The Complexity and Diversity of the Pathogenicity Locus in Clostridium difficile Clade 5

Multistate Point-Prevalence Survey of Health Care–Associated Infections

(2014) Shelley S. Magill et al.   NEW ENGLAND JOURNAL OF MEDICINE

Characterization of swine isolates of Clostridium difficile in Spain: A potential source of epidemic multidrug resistant strains?

(2013) Teresa Peláez et al.   ANAEROBE

Prevalence of Gastrointestinal Clostridium difficile Carriage in Australian Sheep and Lambs

(2013) Daniel R. Knight et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Cross-Sectional Study Reveals High Prevalence of Clostridium difficile Non-PCR Ribotype 078 Strains in Australian Veal Calves at Slaughter

(2013) Daniel R. Knight et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Relationship Between Bacterial Strain Type, Host Biomarkers, and Mortality in Clostridium difficile Infection

(2013) A. Sarah Walker et al.   CLINICAL INFECTIOUS DISEASES

Evolutionary History of the Clostridium difficile Pathogenicity Locus

(2013) Kate E. Dingle et al.   Genome Biology and Evolution

Identification and Characterization of Clostridium sordellii Toxin Gene Regulator

(2013) A. R. Sirigi Reddy et al.   JOURNAL OF BACTERIOLOGY

Presence of Clostridium difficile PCR ribotype clusters related to 033, 078 and 045 in diarrhoeic calves in Germany

(2013) A. Schneeberg et al.   JOURNAL OF MEDICAL MICROBIOLOGY

Clinical and microbiological features of Clostridium difficile infections in France: The ICD-RAISIN 2009 national survey

(2013) C. Eckert et al.   MEDECINE ET MALADIES INFECTIEUSES

Horizontal gene transfer converts non-toxigenic Clostridium difficile strains into toxin producers

(2013) Michael S.M. Brouwer et al.   Nature Communications

Clostridium difficile 027/BI/NAP1 Encodes a Hypertoxic and Antigenically Variable Form of TcdB

(2013) Jordi M. Lanis et al.   PLoS Pathogens

Prevalence and distribution of Clostridium difficile PCR ribotypes in cats and dogs from animal shelters in Thuringia, Germany

(2012) Alexander Schneeberg et al.   ANAEROBE

Precise Manipulation of the Clostridium difficile Chromosome Reveals a Lack of Association between thetcdCGenotype and Toxin Production

(2012) Stephen T. Cartman et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Recombinational Switching of the Clostridium difficile S-Layer and a Novel Glycosylation Gene Cluster Revealed by Large-Scale Whole-Genome Sequencing

(2012) Kate E. Dingle et al.   JOURNAL OF INFECTIOUS DISEASES

Macro and Micro Diversity of Clostridium difficile Isolates from Diverse Sources and Geographical Locations

(2012) Richard A. Stabler et al.   PLoS One

TcdC Does Not Significantly Repress Toxin Expression in Clostridium difficile 630ΔErm

(2012) Dennis Bakker et al.   PLoS One

An Integrated Pipeline for de Novo Assembly of Microbial Genomes

(2012) Andrew Tritt et al.   PLoS One

Microevolutionary analysis of Clostridium difficile genomes to investigate transmission

(2012) Xavier Didelot et al.   GENOME BIOLOGY

Super toxins from a super bug: structure and function ofClostridium difficiletoxins

(2011) Abigail H. Davies et al.   BIOCHEMICAL JOURNAL

BIGSdb: Scalable analysis of bacterial genome variation at the population level

(2011) Keith A Jolley et al.   BMC BIOINFORMATICS

Reannotation of the genome sequence of Clostridium difficile strain 630

(2011) M. Monot et al.   JOURNAL OF MEDICAL MICROBIOLOGY

New types of toxin A-negative, toxin B-positive strains among clinical isolates of Clostridium difficile in Australia

(2011) B. Elliott et al.   JOURNAL OF MEDICAL MICROBIOLOGY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Clinical Clostridium difficile: Clonality and Pathogenicity Locus Diversity

(2011) Kate E. Dingle et al.   PLoS One

The Anti-Sigma Factor TcdC Modulates Hypervirulence in an Epidemic BI/NAP1/027 Clinical Isolate of Clostridium difficile

(2011) Glen P. Carter et al.   PLoS Pathogens

Clostridium difficile toxinotype XI (A-B-) exhibits unique arrangement of PaLoc and its upstream region

(2010) Barbara Geric Stare et al.   ANAEROBE

Clostridium difficile infection in Europe: a hospital-based survey

(2010) Martijn P Bauer et al.   LANCET

Evolutionary dynamics of Clostridium difficile over short and long time scales

(2010) M. He et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacteremia with a large clostridial toxin-negative, binary toxin-positive strain of Clostridium difficile

(2009) Briony Elliott et al.   ANAEROBE

Typing Clostridium difficile strains based on tandem repeat sequences

(2009) N HENNING ZaiSS et al.   BMC MICROBIOLOGY

Multilocus Sequence Typing ofClostridium difficile

(2009) David Griffiths et al.   JOURNAL OF CLINICAL MICROBIOLOGY

DNAPlotter: circular and linear interactive genome visualization

(2008) T. Carver et al.   BIOINFORMATICS

Emergence ofClostridium difficileInfection Due to a New Hypervirulent Strain, Polymerase Chain Reaction Ribotype 078

(2008) Abraham Goorhuis et al.   CLINICAL INFECTIOUS DISEASES

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

Clostridium difficile Toxinotype V, Ribotype 078, in Animals and Humans

(2008) M. Rupnik et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Isolation of Clostridium difficile from food animals in Slovenia

(2008) T. Pirs et al.   JOURNAL OF MEDICAL MICROBIOLOGY

Accurate whole human genome sequencing using reversible terminator chemistry

(2008) David R. Bentley et al.   NATURE

The Vienna RNA Websuite

(2008) A. R. Gruber et al.   NUCLEIC ACIDS RESEARCH