DNA methylome profiling beyond promoters - taking an epigenetic snapshot of the breast tumor microenvironment
出版年份 2014 全文链接
标题
DNA methylome profiling beyond promoters - taking an epigenetic snapshot of the breast tumor microenvironment
作者
关键词
-
出版物
FEBS Journal
Volume 282, Issue 9, Pages 1801-1814
出版商
Wiley
发表日期
2014-10-21
DOI
10.1111/febs.13125
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Genome-wide methylation patterns provide insight into differences in breast tumor biology between American women of African and European ancestry
- (2015) Christine B. Ambrosone et al. Oncotarget
- Comprehensive interrogation of CpG island methylation in the gene encoding COMT, a key estrogen and catecholamine regulator
- (2014) Theresa Swift-Scanlan et al. BMC Medical Genomics
- Candidate Luminal B Breast Cancer Genes Identified by Genome, Gene Expression and DNA Methylation Profiling
- (2014) Stéphanie Cornen et al. PLoS One
- Quantitative reconstruction of leukocyte subsets using DNA methylation
- (2014) William P Accomando et al. GENOME BIOLOGY
- Exploring genome wide bisulfite sequencing for DNA methylation analysis in livestock: a technical assessment
- (2014) Rachael Doherty et al. Frontiers in Genetics
- Non-canonical functions of the DNA methylome in gene regulation
- (2013) James P. Reddington et al. BIOCHEMICAL JOURNAL
- Intragenic DNA methylation in transcriptional regulation, normal differentiation and cancer
- (2013) Marta Kulis et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- The presence of programmed death 1 (PD-1)-positive tumor-infiltrating lymphocytes is associated with poor prognosis in human breast cancer
- (2013) S. Muenst et al. BREAST CANCER RESEARCH AND TREATMENT
- Interplay between the Cancer Genome and Epigenome
- (2013) Hui Shen et al. CELL
- Intragenic DNA methylation modulates alternative splicing by recruiting MeCP2 to promote exon recognition
- (2013) Alika K Maunakea et al. CELL RESEARCH
- Common gene pathways and families altered by DNA methylation in breast and prostate cancers
- (2013) Tanya K Day et al. ENDOCRINE-RELATED CANCER
- Blood-based profiles of DNA methylation predict the underlying distribution of cell types
- (2013) Devin C Koestler et al. Epigenetics
- GC skew at the 5' and 3' ends of human genes links R-loop formation to epigenetic regulation and transcription termination
- (2013) P. A. Ginno et al. GENOME RESEARCH
- De novo DNA demethylation and noncoding transcription define active intergenic regulatory elements
- (2013) F. Schlesinger et al. GENOME RESEARCH
- The Function of Intragenic DNA Methylation: Insights from Insect Epigenomes
- (2013) B. G. Hunt et al. INTEGRATIVE AND COMPARATIVE BIOLOGY
- DNA Methylation and Cancer Diagnosis
- (2013) Yannick Delpu et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- CD4+ follicular helper T cell infiltration predicts breast cancer survival
- (2013) Chunyan Gu-Trantien et al. JOURNAL OF CLINICAL INVESTIGATION
- Prognostic and Predictive Value of Tumor-Infiltrating Lymphocytes in a Phase III Randomized Adjuvant Breast Cancer Trial in Node-Positive Breast Cancer Comparing the Addition of Docetaxel to Doxorubicin With Doxorubicin-Based Chemotherapy: BIG 02-98
- (2013) Sherene Loi et al. JOURNAL OF CLINICAL ONCOLOGY
- BCL-2 Hypermethylation Is a Potential Biomarker of Sensitivity to Antimitotic Chemotherapy in Endocrine-Resistant Breast Cancer
- (2013) A. Stone et al. MOLECULAR CANCER THERAPEUTICS
- Influence of tumour micro-environment heterogeneity on therapeutic response
- (2013) Melissa R. Junttila et al. NATURE
- Microenvironmental regulation of tumor progression and metastasis
- (2013) Daniela F Quail et al. NATURE MEDICINE
- DNA methylation: roles in mammalian development
- (2013) Zachary D. Smith et al. NATURE REVIEWS GENETICS
- DNA methylation arrays as surrogate measures of cell mixture distribution
- (2012) Eugene Houseman et al. BMC BIOINFORMATICS
- Methylation of O 6-methylguanine-DNA methyltransferase (MGMT) promoter gene in triple-negative breast cancer patients
- (2012) Caterina Fumagalli et al. BREAST CANCER RESEARCH AND TREATMENT
- Hypomethylation of LINE-1 in primary tumor has poor prognosis in young breast cancer patients: a retrospective cohort study
- (2012) Anneke Q. van Hoesel et al. BREAST CANCER RESEARCH AND TREATMENT
- Association of large noncoding RNA HOTAIR expression and its downstream intergenic CpG island methylation with survival in breast cancer
- (2012) Lingeng Lu et al. BREAST CANCER RESEARCH AND TREATMENT
- Cancer Epigenetics: From Mechanism to Therapy
- (2012) Mark A. Dawson et al. CELL
- A Comprehensive Analysis of Human Gene Expression Profiles Identifies Stromal Immunoglobulin C as a Compatible Prognostic Marker in Human Solid Tumors
- (2012) M. Schmidt et al. CLINICAL CANCER RESEARCH
- Conserved Intergenic Elements and DNA Methylation Cooperate to Regulate Transcription at theil17Locus
- (2012) Rajan M. Thomas et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Comprehensive molecular portraits of human breast tumours
- (2012) Daniel C. Koboldt et al. NATURE
- Long-Range Autocorrelations of CpG Islands in the Human Genome
- (2012) Benjamin Koester et al. PLoS One
- Differential DNA Methylation in Purified Human Blood Cells: Implications for Cell Lineage and Studies on Disease Susceptibility
- (2012) Lovisa E. Reinius et al. PLoS One
- Cell-Type Specific DNA Methylation Patterns Define Human Breast Cellular Identity
- (2012) Petr Novak et al. PLoS One
- A Comparison of the Whole Genome Approach of MeDIP-Seq to the Targeted Approach of the Infinium HumanMethylation450 BeadChip® for Methylome Profiling
- (2012) Christine Clark et al. PLoS One
- Treg Cells in Cancer: A Case of Multiple Personality Disorder
- (2012) P. D. Bos et al. Science Translational Medicine
- What are regulatory T cells (Treg) regulating in cancer and why?
- (2012) Theresa L. Whiteside SEMINARS IN CANCER BIOLOGY
- CG methylation
- (2012) Charles Vinson et al. Epigenomics
- The split nature of tumor-infiltrating leukocytes
- (2012) Telma Lança et al. OncoImmunology
- Cancer-associated adipocytes promotes breast tumor radioresistance
- (2011) Ludivine Bochet et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- The tumor microenvironment modulates tamoxifen resistance in breast cancer: a role for soluble stromal factors and fibronectin through β1 integrin
- (2011) Osvaldo Pontiggia et al. BREAST CANCER RESEARCH AND TREATMENT
- Neutrophil/lymphocyte ratio predicts chemotherapy outcomes in patients with advanced colorectal cancer
- (2011) W Chua et al. BRITISH JOURNAL OF CANCER
- Intragenic DNA methylation: implications of this epigenetic mechanism for cancer research
- (2011) N Shenker et al. BRITISH JOURNAL OF CANCER
- Genome-Wide DNA Methylation Profiling of CpG Islands in Breast Cancer Identifies Novel Genes Associated with Tumorigenicity
- (2011) V. K. Hill et al. CANCER RESEARCH
- Genome-wide Methylation Analysis Identifies Genes Specific to Breast Cancer Hormone Receptor Status and Risk of Recurrence
- (2011) M. J. Fackler et al. CANCER RESEARCH
- DNA methylation profiling reveals a predominant immune component in breast cancers
- (2011) Sarah Dedeurwaerder et al. EMBO Molecular Medicine
- Regulation of mammalian DNA methyltransferases: a route to new mechanisms
- (2011) Hélène Denis et al. EMBO REPORTS
- Epigenetic quantification of tumor-infiltrating T-lymphocytes
- (2011) Jalid Sehouli et al. Epigenetics
- CpG islands and the regulation of transcription
- (2011) A. M. Deaton et al. GENES & DEVELOPMENT
- Cell type-specific DNA methylation at intragenic CpG islands in the immune system
- (2011) A. M. Deaton et al. GENOME RESEARCH
- Demethylation of the FOXP3 gene in human melanoma cells precludes the use of this epigenetic mark for quantification of Tregs in unseparated melanoma samples
- (2011) Sophie Lucas et al. INTERNATIONAL JOURNAL OF CANCER
- Tumor-Infiltrating CD8+ Lymphocytes Predict Clinical Outcome in Breast Cancer
- (2011) Sahar M.A. Mahmoud et al. JOURNAL OF CLINICAL ONCOLOGY
- Preparation of reduced representation bisulfite sequencing libraries for genome-scale DNA methylation profiling
- (2011) Hongcang Gu et al. Nature Protocols
- Evaluation of the Infinium Methylation 450K technology
- (2011) Sarah Dedeurwaerder et al. Epigenomics
- Leukocyte Complexity Predicts Breast Cancer Survival and Functionally Regulates Response to Chemotherapy
- (2011) David G. DeNardo et al. Cancer Discovery
- DNA methylation in stem cell renewal and multipotency
- (2011) María Berdasco et al. Stem Cell Research & Therapy
- Epigenetic Regulation of Cell Type–Specific Expression Patterns in the Human Mammary Epithelium
- (2011) Reo Maruyama et al. PLoS Genetics
- Macrophages, innate immunity and cancer: balance, tolerance, and diversity
- (2010) Alberto Mantovani et al. CURRENT OPINION IN IMMUNOLOGY
- Regulation of IGF2 transcript and protein expression by altered methylation in breast cancer
- (2010) Preetha J. Shetty et al. JOURNAL OF CANCER RESEARCH AND CLINICAL ONCOLOGY
- CD20+ B Cells: The Other Tumor-Infiltrating Lymphocytes
- (2010) B. H. Nelson JOURNAL OF IMMUNOLOGY
- DNA methylation patterns in luminal breast cancers differ from non-luminal subtypes and can identify relapse risk independent of other clinical variables
- (2010) Sitharthan Kamalakaran et al. Molecular Oncology
- Methylation profiling with a panel of cancer related genes: Association with estrogen receptor, TP53 mutation status and expression subtypes in sporadic breast cancer
- (2010) Jo Anders Rønneberg et al. Molecular Oncology
- B-cell-derived lymphotoxin promotes castration-resistant prostate cancer
- (2010) Massimo Ammirante et al. NATURE
- Conserved role of intragenic DNA methylation in regulating alternative promoters
- (2010) Alika K. Maunakea et al. NATURE
- Macrophage plasticity and interaction with lymphocyte subsets: cancer as a paradigm
- (2010) Subhra K Biswas et al. NATURE IMMUNOLOGY
- A mobile threat to genome stability: The impact of non-LTR retrotransposons upon the human genome
- (2010) Miriam K. Konkel et al. SEMINARS IN CANCER BIOLOGY
- Promoter CpG island hypermethylation during breast cancer progression
- (2010) So Yeon Park et al. VIRCHOWS ARCHIV
- Role of stromal myofibroblasts in invasive breast cancer: stromal expression of alpha-smooth muscle actin correlates with worse clinical outcome
- (2010) Masako Yamashita et al. Breast Cancer
- Hypomethylation of repeated DNA sequences in cancer
- (2010) Jason P Ross et al. Epigenomics
- Quantitative DNA Methylation Analysis of FOXP3 as a New Method for Counting Regulatory T Cells in Peripheral Blood and Solid Tissue
- (2009) G. Wieczorek et al. CANCER RESEARCH
- CpG hypomethylation of MDR1 gene in tumor and serum of invasive ductal breast carcinoma patients
- (2009) Gayatri Sharma et al. CLINICAL BIOCHEMISTRY
- Cancer-associated fibroblasts and tumor growth – bystanders turning into key players
- (2009) Arne Östman et al. CURRENT OPINION IN GENETICS & DEVELOPMENT
- Tumor-Associated Lymphocytes As an Independent Predictor of Response to Neoadjuvant Chemotherapy in Breast Cancer
- (2009) Carsten Denkert et al. JOURNAL OF CLINICAL ONCOLOGY
- Human DNA methylomes at base resolution show widespread epigenomic differences
- (2009) Ryan Lister et al. NATURE
- Lineage-Specific Promoter DNA Methylation Patterns Segregate Adult Progenitor Cell Types
- (2009) Anita L. Sørensen et al. STEM CELLS AND DEVELOPMENT
- Agglomerative Epigenetic Aberrations Are a Common Event in Human Breast Cancer
- (2008) P. Novak et al. CANCER RESEARCH
- The Humoral Immune System Has a Key Prognostic Impact in Node-Negative Breast Cancer
- (2008) M. Schmidt et al. CANCER RESEARCH
- Biological Processes Associated with Breast Cancer Clinical Outcome Depend on the Molecular Subtypes
- (2008) C. Desmedt et al. CLINICAL CANCER RESEARCH
- Genome-wide mapping and characterization of hypomethylated sites in human tissues and breast cancer cell lines
- (2008) Y.-J. Shann et al. GENOME RESEARCH
- Somatically acquired hypomethylation of IGF2 in breast and colorectal cancer
- (2008) Yoko Ito et al. HUMAN MOLECULAR GENETICS
- Stromal gene expression predicts clinical outcome in breast cancer
- (2008) Greg Finak et al. NATURE MEDICINE
- Cell type-specific DNA methylation patterns in the human breast
- (2008) N. Bloushtain-Qimron et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now