR
- (2015) Thomas C Roberts et al. Nature Protocols
- RNA-mediated epigenetic regulation of gene expression
- (2015) Daniel Holoch et al. NATURE REVIEWS GENETICS
- Towards a molecular understanding of microRNA-mediated gene silencing
- (2015) Stefanie Jonas et al. NATURE REVIEWS GENETICS
- From guide to target: molecular insights into eukaryotic RNA-interference machinery
- (2015) Jonathan J Ipsaro et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Importin-β facilitates nuclear import of human GW proteins and balances cytoplasmic gene silencing protein levels
- (2015) Daniel Schraivogel et al. NUCLEIC ACIDS RESEARCH
- Intramolecular circularization increases efficiency of RNA sequencing and enables CLIP-Seq of nuclear RNA from human cells
- (2015) Y. Chu et al. NUCLEIC ACIDS RESEARCH
- Cellular localization of long non-coding RNAs affects silencing by RNAi more than by antisense oligonucleotides
- (2015) Kim A. Lennox et al. NUCLEIC ACIDS RESEARCH
- Live cell imaging of duplex siRNA intracellular trafficking
- (2015) Markus Hirsch et al. NUCLEIC ACIDS RESEARCH
- Biochemical isolation of Argonaute protein complexes by Ago-APP
- (2015) Judith Hauptmann et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Identification of Small Activating RNAs that Enhance EndogenousOCT4Expression in Human Mesenchymal Stem Cells
- (2015) Ji Wang et al. STEM CELLS AND DEVELOPMENT
- RNAi and Heterochromatin Assembly
- (2015) Robert Martienssen et al. Cold Spring Harbor Perspectives in Biology
- From guide to target: molecular insights into eukaryotic RNA-interference machinery
- (2015) Jonathan J Ipsaro et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Modulation of Splicing by Single-Stranded Silencing RNAs
- (2015) Jing Liu et al. Nucleic Acid Therapeutics
- Reduced Expression of Argonaute 1, Argonaute 2 and TRBP Changes Levels and Intracellular Distribution of RNAi Factors
- (2015) Masayuki Matsui et al. Scientific Reports
- Release of human cytomegalovirus from latency by a KAP1/TRIM28 phosphorylation switch
- (2015) Benjamin Rauwel et al. eLife
- Long Non-Coding RNA Targeting and Transcriptional De-Repression
- (2015) Marc S. Weinberg et al. Nucleic Acid Therapeutics
- Digital Quantitation of Potential Therapeutic Target RNAs
- (2015) David W. Dodd et al. Nucleic Acid Therapeutics
- Transcriptional regulation mechanism mediated by miRNA–DNA•DNA triplex structure stabilized by Argonaute
- (2014) Julia D. Toscano-Garibay et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- Disrupting the Interaction of BRD4 with Diacetylated Twist Suppresses Tumorigenesis in Basal-like Breast Cancer
- (2014) Jian Shi et al. CANCER CELL
- Ago2 facilitates Rad51 recruitment and DNA double-strand break repair by homologous recombination
- (2014) Min Gao et al. CELL RESEARCH
- ARGONAUTE 6 bridges transposable element mRNA-derived siRNAs to the establishment of DNA methylation
- (2014) A. D. McCue et al. EMBO JOURNAL
- Specific but interdependent functions for Arabidopsis AGO4 and AGO6 in RNA-directed DNA methylation
- (2014) C.-G. Duan et al. EMBO JOURNAL
- Up-regulation of p21WAF1/CIP1by miRNAs and its implications in bladder cancer cells
- (2014) Chenghe Wang et al. FEBS LETTERS
- Nascent RNA interaction keeps PRC2 activity poised and in check
- (2014) Syuzo Kaneko et al. GENES & DEVELOPMENT
- Direct transcriptional regulation by nuclear microRNAs
- (2014) Marika Salmanidis et al. INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY
- Importin 8 Regulates the Transport of Mature MicroRNAs into the Cell Nucleus
- (2014) Yao Wei et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Safety and efficacy of drisapersen for the treatment of Duchenne muscular dystrophy (DEMAND II): an exploratory, randomised, placebo-controlled phase 2 study
- (2014) Thomas Voit et al. LANCET NEUROLOGY
- ZMYND11 links histone H3.3K36me3 to transcription elongation and tumour suppression
- (2014) Hong Wen et al. NATURE
- Analysis of nascent RNA identifies a unified architecture of initiation regions at mammalian promoters and enhancers
- (2014) Leighton J Core et al. NATURE GENETICS
- Analysis of nuclear RNA interference in human cells by subcellular fractionation and Argonaute loading
- (2014) Keith T Gagnon et al. Nature Protocols
- The rise of regulatory RNA
- (2014) Kevin V. Morris et al. NATURE REVIEWS GENETICS
- Regulation of microRNA biogenesis
- (2014) Minju Ha et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Human nuclear Dicer restricts the deleterious accumulation of endogenous double-stranded RNA
- (2014) Eleanor White et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- AGO2 and SETDB1 cooperate in promoter-targeted transcriptional silencing of the androgen receptor gene
- (2014) Sunwha Cho et al. NUCLEIC ACIDS RESEARCH
- Epigenetic Upregulation of Endogenous VEGF-A Reduces Myocardial Infarct Size in Mice
- (2014) Mikko P. Turunen et al. PLoS One
- The Roles of Individual Mammalian Argonautes in RNA Interference In Vivo
- (2014) Vera M. Ruda et al. PLoS One
- Argonaute-1 binds transcriptional enhancers and controls constitutive and alternative splicing in human cells
- (2014) M. Allo et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- DELLA protein functions as a transcriptional activator through the DNA binding of the INDETERMINATE DOMAIN family proteins
- (2014) H. Yoshida et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The role of antisense long noncoding RNA in small RNA-triggered gene activation
- (2014) Xizhe Zhang et al. RNA
- Cellular microRNAs up-regulate transcription via interaction with promoter TATA-box motifs
- (2014) Yijun Zhang et al. RNA
- RNAi Factors Are Present and Active in Human Cell Nuclei
- (2014) Keith T. Gagnon et al. Cell Reports
- The influence of Argonaute proteins on alternative RNA splicing
- (2014) Eric Batsché et al. Wiley Interdisciplinary Reviews-RNA
- Considerations when investigating lncRNA function in vivo
- (2014) Andrew R Bassett et al. eLife
- The MicroRNA Biology of the Mammalian Nucleus
- (2014) Thomas C Roberts Molecular Therapy-Nucleic Acids
- Non-coding RNAs and DNA methylation in plants
- (2014) Yuanyuan Zhao et al. National Science Review
- Molecular Mechanisms of RNA Interference
- (2013) Ross C. Wilson et al. Annual Review of Biophysics
- Argonaute and GW182 proteins: an effective alliance in gene silencing
- (2013) Janina Pfaff et al. BIOCHEMICAL SOCIETY TRANSACTIONS
- A nuclear perspective on RNAi pathways in metazoans
- (2013) Germano Cecere et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- Dynamic Integration of Splicing within Gene Regulatory Pathways
- (2013) Ulrich Braunschweig et al. CELL
- Sox proteins: regulators of cell fate specification and differentiation
- (2013) Y. Kamachi et al. DEVELOPMENT
- The rough endoplasmatic reticulum is a central nucleation site of siRNA-mediated RNA silencing
- (2013) Lukas Stalder et al. EMBO JOURNAL
- Transgenerational functions of small RNA pathways in controlling gene expression inC. elegans
- (2013) Thomas M Guérin et al. Epigenetics
- RNA-mediated gene activation
- (2013) Alan L Jiao et al. Epigenetics
- Two new and distinct roles for Drosophila Argonaute-2 in the nucleus: alternative pre-mRNA splicing and transcriptional repression
- (2013) J. M. Taliaferro et al. GENES & DEVELOPMENT
- Novel RNA oligonucleotide improves liver function and inhibits liver carcinogenesisin vivo
- (2013) Vikash Reebye et al. HEPATOLOGY
- RNA interference in the nucleus: roles for small RNAs in transcription, epigenetics and beyond
- (2013) Stephane E. Castel et al. NATURE REVIEWS GENETICS
- Argonaute proteins: functional insights and emerging roles
- (2013) Gunter Meister NATURE REVIEWS GENETICS
- Alternative splicing: a pivotal step between eukaryotic transcription and translation
- (2013) Alberto R. Kornblihtt et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Regulation of alternative splicing by local histone modifications: potential roles for RNA-guided mechanisms
- (2013) H.-L. Zhou et al. NUCLEIC ACIDS RESEARCH
- Differential involvement of E2A-corepressor interactions in distinct leukemogenic pathways
- (2013) Chien-Hung Gow et al. NUCLEIC ACIDS RESEARCH
- Promoter RNA links transcriptional regulation of inflammatory pathway genes
- (2013) Masayuki Matsui et al. NUCLEIC ACIDS RESEARCH
- Biogenesis, Turnover, and Mode of Action of Plant MicroRNAs
- (2013) K. Rogers et al. PLANT CELL
- Structural features of Argonaute-GW182 protein interactions
- (2013) J. Pfaff et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A direct role for small non-coding RNAs in DNA damage response
- (2013) Fabrizio d’Adda di Fagagna TRENDS IN CELL BIOLOGY
- A Chemical View of Oligonucleotides for Exon Skipping and Related Drug Applications
- (2013) Peter Järver et al. Nucleic Acid Therapeutics
- Characterization of the p53 Cistrome – DNA Binding Cooperativity Dissects p53's Tumor Suppressor Functions
- (2013) Katharina Schlereth et al. PLoS Genetics
- Ago1 Interacts with RNA Polymerase II and Binds to the Promoters of Actively Transcribed Genes in Human Cancer Cells
- (2013) Vera Huang et al. PLoS Genetics
- The Structure of Human Argonaute-2 in Complex with miR-20a
- (2012) Elad Elkayam et al. CELL
- Single-Stranded siRNAs Activate RNAi in Animals
- (2012) Walt F. Lima et al. CELL
- Cell-Context Dependent TCF/LEF Expression and Function: Alternative Tales of Repression, De-Repression and Activation Potentials
- (2012) Catherine D. Mao et al. CRITICAL REVIEWS IN EUKARYOTIC GENE EXPRESSION
- DNA-RNA hybrid formation mediates RNAi-directed heterochromatin formation
- (2012) Mina Nakama et al. GENES TO CELLS
- A SWI/SNF Chromatin-Remodeling Complex Acts in Noncoding RNA-Mediated Transcriptional Silencing
- (2012) Yongyou Zhu et al. MOLECULAR CELL
- The long-range interaction landscape of gene promoters
- (2012) Amartya Sanyal et al. NATURE
- Site-specific DICER and DROSHA RNA products control the DNA-damage response
- (2012) Sofia Francia et al. NATURE
- Amplification of siRNA in Caenorhabditis elegans generates a transgenerational sequence-targeted histone H3 lysine 9 methylation footprint
- (2012) Sam Guoping Gu et al. NATURE GENETICS
- Argonaute proteins couple chromatin silencing to alternative splicing
- (2012) Maya Ameyar-Zazoua et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- A small RNA response at DNA ends in Drosophila
- (2012) Katharina M. Michalik et al. NUCLEIC ACIDS RESEARCH
- Roles of DICER-LIKE and ARGONAUTE Proteins in TAS-Derived Small Interfering RNA-Triggered DNA Methylation
- (2012) L. Wu et al. PLANT PHYSIOLOGY
- Human TNRC6A is an Argonaute-navigator protein for microRNA-mediated gene silencing in the nucleus
- (2012) K. Nishi et al. RNA
- The Crystal Structure of Human Argonaute2
- (2012) N. T. Schirle et al. SCIENCE
- p53 Regulates Cell Cycle and MicroRNAs to Promote Differentiation of Human Embryonic Stem Cells
- (2012) Abhinav K. Jain et al. PLOS BIOLOGY
- Small RNA-Mediated Epigenetic Myostatin Silencing
- (2012) Thomas C Roberts et al. Molecular Therapy-Nucleic Acids
- Thermodynamic Control of Small RNA-Mediated Gene Silencing
- (2012) Kumiko Ui-Tei et al. Frontiers in Genetics
- CTCF function is modulated by neighboring DNA binding factors
- (2011) Oliver Weth et al. Biochemistry and Cell Biology
- Clonal Rett Syndrome cell lines to test compounds for activation of wild-type MeCP2 expression
- (2011) Dongbo Yu et al. BIOORGANIC & MEDICINAL CHEMISTRY LETTERS
- YY1 Tethers Xist RNA to the Inactive X Nucleation Center
- (2011) Yesu Jeon et al. CELL
- Transforming ligands into transcriptional regulators: building blocks for bifunctional molecules
- (2011) Jonas W. Højfeldt et al. CHEMICAL SOCIETY REVIEWS
- Binding Site Specificity and Factor Redundancy in Activator Protein-1-driven Human Papillomavirus Chromatin-dependent Transcription
- (2011) Wei-Ming Wang et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Multisubunit RNA polymerases IV and V: purveyors of non-coding RNA for plant gene silencing
- (2011) Jeremy R. Haag et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Expanding the action of duplex RNAs into the nucleus: redirecting alternative splicing
- (2011) Jing Liu et al. NUCLEIC ACIDS RESEARCH
- Upregulation of Cyclin B1 by miRNA and its implications in cancer
- (2011) Vera Huang et al. NUCLEIC ACIDS RESEARCH
- Transcriptional gene silencing in mammalian cells by miRNA mimics that target gene promoters
- (2011) Scott T. Younger et al. NUCLEIC ACIDS RESEARCH
- Nuclear RNAi maintains heritable gene silencing in Caenorhabditis elegans
- (2011) N. O. Burton et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Nuclear and cytoplasmic localization of neural stem cell microRNAs
- (2011) C. D. Jeffries et al. RNA
- A Pre-mRNA–Associating Factor Links Endogenous siRNAs to Chromatin Regulation
- (2011) Kirk B. Burkhart et al. PLoS Genetics
- RITS-connecting transcription, RNA interference, and heterochromatin assembly in fission yeast
- (2011) Kevin M. Creamer et al. Wiley Interdisciplinary Reviews-RNA
- Small RNA and transcriptional upregulation
- (2011) Victoria Portnoy et al. Wiley Interdisciplinary Reviews-RNA
- Prognostic Value and Function of KLF4 in Prostate Cancer: RNAa and Vector-Mediated Overexpression Identify KLF4 as an Inhibitor of Tumor Cell Growth and Migration
- (2010) J. Wang et al. CANCER RESEARCH
- Dicer-Independent Primal RNAs Trigger RNAi and Heterochromatin Formation
- (2010) Mario Halic et al. CELL
- Activation of LDL Receptor Expression by Small RNAs Complementary to a Noncoding Transcript that Overlaps the LDLR Promoter
- (2010) Masayuki Matsui et al. CHEMISTRY & BIOLOGY
- Small regulatory RNAs inhibit RNA polymerase II during the elongation phase of transcription
- (2010) Shouhong Guang et al. NATURE
- Involvement of argonaute proteins in gene silencing and activation by RNAs complementary to a non-coding transcript at the progesterone receptor promoter
- (2010) Yongjun Chu et al. NUCLEIC ACIDS RESEARCH
- Effect of chemical modifications on modulation of gene expression by duplex antigene RNAs that are complementary to non-coding transcripts at gene promoters
- (2010) Jonathan K. Watts et al. NUCLEIC ACIDS RESEARCH
- RNAa Is Conserved in Mammalian Cells
- (2010) Vera Huang et al. PLoS One
- Deep Sequencing of Human Nuclear and Cytoplasmic Small RNAs Reveals an Unexpectedly Complex Subcellular Distribution of miRNAs and tRNA 3′ Trailers
- (2010) Jian-You Liao et al. PLoS One
- Importin 8 Is a Gene Silencing Factor that Targets Argonaute Proteins to Distinct mRNAs
- (2009) Lasse Weinmann et al. CELL
- Promoter-specific transcriptional interference and c-myc gene silencing by siRNAs in human cells
- (2009) Sara Napoli et al. EMBO JOURNAL
- p53 Binding to Nucleosomal DNA Depends on the Rotational Positioning of DNA Response Element
- (2009) Geetaram Sahu et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Distinct Argonaute-Mediated 22G-RNA Pathways Direct Genome Surveillance in the C. elegans Germline
- (2009) Weifeng Gu et al. MOLECULAR CELL
- Control of alternative splicing through siRNA-mediated transcriptional gene silencing
- (2009) Mariano Alló et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Promoter targeted small RNAs induce long-term transcriptional gene silencing in human cells
- (2009) Peter G. Hawkins et al. NUCLEIC ACIDS RESEARCH
- Intended transcriptional silencing with siRNA results in gene repression through sequence-specific off-targeting
- (2009) J. Moses et al. RNA
- Noncoding Transcription by RNA Polymerase Pol IVb/Pol V Mediates Transcriptional Silencing of Overlapping and Adjacent Genes
- (2008) Andrzej T. Wierzbicki et al. CELL
- Chromatin Adaptor Brd4 Modulates E2 Transcription Activity and Protein Stability
- (2008) A-Young Lee et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Antitumor effect of dsRNA-induced p21WAF1/CIP1 gene activation in human bladder cancer cells
- (2008) Z. Chen et al. MOLECULAR CANCER THERAPEUTICS
- CDYL Bridges REST and Histone Methyltransferases for Gene Repression and Suppression of Cellular Transformation
- (2008) Peter Mulligan et al. MOLECULAR CELL
- Structure of an argonaute silencing complex with a seed-containing guide DNA and target RNA duplex
- (2008) Yanli Wang et al. NATURE
- GW182 interaction with Argonaute is essential for miRNA-mediated translational repression and mRNA decay
- (2008) Ana Eulalio et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Antisense transcripts are targets for activating small RNAs
- (2008) Jacob C Schwartz et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Fluorescence correlation spectroscopy and fluorescence cross-correlation spectroscopy reveal the cytoplasmic origination of loaded nuclear RISC in vivo in human cells
- (2008) Thomas Ohrt et al. NUCLEIC ACIDS RESEARCH
- MicroRNA-directed transcriptional gene silencing in mammalian cells
- (2008) D. H. Kim et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- MicroRNA-373 induces expression of genes with complementary promoter sequences
- (2008) R. F. Place et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A multifunctional human Argonaute2-specific monoclonal antibody
- (2008) S. Rudel et al. RNA
- An Argonaute Transports siRNAs from the Cytoplasm to the Nucleus
- (2008) S. Guang et al. SCIENCE
- Bidirectional Transcription Directs Both Transcriptional Gene Activation and Suppression in Human Cells
- (2008) Kevin V. Morris et al. PLoS Genetics
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now